GO Enrichment Analysis of Co-expressed Genes with
AT4G29390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 3 | GO:0007530: sex determination | 0.00E+00 |
| 4 | GO:0006412: translation | 3.61E-151 |
| 5 | GO:0042254: ribosome biogenesis | 2.04E-64 |
| 6 | GO:0000027: ribosomal large subunit assembly | 6.37E-13 |
| 7 | GO:0000028: ribosomal small subunit assembly | 1.88E-07 |
| 8 | GO:1902626: assembly of large subunit precursor of preribosome | 2.27E-05 |
| 9 | GO:0000387: spliceosomal snRNP assembly | 3.74E-05 |
| 10 | GO:0006626: protein targeting to mitochondrion | 9.32E-05 |
| 11 | GO:0000398: mRNA splicing, via spliceosome | 2.44E-04 |
| 12 | GO:0009955: adaxial/abaxial pattern specification | 2.66E-04 |
| 13 | GO:1990258: histone glutamine methylation | 3.81E-04 |
| 14 | GO:0006407: rRNA export from nucleus | 3.81E-04 |
| 15 | GO:0031120: snRNA pseudouridine synthesis | 3.81E-04 |
| 16 | GO:0031118: rRNA pseudouridine synthesis | 3.81E-04 |
| 17 | GO:0015801: aromatic amino acid transport | 3.81E-04 |
| 18 | GO:0030490: maturation of SSU-rRNA | 3.81E-04 |
| 19 | GO:2001006: regulation of cellulose biosynthetic process | 3.81E-04 |
| 20 | GO:0000494: box C/D snoRNA 3'-end processing | 3.81E-04 |
| 21 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.81E-04 |
| 22 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.81E-04 |
| 23 | GO:0080156: mitochondrial mRNA modification | 6.10E-04 |
| 24 | GO:0009245: lipid A biosynthetic process | 6.32E-04 |
| 25 | GO:0071668: plant-type cell wall assembly | 8.27E-04 |
| 26 | GO:0045041: protein import into mitochondrial intermembrane space | 8.27E-04 |
| 27 | GO:0010198: synergid death | 8.27E-04 |
| 28 | GO:0009651: response to salt stress | 1.29E-03 |
| 29 | GO:0002181: cytoplasmic translation | 1.34E-03 |
| 30 | GO:0042256: mature ribosome assembly | 1.34E-03 |
| 31 | GO:0006165: nucleoside diphosphate phosphorylation | 1.93E-03 |
| 32 | GO:0006228: UTP biosynthetic process | 1.93E-03 |
| 33 | GO:0006164: purine nucleotide biosynthetic process | 1.93E-03 |
| 34 | GO:0009558: embryo sac cellularization | 1.93E-03 |
| 35 | GO:0007004: telomere maintenance via telomerase | 1.93E-03 |
| 36 | GO:0070301: cellular response to hydrogen peroxide | 1.93E-03 |
| 37 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.93E-03 |
| 38 | GO:0006241: CTP biosynthetic process | 1.93E-03 |
| 39 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.93E-03 |
| 40 | GO:0009735: response to cytokinin | 2.19E-03 |
| 41 | GO:0042274: ribosomal small subunit biogenesis | 2.60E-03 |
| 42 | GO:0006183: GTP biosynthetic process | 2.60E-03 |
| 43 | GO:0009965: leaf morphogenesis | 2.93E-03 |
| 44 | GO:0031167: rRNA methylation | 3.32E-03 |
| 45 | GO:0010197: polar nucleus fusion | 4.00E-03 |
| 46 | GO:0045040: protein import into mitochondrial outer membrane | 4.11E-03 |
| 47 | GO:0043248: proteasome assembly | 4.11E-03 |
| 48 | GO:0006458: 'de novo' protein folding | 4.95E-03 |
| 49 | GO:0000911: cytokinesis by cell plate formation | 4.95E-03 |
| 50 | GO:0042026: protein refolding | 4.95E-03 |
| 51 | GO:0006414: translational elongation | 5.75E-03 |
| 52 | GO:0015031: protein transport | 5.89E-03 |
| 53 | GO:0001522: pseudouridine synthesis | 6.80E-03 |
| 54 | GO:0009808: lignin metabolic process | 7.80E-03 |
| 55 | GO:0001510: RNA methylation | 7.80E-03 |
| 56 | GO:0006189: 'de novo' IMP biosynthetic process | 8.86E-03 |
