Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G28600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032499: detection of peptidoglycan0.00E+00
2GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
3GO:0090306: spindle assembly involved in meiosis0.00E+00
4GO:0019481: L-alanine catabolic process, by transamination0.00E+00
5GO:0043487: regulation of RNA stability0.00E+00
6GO:0010372: positive regulation of gibberellin biosynthetic process7.67E-08
7GO:0051131: chaperone-mediated protein complex assembly7.25E-07
8GO:0006402: mRNA catabolic process1.02E-05
9GO:0006680: glucosylceramide catabolic process3.37E-05
10GO:0099636: cytoplasmic streaming3.37E-05
11GO:0032491: detection of molecule of fungal origin3.37E-05
12GO:0015853: adenine transport3.37E-05
13GO:0015854: guanine transport3.37E-05
14GO:0051014: actin filament severing3.37E-05
15GO:0071277: cellular response to calcium ion3.37E-05
16GO:0006409: tRNA export from nucleus3.37E-05
17GO:0034605: cellular response to heat4.82E-05
18GO:0010155: regulation of proton transport8.48E-05
19GO:0009306: protein secretion1.18E-04
20GO:0010447: response to acidic pH1.47E-04
21GO:0031047: gene silencing by RNA2.05E-04
22GO:0071323: cellular response to chitin2.18E-04
23GO:0007004: telomere maintenance via telomerase2.18E-04
24GO:1902347: response to strigolactone2.95E-04
25GO:0015743: malate transport2.95E-04
26GO:0051764: actin crosslink formation2.95E-04
27GO:0071219: cellular response to molecule of bacterial origin2.95E-04
28GO:0043484: regulation of RNA splicing3.77E-04
29GO:0030041: actin filament polymerization3.77E-04
30GO:0033365: protein localization to organelle4.63E-04
31GO:0048317: seed morphogenesis4.63E-04
32GO:0045087: innate immune response4.63E-04
33GO:0010044: response to aluminum ion6.47E-04
34GO:0006744: ubiquinone biosynthetic process6.47E-04
35GO:0051693: actin filament capping6.47E-04
36GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway6.47E-04
37GO:0009408: response to heat6.55E-04
38GO:0019375: galactolipid biosynthetic process7.44E-04
39GO:0050821: protein stabilization7.44E-04
40GO:0045010: actin nucleation7.44E-04
41GO:0017004: cytochrome complex assembly8.45E-04
42GO:0015996: chlorophyll catabolic process8.45E-04
43GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay9.49E-04
44GO:0046686: response to cadmium ion1.04E-03
45GO:0008202: steroid metabolic process1.06E-03
46GO:0090332: stomatal closure1.06E-03
47GO:0030042: actin filament depolymerization1.06E-03
48GO:0019538: protein metabolic process1.17E-03
49GO:0000266: mitochondrial fission1.40E-03
50GO:0009845: seed germination1.47E-03
51GO:0007015: actin filament organization1.65E-03
52GO:0006446: regulation of translational initiation1.65E-03
53GO:0006413: translational initiation1.74E-03
54GO:0090351: seedling development1.78E-03
55GO:0046854: phosphatidylinositol phosphorylation1.78E-03
56GO:0006457: protein folding1.83E-03
57GO:0006863: purine nucleobase transport1.91E-03
58GO:0051017: actin filament bundle assembly2.05E-03
59GO:0006406: mRNA export from nucleus2.05E-03
60GO:0007010: cytoskeleton organization2.05E-03
61GO:0010187: negative regulation of seed germination2.05E-03
62GO:0061077: chaperone-mediated protein folding2.33E-03
63GO:0009686: gibberellin biosynthetic process2.63E-03
64GO:0006606: protein import into nucleus3.09E-03
65GO:0009960: endosperm development3.25E-03
66GO:0009651: response to salt stress3.30E-03
67GO:0048366: leaf development3.35E-03
68GO:0080167: response to karrikin3.53E-03
69GO:0008654: phospholipid biosynthetic process3.59E-03
70GO:0046777: protein autophosphorylation3.77E-03
71GO:0010286: heat acclimation4.46E-03
72GO:0009615: response to virus4.83E-03
73GO:0001666: response to hypoxia4.83E-03
74GO:0009816: defense response to bacterium, incompatible interaction5.02E-03
75GO:0006397: mRNA processing5.41E-03
76GO:0009817: defense response to fungus, incompatible interaction5.79E-03
77GO:0048767: root hair elongation5.99E-03
78GO:0035556: intracellular signal transduction9.70E-03
