co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G30210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071289: cellular response to nickel ion	0.00E+00
2	GO:0009611: response to wounding	2.07E-06
3	GO:0010200: response to chitin	3.26E-06
4	GO:2000280: regulation of root development	3.18E-05
5	GO:0006680: glucosylceramide catabolic process	4.45E-05
6	GO:0006741: NADP biosynthetic process	1.10E-04
7	GO:0009695: jasmonic acid biosynthetic process	1.17E-04
8	GO:0031408: oxylipin biosynthetic process	1.30E-04
9	GO:0019674: NAD metabolic process	1.89E-04
10	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.89E-04
11	GO:0080168: abscisic acid transport	1.89E-04
12	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.89E-04
13	GO:0010193: response to ozone	2.76E-04
14	GO:0010371: regulation of gibberellin biosynthetic process	2.78E-04
15	GO:0033014: tetrapyrrole biosynthetic process	2.78E-04
16	GO:0019363: pyridine nucleotide biosynthetic process	2.78E-04
17	GO:0035556: intracellular signal transduction	3.40E-04
18	GO:0045727: positive regulation of translation	3.73E-04
19	GO:0034440: lipid oxidation	3.73E-04
20	GO:0009247: glycolipid biosynthetic process	4.75E-04
21	GO:0045487: gibberellin catabolic process	4.75E-04
22	GO:0009737: response to abscisic acid	6.01E-04
23	GO:0080086: stamen filament development	6.94E-04
24	GO:0006401: RNA catabolic process	8.11E-04
25	GO:0006955: immune response	8.11E-04
26	GO:0051707: response to other organism	8.29E-04
27	GO:0019375: galactolipid biosynthetic process	9.32E-04
28	GO:2000070: regulation of response to water deprivation	9.32E-04
29	GO:0009753: response to jasmonic acid	1.11E-03
30	GO:0006783: heme biosynthetic process	1.19E-03
31	GO:0009651: response to salt stress	1.32E-03
32	GO:0006779: porphyrin-containing compound biosynthetic process	1.32E-03
33	GO:0006782: protoporphyrinogen IX biosynthetic process	1.47E-03
34	GO:0055062: phosphate ion homeostasis	1.47E-03
35	GO:0018105: peptidyl-serine phosphorylation	1.58E-03
36	GO:0010015: root morphogenesis	1.61E-03
37	GO:0050826: response to freezing	1.92E-03
38	GO:0018107: peptidyl-threonine phosphorylation	1.92E-03
39	GO:0009790: embryo development	2.23E-03
40	GO:0009901: anther dehiscence	2.25E-03
41	GO:0009617: response to bacterium	3.13E-03
42	GO:0009686: gibberellin biosynthetic process	3.33E-03
43	GO:0040007: growth	3.33E-03
44	GO:0001944: vasculature development	3.33E-03
45	GO:0048443: stamen development	3.53E-03
46	GO:0048653: anther development	3.93E-03
47	GO:0006970: response to osmotic stress	4.35E-03
48	GO:0048544: recognition of pollen	4.35E-03
49	GO:0009749: response to glucose	4.56E-03
50	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.77E-03
51	GO:0046777: protein autophosphorylation	5.35E-03
52	GO:0019760: glucosinolate metabolic process	5.45E-03
53	GO:0009639: response to red or far red light	5.45E-03
54	GO:0006468: protein phosphorylation	5.71E-03
55	GO:0010027: thylakoid membrane organization	6.15E-03
56	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	6.39E-03
57	GO:0010029: regulation of seed germination	6.39E-03
58	GO:0009816: defense response to bacterium, incompatible interaction	6.39E-03
59	GO:0015995: chlorophyll biosynthetic process	6.89E-03
60	GO:0016049: cell growth	7.14E-03
61	GO:0009751: response to salicylic acid	7.27E-03
62	GO:0009408: response to heat	7.38E-03
63	GO:0045087: innate immune response	8.71E-03
64	GO:0009873: ethylene-activated signaling pathway	9.53E-03
65	GO:0006855: drug transmembrane transport	1.16E-02
66	GO:0000165: MAPK cascade	1.19E-02
