co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G29120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0036172: thiamine salvage	0.00E+00
3	GO:0046085: adenosine metabolic process	0.00E+00
4	GO:0006044: N-acetylglucosamine metabolic process	0.00E+00
5	GO:0048870: cell motility	0.00E+00
6	GO:0009240: isopentenyl diphosphate biosynthetic process	5.48E-05
7	GO:0000066: mitochondrial ornithine transport	5.48E-05
8	GO:0007051: spindle organization	1.34E-04
9	GO:0007163: establishment or maintenance of cell polarity	1.34E-04
10	GO:0006432: phenylalanyl-tRNA aminoacylation	1.34E-04
11	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.34E-04
12	GO:0050992: dimethylallyl diphosphate biosynthetic process	1.34E-04
13	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	2.28E-04
14	GO:0071492: cellular response to UV-A	2.28E-04
15	GO:0010476: gibberellin mediated signaling pathway	2.28E-04
16	GO:0010325: raffinose family oligosaccharide biosynthetic process	2.28E-04
17	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.28E-04
18	GO:0010090: trichome morphogenesis	4.10E-04
19	GO:0009765: photosynthesis, light harvesting	4.45E-04
20	GO:0007219: Notch signaling pathway	4.45E-04
21	GO:0006749: glutathione metabolic process	4.45E-04
22	GO:0071486: cellular response to high light intensity	4.45E-04
23	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	4.45E-04
24	GO:0006405: RNA export from nucleus	5.66E-04
25	GO:0030041: actin filament polymerization	5.66E-04
26	GO:0009229: thiamine diphosphate biosynthetic process	5.66E-04
27	GO:0031053: primary miRNA processing	6.92E-04
28	GO:0009228: thiamine biosynthetic process	6.92E-04
29	GO:0000060: protein import into nucleus, translocation	6.92E-04
30	GO:0009117: nucleotide metabolic process	6.92E-04
31	GO:0016070: RNA metabolic process	6.92E-04
32	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	8.25E-04
33	GO:0048444: floral organ morphogenesis	8.25E-04
34	GO:0009853: photorespiration	8.40E-04
35	GO:0000082: G1/S transition of mitotic cell cycle	9.62E-04
36	GO:0045454: cell redox homeostasis	1.09E-03
37	GO:0045292: mRNA cis splicing, via spliceosome	1.11E-03
38	GO:0045010: actin nucleation	1.11E-03
39	GO:0010100: negative regulation of photomorphogenesis	1.26E-03
40	GO:0009245: lipid A biosynthetic process	1.41E-03
41	GO:0009056: catabolic process	1.41E-03
42	GO:0000902: cell morphogenesis	1.41E-03
43	GO:0098656: anion transmembrane transport	1.41E-03
44	GO:0016569: covalent chromatin modification	1.89E-03
45	GO:0072593: reactive oxygen species metabolic process	1.93E-03
46	GO:0016485: protein processing	1.93E-03
47	GO:0034976: response to endoplasmic reticulum stress	2.90E-03
48	GO:0008299: isoprenoid biosynthetic process	3.32E-03
49	GO:0016226: iron-sulfur cluster assembly	3.77E-03
50	GO:0006012: galactose metabolic process	4.00E-03
51	GO:0051028: mRNA transport	4.47E-03
52	GO:0006662: glycerol ether metabolic process	4.96E-03
53	GO:0016126: sterol biosynthetic process	7.40E-03
54	GO:0006974: cellular response to DNA damage stimulus	7.99E-03
55	GO:0015995: chlorophyll biosynthetic process	8.29E-03
56	GO:0032259: methylation	9.24E-03
57	GO:0009407: toxin catabolic process	9.54E-03
58	GO:0006281: DNA repair	9.65E-03
59	GO:0034599: cellular response to oxidative stress	1.09E-02
60	GO:0006839: mitochondrial transport	1.15E-02
61	GO:0009926: auxin polar transport	1.26E-02
62	GO:0000154: rRNA modification	1.37E-02
63	GO:0009636: response to toxic substance	1.37E-02
64	GO:0009965: leaf morphogenesis	1.37E-02
65	GO:0009585: red, far-red light phototransduction	1.55E-02
66	GO:0010224: response to UV-B	1.59E-02
67	GO:0009737: response to abscisic acid	1.86E-02
68	GO:0051726: regulation of cell cycle	2.08E-02
69	GO:0000398: mRNA splicing, via spliceosome	2.21E-02
70	GO:0006633: fatty acid biosynthetic process	2.75E-02
71	GO:0010228: vegetative to reproductive phase transition of meristem	3.04E-02