79GO:0016310: phosphorylation1.00E-02
80GO:0010224: response to UV-B1.03E-02
81GO:0006417: regulation of translation1.08E-02
82GO:0006396: RNA processing1.31E-02
83GO:0016036: cellular response to phosphate starvation1.80E-02
84GO:0042742: defense response to bacterium1.87E-02
85GO:0010200: response to chitin3.08E-02
86GO:0006886: intracellular protein transport3.50E-02
87GO:0006869: lipid transport3.66E-02
88GO:0009737: response to abscisic acid3.97E-02
89GO:0006629: lipid metabolic process3.97E-02
90GO:0048364: root development4.10E-02
RankGO TermAdjusted P value
1GO:2001080: chitosan binding0.00E+00
2GO:0003729: mRNA binding5.88E-08
3GO:0005524: ATP binding9.80E-06
4GO:0004348: glucosylceramidase activity3.37E-05
5GO:0043021: ribonucleoprotein complex binding8.48E-05
6GO:0070034: telomerase RNA binding8.48E-05
7GO:0004518: nuclease activity2.05E-04
8GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.18E-04
9GO:0005253: anion channel activity2.95E-04
10GO:0019199: transmembrane receptor protein kinase activity2.95E-04
11GO:0002020: protease binding3.77E-04
12GO:0008195: phosphatidate phosphatase activity5.53E-04
13GO:0004012: phospholipid-translocating ATPase activity5.53E-04
14GO:0004143: diacylglycerol kinase activity6.47E-04
15GO:0042162: telomeric DNA binding6.47E-04
16GO:0015140: malate transmembrane transporter activity6.47E-04
17GO:0003951: NAD+ kinase activity8.45E-04
18GO:0008135: translation factor activity, RNA binding8.45E-04
19GO:0008142: oxysterol binding8.45E-04
20GO:0004430: 1-phosphatidylinositol 4-kinase activity8.45E-04
21GO:0003779: actin binding1.07E-03
22GO:0051082: unfolded protein binding1.10E-03
23GO:0000049: tRNA binding1.40E-03
24GO:0008139: nuclear localization sequence binding1.52E-03
25GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.52E-03
26GO:0008061: chitin binding1.78E-03
27GO:0003743: translation initiation factor activity2.17E-03
28GO:0005345: purine nucleobase transmembrane transporter activity2.19E-03
29GO:0004540: ribonuclease activity2.33E-03
30GO:0003723: RNA binding3.07E-03
31GO:0008536: Ran GTPase binding3.25E-03
32GO:0051015: actin filament binding4.10E-03
33GO:0003676: nucleic acid binding4.51E-03
34GO:0035091: phosphatidylinositol binding8.60E-03
35GO:0005515: protein binding9.54E-03
36GO:0016301: kinase activity1.17E-02
37GO:0022857: transmembrane transporter activity1.23E-02
38GO:0008026: ATP-dependent helicase activity1.34E-02
39GO:0008565: protein transporter activity1.71E-02
40GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.80E-02
41GO:0005215: transporter activity2.07E-02
42GO:0004674: protein serine/threonine kinase activity2.42E-02
43GO:0000287: magnesium ion binding2.55E-02
44GO:0004672: protein kinase activity2.75E-02
45GO:0042803: protein homodimerization activity3.54E-02
46GO:0016787: hydrolase activity4.00E-02
RankGO TermAdjusted P value
1GO:0016442: RISC complex0.00E+00
2GO:0000932: P-body7.84E-06
3GO:0010494: cytoplasmic stress granule1.67E-05
4GO:0048471: perinuclear region of cytoplasm3.02E-05
5GO:0005697: telomerase holoenzyme complex8.48E-05
6GO:0005746: mitochondrial respiratory chain3.77E-04
7GO:0016363: nuclear matrix5.53E-04
8GO:0005829: cytosol6.30E-04
9GO:0005635: nuclear envelope8.40E-04
10GO:0005884: actin filament1.28E-03
11GO:0005623: cell1.40E-03
12GO:0005741: mitochondrial outer membrane2.33E-03
13GO:0031965: nuclear membrane3.59E-03
14GO:0005737: cytoplasm3.80E-03
15GO:0005618: cell wall4.26E-03
16GO:0005789: endoplasmic reticulum membrane5.50E-03
17GO:0005643: nuclear pore5.79E-03
18GO:0031902: late endosome membrane7.69E-03
19GO:0009506: plasmodesma7.71E-03
20GO:0005886: plasma membrane8.76E-03
21GO:0005856: cytoskeleton8.82E-03
22GO:0005794: Golgi apparatus1.31E-02
23GO:0009524: phragmoplast1.56E-02
24GO:0005622: intracellular1.64E-02
25GO:0009705: plant-type vacuole membrane1.89E-02
26GO:0005730: nucleolus3.16E-02
27GO:0005783: endoplasmic reticulum3.74E-02
28GO:0005743: mitochondrial inner membrane3.77E-02
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Gene type



Gene DE type