Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G30160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006005: L-fucose biosynthetic process0.00E+00
2GO:0043487: regulation of RNA stability0.00E+00
3GO:0048867: stem cell fate determination0.00E+00
4GO:0043462: regulation of ATPase activity0.00E+00
5GO:0090306: spindle assembly involved in meiosis0.00E+00
6GO:0090352: regulation of nitrate assimilation0.00E+00
7GO:0010247: detection of phosphate ion0.00E+00
8GO:0019481: L-alanine catabolic process, by transamination0.00E+00
9GO:0006457: protein folding7.29E-07
10GO:0009408: response to heat9.86E-07
11GO:0051131: chaperone-mediated protein complex assembly1.83E-06
12GO:0006744: ubiquinone biosynthetic process1.82E-05
13GO:0006413: translational initiation2.82E-05
14GO:0090332: stomatal closure4.74E-05
15GO:0018920: glyphosate metabolic process5.79E-05
16GO:0042350: GDP-L-fucose biosynthetic process5.79E-05
17GO:0080173: male-female gamete recognition during double fertilization5.79E-05
18GO:0010113: negative regulation of systemic acquired resistance5.79E-05
19GO:1902182: shoot apical meristem development5.79E-05
20GO:0071277: cellular response to calcium ion5.79E-05
21GO:0009073: aromatic amino acid family biosynthetic process6.78E-05
22GO:0010155: regulation of proton transport1.41E-04
23GO:0019521: D-gluconate metabolic process1.41E-04
24GO:0010372: positive regulation of gibberellin biosynthetic process1.41E-04
25GO:0010187: negative regulation of seed germination1.52E-04
26GO:0042351: 'de novo' GDP-L-fucose biosynthetic process2.40E-04
27GO:0009845: seed germination3.09E-04
28GO:0007004: telomere maintenance via telomerase3.49E-04
29GO:1902347: response to strigolactone4.66E-04
30GO:0033320: UDP-D-xylose biosynthetic process4.66E-04
31GO:0010483: pollen tube reception4.66E-04
32GO:0045723: positive regulation of fatty acid biosynthetic process4.66E-04
33GO:0010286: heat acclimation4.95E-04
34GO:0009615: response to virus5.54E-04
35GO:0016973: poly(A)+ mRNA export from nucleus5.92E-04
36GO:0030308: negative regulation of cell growth5.92E-04
37GO:0033365: protein localization to organelle7.24E-04
38GO:0010337: regulation of salicylic acid metabolic process7.24E-04
39GO:0016070: RNA metabolic process7.24E-04
40GO:0042732: D-xylose metabolic process7.24E-04
41GO:0009423: chorismate biosynthetic process8.63E-04
42GO:0080167: response to karrikin9.57E-04
43GO:0006402: mRNA catabolic process1.16E-03
44GO:2000070: regulation of response to water deprivation1.16E-03
45GO:0050821: protein stabilization1.16E-03
46GO:0009787: regulation of abscisic acid-activated signaling pathway1.16E-03
47GO:0006875: cellular metal ion homeostasis1.16E-03
48GO:0006997: nucleus organization1.32E-03
49GO:0017004: cytochrome complex assembly1.32E-03
50GO:0009808: lignin metabolic process1.32E-03
51GO:0009699: phenylpropanoid biosynthetic process1.32E-03
52GO:0015996: chlorophyll catabolic process1.32E-03
53GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay1.48E-03
54GO:0048589: developmental growth1.48E-03
55GO:0007338: single fertilization1.48E-03
56GO:0006098: pentose-phosphate shunt1.48E-03
57GO:0010332: response to gamma radiation1.48E-03
58GO:0006417: regulation of translation1.68E-03
59GO:0009870: defense response signaling pathway, resistance gene-dependent1.83E-03
60GO:0019538: protein metabolic process1.83E-03
61GO:0009698: phenylpropanoid metabolic process2.02E-03
62GO:0006913: nucleocytoplasmic transport2.02E-03