| 57 | GO:0048589: developmental growth | 8.86E-03 |
| 58 | GO:0006413: translational initiation | 1.07E-02 |
| 59 | GO:0010015: root morphogenesis | 1.23E-02 |
| 60 | GO:0006913: nucleocytoplasmic transport | 1.23E-02 |
| 61 | GO:0016925: protein sumoylation | 1.36E-02 |
| 62 | GO:0010102: lateral root morphogenesis | 1.48E-02 |
| 63 | GO:0010628: positive regulation of gene expression | 1.48E-02 |
| 64 | GO:0008283: cell proliferation | 1.54E-02 |
| 65 | GO:0006446: regulation of translational initiation | 1.62E-02 |
| 66 | GO:0048467: gynoecium development | 1.62E-02 |
| 67 | GO:0009644: response to high light intensity | 1.66E-02 |
| 68 | GO:0030150: protein import into mitochondrial matrix | 2.04E-02 |
| 69 | GO:0006406: mRNA export from nucleus | 2.04E-02 |
| 70 | GO:0006289: nucleotide-excision repair | 2.04E-02 |
| 71 | GO:0006364: rRNA processing | 2.08E-02 |
| 72 | GO:0009793: embryo development ending in seed dormancy | 2.10E-02 |
| 73 | GO:0003333: amino acid transmembrane transport | 2.34E-02 |
| 74 | GO:0061077: chaperone-mediated protein folding | 2.34E-02 |
| 75 | GO:0007005: mitochondrion organization | 2.50E-02 |
| 76 | GO:0040007: growth | 2.65E-02 |
| 77 | GO:0008033: tRNA processing | 3.15E-02 |
| 78 | GO:0000413: protein peptidyl-prolyl isomerization | 3.15E-02 |
| 79 | GO:0010183: pollen tube guidance | 3.68E-02 |
| 80 | GO:0006635: fatty acid beta-oxidation | 3.86E-02 |
| 81 | GO:0010090: trichome morphogenesis | 4.24E-02 |
| 82 | GO:0010286: heat acclimation | 4.62E-02 |
| 83 | GO:0006633: fatty acid biosynthetic process | 4.63E-02 |
| 84 | GO:0009409: response to cold | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 8.49E-185 |
| 4 | GO:0003729: mRNA binding | 2.98E-36 |
| 5 | GO:0019843: rRNA binding | 3.75E-17 |
| 6 | GO:0008097: 5S rRNA binding | 4.98E-05 |
| 7 | GO:0031177: phosphopantetheine binding | 1.97E-04 |
| 8 | GO:0003723: RNA binding | 2.38E-04 |
| 9 | GO:0000035: acyl binding | 2.66E-04 |
| 10 | GO:0030515: snoRNA binding | 3.44E-04 |
| 11 | GO:1990259: histone-glutamine methyltransferase activity | 3.81E-04 |
| 12 | GO:0035614: snRNA stem-loop binding | 3.81E-04 |
| 13 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 4.31E-04 |
| 14 | GO:0001055: RNA polymerase II activity | 7.45E-04 |
| 15 | GO:0030619: U1 snRNA binding | 8.27E-04 |
| 16 | GO:0015173: aromatic amino acid transmembrane transporter activity | 8.27E-04 |
| 17 | GO:0070034: telomerase RNA binding | 8.27E-04 |
| 18 | GO:0001054: RNA polymerase I activity | 9.99E-04 |
| 19 | GO:0044183: protein binding involved in protein folding | 9.99E-04 |
| 20 | GO:0001056: RNA polymerase III activity | 1.14E-03 |
| 21 | GO:0070181: small ribosomal subunit rRNA binding | 1.34E-03 |
| 22 | GO:0008649: rRNA methyltransferase activity | 1.34E-03 |
| 23 | GO:0070180: large ribosomal subunit rRNA binding | 1.34E-03 |
| 24 | GO:0008430: selenium binding | 1.34E-03 |
| 25 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.35E-03 |
| 26 | GO:0004550: nucleoside diphosphate kinase activity | 1.93E-03 |
| 27 | GO:0005275: amine transmembrane transporter activity | 3.32E-03 |
| 28 | GO:0031386: protein tag | 3.32E-03 |
| 29 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.70E-03 |
| 30 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.11E-03 |
| 31 | GO:0051920: peroxiredoxin activity | 4.95E-03 |
| 32 | GO:0051082: unfolded protein binding | 5.80E-03 |