67	GO:0009738: abscisic acid-activated signaling pathway	1.27E-02
68	GO:0006364: rRNA processing	1.28E-02
69	GO:0009620: response to fungus	1.55E-02
70	GO:0006396: RNA processing	1.68E-02
71	GO:0000398: mRNA splicing, via spliceosome	1.83E-02
72	GO:0016567: protein ubiquitination	2.07E-02
73	GO:0009739: response to gibberellin	2.63E-02
74	GO:0006979: response to oxidative stress	2.68E-02
75	GO:0006470: protein dephosphorylation	2.68E-02
76	GO:0010468: regulation of gene expression	2.76E-02
77	GO:0006355: regulation of transcription, DNA-templated	2.90E-02
78	GO:0009658: chloroplast organization	3.32E-02
79	GO:0009723: response to ethylene	3.68E-02
80	GO:0080167: response to karrikin	3.87E-02
81	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.96E-02
82	GO:0016192: vesicle-mediated transport	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0090440: abscisic acid transporter activity	4.45E-05
4	GO:0004348: glucosylceramidase activity	4.45E-05
5	GO:0042736: NADH kinase activity	4.45E-05
6	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.10E-04
7	GO:0016629: 12-oxophytodienoate reductase activity	1.10E-04
8	GO:0004103: choline kinase activity	1.10E-04
9	GO:0008883: glutamyl-tRNA reductase activity	1.10E-04
10	GO:0001047: core promoter binding	1.10E-04
11	GO:0004674: protein serine/threonine kinase activity	1.33E-04
12	GO:0004383: guanylate cyclase activity	1.89E-04
13	GO:0016165: linoleate 13S-lipoxygenase activity	1.89E-04
14	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.78E-04
15	GO:0001653: peptide receptor activity	2.78E-04
16	GO:0035250: UDP-galactosyltransferase activity	2.78E-04
17	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.55E-04
18	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.75E-04
19	GO:0016301: kinase activity	6.65E-04
20	GO:0005524: ATP binding	6.94E-04
21	GO:0003951: NAD+ kinase activity	1.06E-03
22	GO:0000175: 3'-5'-exoribonuclease activity	1.92E-03
23	GO:0015297: antiporter activity	2.51E-03
24	GO:0004540: ribonuclease activity	2.96E-03
25	GO:0004707: MAP kinase activity	2.96E-03
26	GO:0010181: FMN binding	4.35E-03
27	GO:0044212: transcription regulatory region DNA binding	5.05E-03
28	GO:0004722: protein serine/threonine phosphatase activity	6.56E-03
29	GO:0004004: ATP-dependent RNA helicase activity	6.89E-03
30	GO:0004683: calmodulin-dependent protein kinase activity	6.89E-03
31	GO:0004842: ubiquitin-protein transferase activity	7.62E-03
32	GO:0015238: drug transmembrane transporter activity	7.65E-03
33	GO:0005096: GTPase activator activity	7.65E-03
34	GO:0050661: NADP binding	9.55E-03
35	GO:0046872: metal ion binding	1.18E-02
36	GO:0004386: helicase activity	1.75E-02
37	GO:0030246: carbohydrate binding	1.77E-02
38	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.97E-02
39	GO:0005516: calmodulin binding	1.98E-02
40	GO:0008194: UDP-glycosyltransferase activity	2.63E-02
41	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.73E-02
42	GO:0003676: nucleic acid binding	3.02E-02
43	GO:0003677: DNA binding	3.73E-02
44	GO:0004497: monooxygenase activity	3.87E-02
45	GO:0004672: protein kinase activity	3.90E-02
46	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.40E-02
47	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0000178: exosome (RNase complex)	4.75E-04
2	GO:0030136: clathrin-coated vesicle	3.73E-03
3	GO:0005770: late endosome	4.14E-03
4	GO:0000932: P-body	6.15E-03
5	GO:0005737: cytoplasm	6.79E-03
6	GO:0031902: late endosome membrane	9.83E-03
7	GO:0009706: chloroplast inner membrane	1.65E-02
8	GO:0009536: plastid	3.27E-02
9	GO:0005874: microtubule	3.78E-02
10	GO:0005634: nucleus	4.56E-02