co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G29905

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0033388: putrescine biosynthetic process from arginine	2.64E-05
3	GO:0009446: putrescine biosynthetic process	6.72E-05
4	GO:0009650: UV protection	1.76E-04
5	GO:0051016: barbed-end actin filament capping	1.76E-04
6	GO:0009765: photosynthesis, light harvesting	2.39E-04
7	GO:0000741: karyogamy	3.78E-04
8	GO:0010189: vitamin E biosynthetic process	4.53E-04
9	GO:0071470: cellular response to osmotic stress	4.53E-04
10	GO:0055114: oxidation-reduction process	5.11E-04
11	GO:1900057: positive regulation of leaf senescence	5.30E-04
12	GO:0009645: response to low light intensity stimulus	5.30E-04
13	GO:0009769: photosynthesis, light harvesting in photosystem II	5.30E-04
14	GO:0009585: red, far-red light phototransduction	5.85E-04
15	GO:0030091: protein repair	6.10E-04
16	GO:0009821: alkaloid biosynthetic process	7.80E-04
17	GO:0009638: phototropism	8.68E-04
18	GO:0006949: syncytium formation	9.59E-04
19	GO:0006807: nitrogen compound metabolic process	1.25E-03
20	GO:0006833: water transport	1.56E-03
21	GO:0009768: photosynthesis, light harvesting in photosystem I	1.78E-03
22	GO:0009269: response to desiccation	1.90E-03
23	GO:0009411: response to UV	2.14E-03
24	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.14E-03
25	GO:0009733: response to auxin	2.51E-03
26	GO:0034220: ion transmembrane transport	2.52E-03
27	GO:0010197: polar nucleus fusion	2.65E-03
28	GO:0048868: pollen tube development	2.65E-03
29	GO:0008654: phospholipid biosynthetic process	2.91E-03
30	GO:0009828: plant-type cell wall loosening	3.47E-03
31	GO:0010411: xyloglucan metabolic process	4.37E-03
32	GO:0018298: protein-chromophore linkage	4.69E-03
33	GO:0010218: response to far red light	5.02E-03
34	GO:0006811: ion transport	5.02E-03
35	GO:0009734: auxin-activated signaling pathway	5.35E-03
36	GO:0009637: response to blue light	5.52E-03
37	GO:0034599: cellular response to oxidative stress	5.69E-03
38	GO:0010114: response to red light	6.57E-03
39	GO:0009416: response to light stimulus	6.74E-03
40	GO:0042546: cell wall biogenesis	6.75E-03
41	GO:0009644: response to high light intensity	6.94E-03
42	GO:0009664: plant-type cell wall organization	7.69E-03
43	GO:0009553: embryo sac development	1.01E-02
44	GO:0009742: brassinosteroid mediated signaling pathway	1.08E-02
45	GO:0009058: biosynthetic process	1.26E-02
46	GO:0009790: embryo development	1.35E-02
47	GO:0006979: response to oxidative stress	1.38E-02
48	GO:0040008: regulation of growth	1.47E-02
49	GO:0009451: RNA modification	1.55E-02
50	GO:0007166: cell surface receptor signaling pathway	1.67E-02
51	GO:0009826: unidimensional cell growth	2.02E-02
52	GO:0005975: carbohydrate metabolic process	2.08E-02
53	GO:0048366: leaf development	2.33E-02
54	GO:0044550: secondary metabolite biosynthetic process	2.57E-02
55	GO:0015979: photosynthesis	2.66E-02
56	GO:0009793: embryo development ending in seed dormancy	3.17E-02
57	GO:0006629: lipid metabolic process	3.19E-02
58	GO:0006281: DNA repair	3.19E-02
59	GO:0009555: pollen development	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0010276: phytol kinase activity	0.00E+00
2	GO:0050126: N-carbamoylputrescine amidase activity	0.00E+00
3	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.39E-04
4	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	3.07E-04
5	GO:0004462: lactoylglutathione lyase activity	3.78E-04
6	GO:0004605: phosphatidate cytidylyltransferase activity	3.78E-04
7	GO:0000293: ferric-chelate reductase activity	3.78E-04
8	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.53E-04
9	GO:0016491: oxidoreductase activity	5.02E-04
10	GO:0016844: strictosidine synthase activity	8.68E-04
11	GO:0008081: phosphoric diester hydrolase activity	1.25E-03
12	GO:0004565: beta-galactosidase activity	1.25E-03
13	GO:0031409: pigment binding	1.56E-03
14	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.05E-03
15	GO:0008483: transaminase activity	3.62E-03
16	GO:0015250: water channel activity	3.91E-03
17	GO:0016168: chlorophyll binding	4.06E-03
18	GO:0004519: endonuclease activity	4.15E-03
19	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.37E-03
20	GO:0004364: glutathione transferase activity	6.39E-03
21	GO:0003779: actin binding	1.01E-02
22	GO:0019843: rRNA binding	1.21E-02
23	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.23E-02
24	GO:0016829: lyase activity	1.28E-02
25	GO:0005506: iron ion binding	1.35E-02
26	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.45E-02
27	GO:0042802: identical protein binding	1.80E-02
28	GO:0004497: monooxygenase activity	2.42E-02
29	GO:0046872: metal ion binding	2.55E-02
30	GO:0052689: carboxylic ester hydrolase activity	2.60E-02
31	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.91E-02
32	GO:0009055: electron carrier activity	3.36E-02
33	GO:0000166: nucleotide binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0008290: F-actin capping protein complex	6.72E-05
2	GO:0009517: PSII associated light-harvesting complex II	2.39E-04
3	GO:0008180: COP9 signalosome	7.80E-04
4	GO:0010287: plastoglobule	9.62E-04
5	GO:0030076: light-harvesting complex	1.45E-03
6	GO:0009507: chloroplast	2.28E-03
7	GO:0009522: photosystem I	2.78E-03
8	GO:0009523: photosystem II	2.91E-03
9	GO:0019005: SCF ubiquitin ligase complex	4.69E-03
10	GO:0000502: proteasome complex	8.08E-03
11	GO:0009505: plant-type cell wall	1.72E-02
12	GO:0016020: membrane	1.74E-02
13	GO:0005773: vacuole	1.80E-02
14	GO:0031969: chloroplast membrane	2.42E-02
15	GO:0005886: plasma membrane	3.96E-02
16	GO:0005887: integral component of plasma membrane	3.97E-02
17	GO:0048046: apoplast	4.96E-02