| 33 | GO:0043022: ribosome binding | 6.80E-03 |
| 34 | GO:0016209: antioxidant activity | 6.80E-03 |
| 35 | GO:0015266: protein channel activity | 1.48E-02 |
| 36 | GO:0031072: heat shock protein binding | 1.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 4 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 5 | GO:0005840: ribosome | 3.28E-133 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 2.15E-108 |
| 7 | GO:0022626: cytosolic ribosome | 9.18E-106 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 1.10E-72 |
| 9 | GO:0005737: cytoplasm | 5.26E-34 |
| 10 | GO:0005829: cytosol | 1.77E-31 |
| 11 | GO:0005730: nucleolus | 5.56E-30 |
| 12 | GO:0009506: plasmodesma | 3.96E-20 |
| 13 | GO:0015934: large ribosomal subunit | 4.35E-16 |
| 14 | GO:0005774: vacuolar membrane | 1.42E-13 |
| 15 | GO:0016020: membrane | 9.04E-12 |
| 16 | GO:0015935: small ribosomal subunit | 1.23E-10 |
| 17 | GO:0005618: cell wall | 3.17E-07 |
| 18 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.10E-06 |
| 19 | GO:0015030: Cajal body | 3.74E-05 |
| 20 | GO:0005773: vacuole | 3.80E-05 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 7.62E-05 |
| 22 | GO:0019013: viral nucleocapsid | 9.32E-05 |
| 23 | GO:0000419: DNA-directed RNA polymerase V complex | 1.56E-04 |
| 24 | GO:0030686: 90S preribosome | 3.81E-04 |
| 25 | GO:0005742: mitochondrial outer membrane translocase complex | 5.27E-04 |
| 26 | GO:0005736: DNA-directed RNA polymerase I complex | 6.32E-04 |
| 27 | GO:0005685: U1 snRNP | 6.32E-04 |
| 28 | GO:0005666: DNA-directed RNA polymerase III complex | 7.45E-04 |
| 29 | GO:0071011: precatalytic spliceosome | 7.45E-04 |
| 30 | GO:0005681: spliceosomal complex | 8.23E-04 |
| 31 | GO:0035145: exon-exon junction complex | 8.27E-04 |
| 32 | GO:0000418: DNA-directed RNA polymerase IV complex | 8.68E-04 |
| 33 | GO:0071013: catalytic step 2 spliceosome | 9.99E-04 |
| 34 | GO:0034719: SMN-Sm protein complex | 1.34E-03 |
| 35 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.34E-03 |
| 36 | GO:0000439: core TFIIH complex | 1.34E-03 |
| 37 | GO:1990726: Lsm1-7-Pat1 complex | 1.93E-03 |
| 38 | GO:0031429: box H/ACA snoRNP complex | 1.93E-03 |
| 39 | GO:0005758: mitochondrial intermembrane space | 2.02E-03 |
| 40 | GO:0005886: plasma membrane | 2.17E-03 |
| 41 | GO:0009507: chloroplast | 2.21E-03 |
| 42 | GO:0070469: respiratory chain | 2.22E-03 |
| 43 | GO:0005682: U5 snRNP | 2.60E-03 |
| 44 | GO:0005687: U4 snRNP | 3.32E-03 |
| 45 | GO:0097526: spliceosomal tri-snRNP complex | 3.32E-03 |
| 46 | GO:0031428: box C/D snoRNP complex | 4.11E-03 |
| 47 | GO:0005762: mitochondrial large ribosomal subunit | 4.95E-03 |
| 48 | GO:0005689: U12-type spliceosomal complex | 4.95E-03 |
| 49 | GO:0016272: prefoldin complex | 4.95E-03 |
| 50 | GO:0071004: U2-type prespliceosome | 6.80E-03 |
| 51 | GO:0005688: U6 snRNP | 6.80E-03 |
| 52 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 7.80E-03 |
| 53 | GO:0005686: U2 snRNP | 1.11E-02 |
| 54 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.23E-02 |
| 55 | GO:0048471: perinuclear region of cytoplasm | 1.23E-02 |
| 56 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.23E-02 |
| 57 | GO:0031307: integral component of mitochondrial outer membrane | 1.36E-02 |
| 58 | GO:0032040: small-subunit processome | 1.36E-02 |
| 59 | GO:0000502: proteasome complex | 2.08E-02 |
| 60 | GO:0005654: nucleoplasm | 3.60E-02 |