63GO:0010152: pollen maturation2.21E-03
64GO:0016925: protein sumoylation2.21E-03
65GO:0000266: mitochondrial fission2.21E-03
66GO:0006396: RNA processing2.21E-03
67GO:0050826: response to freezing2.41E-03
68GO:0006446: regulation of translational initiation2.62E-03
69GO:0034605: cellular response to heat2.62E-03
70GO:0090351: seedling development2.82E-03
71GO:0009225: nucleotide-sugar metabolic process2.82E-03
72GO:0009901: anther dehiscence2.82E-03
73GO:0046686: response to cadmium ion3.01E-03
74GO:0006406: mRNA export from nucleus3.26E-03
75GO:0016036: cellular response to phosphate starvation3.43E-03
76GO:0010073: meristem maintenance3.49E-03
77GO:0006874: cellular calcium ion homeostasis3.49E-03
78GO:0098542: defense response to other organism3.72E-03
79GO:0061077: chaperone-mediated protein folding3.72E-03
80GO:0040007: growth4.20E-03
81GO:0009686: gibberellin biosynthetic process4.20E-03
82GO:0009306: protein secretion4.44E-03
83GO:0010584: pollen exine formation4.44E-03
84GO:0010501: RNA secondary structure unwinding4.95E-03
85GO:0006342: chromatin silencing5.21E-03
86GO:0009741: response to brassinosteroid5.21E-03
87GO:0009791: post-embryonic development5.75E-03
88GO:0010183: pollen tube guidance5.75E-03
89GO:0031047: gene silencing by RNA6.31E-03
90GO:0032502: developmental process6.31E-03
91GO:0048366: leaf development6.66E-03
92GO:0016579: protein deubiquitination7.47E-03
93GO:0001666: response to hypoxia7.78E-03
94GO:0009911: positive regulation of flower development7.78E-03
95GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.08E-03
96GO:0009816: defense response to bacterium, incompatible interaction8.08E-03
97GO:0006974: cellular response to DNA damage stimulus8.40E-03
98GO:0006886: intracellular protein transport8.67E-03
99GO:0048573: photoperiodism, flowering8.71E-03
100GO:0016049: cell growth9.03E-03
101GO:0048481: plant ovule development9.36E-03
102GO:0009651: response to salt stress9.62E-03
103GO:0009910: negative regulation of flower development1.04E-02
104GO:0006397: mRNA processing1.08E-02
105GO:0045087: innate immune response1.11E-02
106GO:0009846: pollen germination1.55E-02
107GO:0006364: rRNA processing1.63E-02
108GO:0010224: response to UV-B1.67E-02
109GO:0009909: regulation of flower development1.75E-02
110GO:0009611: response to wounding1.89E-02
111GO:0051301: cell division2.01E-02
112GO:0009553: embryo sac development2.05E-02
113GO:0009742: brassinosteroid mediated signaling pathway2.19E-02
114GO:0040008: regulation of growth2.99E-02
115GO:0007623: circadian rhythm3.09E-02
116GO:0009617: response to bacterium3.51E-02
117GO:0009414: response to water deprivation3.65E-02
118GO:0042742: defense response to bacterium3.73E-02
119GO:0009723: response to ethylene4.68E-02
RankGO TermAdjusted P value
1GO:0016710: trans-cinnamate 4-monooxygenase activity0.00E+00
2GO:0005524: ATP binding2.79E-07
3GO:0003729: mRNA binding9.88E-07
4GO:0051082: unfolded protein binding1.07E-05
5GO:0003743: translation initiation factor activity4.37E-05
6GO:0017151: DEAD/H-box RNA helicase binding5.79E-05
7GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity5.79E-05
8GO:0050577: GDP-L-fucose synthase activity5.79E-05
9GO:0031072: heat shock protein binding9.21E-05
10GO:0043021: ribonucleoprotein complex binding1.41E-04
11GO:0070034: telomerase RNA binding1.41E-04
12GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity1.41E-04
13GO:0019829: cation-transporting ATPase activity2.40E-04
14GO:0019789: SUMO transferase activity3.49E-04
15GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity3.49E-04
16GO:0002020: protease binding5.92E-04
17GO:0004004: ATP-dependent RNA helicase activity6.49E-04
18GO:0048040: UDP-glucuronate decarboxylase activity7.24E-04
19GO:0031369: translation initiation factor binding7.24E-04
20GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity8.63E-04
21GO:0070403: NAD+ binding8.63E-04
22GO:0004012: phospholipid-translocating ATPase activity8.63E-04
23GO:0005515: protein binding9.40E-04
24GO:0042162: telomeric DNA binding1.01E-03
25GO:0004564: beta-fructofuranosidase activity1.16E-03
26GO:0031490: chromatin DNA binding1.65E-03
27GO:0004575: sucrose alpha-glucosidase activity1.65E-03
28GO:0008026: ATP-dependent helicase activity2.27E-03
29GO:0004386: helicase activity2.34E-03
30GO:0005388: calcium-transporting ATPase activity2.41E-03
31GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.41E-03
32GO:0003723: RNA binding3.14E-03
33GO:0043130: ubiquitin binding3.26E-03
34GO:0036459: thiol-dependent ubiquitinyl hydrolase activity3.72E-03
35GO:0004540: ribonuclease activity3.72E-03
36GO:0003713: transcription coactivator activity5.21E-03
37GO:0030276: clathrin binding5.21E-03
38GO:0001085: RNA polymerase II transcription factor binding5.21E-03
39GO:0050662: coenzyme binding5.48E-03
40GO:0016853: isomerase activity5.48E-03
41GO:0004843: thiol-dependent ubiquitin-specific protease activity6.02E-03
42GO:0004518: nuclease activity6.31E-03
43GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.04E-02
44GO:0042393: histone binding1.21E-02
45GO:0003676: nucleic acid binding1.31E-02
46GO:0016887: ATPase activity1.61E-02
47GO:0016874: ligase activity2.01E-02
48GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.70E-02
49GO:0042802: identical protein binding3.67E-02
50GO:0005215: transporter activity4.12E-02
51GO:0000287: magnesium ion binding4.17E-02
52GO:0003682: chromatin binding4.39E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0043680: filiform apparatus0.00E+00
3GO:0016442: RISC complex5.79E-05
4GO:0030688: preribosome, small subunit precursor5.79E-05
5GO:0009506: plasmodesma5.86E-05
6GO:0005886: plasma membrane6.62E-05
7GO:0005829: cytosol7.90E-05
8GO:0005730: nucleolus1.37E-04
9GO:0005697: telomerase holoenzyme complex1.41E-04
10GO:0030124: AP-4 adaptor complex2.40E-04
11GO:0000932: P-body5.54E-04
12GO:0005746: mitochondrial respiratory chain5.92E-04
13GO:0034399: nuclear periphery1.16E-03
14GO:0010494: cytoplasmic stress granule1.48E-03
15GO:0005635: nuclear envelope1.62E-03
16GO:0005794: Golgi apparatus1.81E-03
17GO:0048471: perinuclear region of cytoplasm2.02E-03
18GO:0005852: eukaryotic translation initiation factor 3 complex2.02E-03
19GO:0005737: cytoplasm2.98E-03
20GO:0005618: cell wall3.26E-03
21GO:0005741: mitochondrial outer membrane3.72E-03
22GO:0005905: clathrin-coated pit3.72E-03
23GO:0005634: nucleus4.09E-03
24GO:0032580: Golgi cisterna membrane6.88E-03
25GO:0005667: transcription factor complex8.40E-03
26GO:0005643: nuclear pore9.36E-03
27GO:0031902: late endosome membrane1.25E-02
28GO:0005789: endoplasmic reticulum membrane1.34E-02
29GO:0016607: nuclear speck1.88E-02
30GO:0005834: heterotrimeric G-protein complex1.92E-02
31GO:0005777: peroxisome2.12E-02
32GO:0016020: membrane2.30E-02
33GO:0005783: endoplasmic reticulum2.88E-02
34GO:0005802: trans-Golgi network2.96E-02
35GO:0005768: endosome3.36E-02
36GO:0005774: vacuolar membrane3.73E-02
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Gene type



Gene DE type