72	GO:0009739: response to gibberellin	3.19E-02
73	GO:0009826: unidimensional cell growth	3.91E-02
74	GO:0080167: response to karrikin	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity	0.00E+00
2	GO:0004417: hydroxyethylthiazole kinase activity	0.00E+00
3	GO:0004452: isopentenyl-diphosphate delta-isomerase activity	5.48E-05
4	GO:0000064: L-ornithine transmembrane transporter activity	1.34E-04
5	GO:0004826: phenylalanine-tRNA ligase activity	1.34E-04
6	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.34E-04
7	GO:0010331: gibberellin binding	1.34E-04
8	GO:0032403: protein complex binding	2.28E-04
9	GO:0008649: rRNA methyltransferase activity	2.28E-04
10	GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity	2.28E-04
11	GO:0008080: N-acetyltransferase activity	2.91E-04
12	GO:0000254: C-4 methylsterol oxidase activity	3.33E-04
13	GO:0035529: NADH pyrophosphatase activity	3.33E-04
14	GO:0000339: RNA cap binding	3.33E-04
15	GO:0031177: phosphopantetheine binding	6.92E-04
16	GO:0000035: acyl binding	8.25E-04
17	GO:0008143: poly(A) binding	9.62E-04
18	GO:0016787: hydrolase activity	9.80E-04
19	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.11E-03
20	GO:0004034: aldose 1-epimerase activity	1.11E-03
21	GO:0035064: methylated histone binding	1.11E-03
22	GO:0047617: acyl-CoA hydrolase activity	1.58E-03
23	GO:0003824: catalytic activity	1.58E-03
24	GO:0008047: enzyme activator activity	1.75E-03
25	GO:0015035: protein disulfide oxidoreductase activity	2.06E-03
26	GO:0000049: tRNA binding	2.11E-03
27	GO:0005315: inorganic phosphate transmembrane transporter activity	2.30E-03
28	GO:0004089: carbonate dehydratase activity	2.30E-03
29	GO:0004175: endopeptidase activity	2.49E-03
30	GO:0004190: aspartic-type endopeptidase activity	2.70E-03
31	GO:0003756: protein disulfide isomerase activity	4.23E-03
32	GO:0008514: organic anion transmembrane transporter activity	4.23E-03
33	GO:0047134: protein-disulfide reductase activity	4.47E-03
34	GO:0008536: Ran GTPase binding	4.96E-03
35	GO:0008168: methyltransferase activity	5.08E-03
36	GO:0004791: thioredoxin-disulfide reductase activity	5.22E-03
37	GO:0016853: isomerase activity	5.22E-03
38	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.27E-03
39	GO:0016168: chlorophyll binding	7.69E-03
40	GO:0008375: acetylglucosaminyltransferase activity	7.99E-03
41	GO:0004806: triglyceride lipase activity	8.29E-03
42	GO:0005096: GTPase activator activity	9.22E-03
43	GO:0004364: glutathione transferase activity	1.22E-02
44	GO:0051537: 2 iron, 2 sulfur cluster binding	1.33E-02
45	GO:0015144: carbohydrate transmembrane transporter activity	2.66E-02
46	GO:0005351: sugar:proton symporter activity	2.89E-02
47	GO:0003723: RNA binding	3.05E-02
48	GO:0042802: identical protein binding	3.49E-02
49	GO:0016788: hydrolase activity, acting on ester bonds	4.07E-02

Rank	GO Term	Adjusted P value
1	GO:0005845: mRNA cap binding complex	5.48E-05
2	GO:0005846: nuclear cap binding complex	1.34E-04
3	GO:0045271: respiratory chain complex I	1.57E-04
4	GO:0031209: SCAR complex	6.92E-04
5	GO:0005798: Golgi-associated vesicle	6.92E-04
6	GO:0031966: mitochondrial membrane	1.32E-03
7	GO:0005747: mitochondrial respiratory chain complex I	1.72E-03
8	GO:0070469: respiratory chain	3.32E-03
9	GO:0015935: small ribosomal subunit	3.54E-03
10	GO:0009523: photosystem II	5.48E-03
11	GO:0071944: cell periphery	6.27E-03
12	GO:0005643: nuclear pore	8.91E-03
13	GO:0009536: plastid	9.23E-03
14	GO:0005789: endoplasmic reticulum membrane	1.22E-02
15	GO:0005856: cytoskeleton	1.37E-02
16	GO:0005739: mitochondrion	1.55E-02
17	GO:0005759: mitochondrial matrix	2.75E-02
18	GO:0009507: chloroplast	3.01E-02
19	GO:0005615: extracellular space	3.19E-02
20	GO:0005737: cytoplasm	3.60E-02
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.29E-02
22	GO:0031969: chloroplast membrane	4.68E-02