co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G28140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019593: mannitol biosynthetic process	0.00E+00
2	GO:0071289: cellular response to nickel ion	0.00E+00
3	GO:0042353: fucose biosynthetic process	0.00E+00
4	GO:0007141: male meiosis I	0.00E+00
5	GO:1904526: regulation of microtubule binding	0.00E+00
6	GO:0009667: plastid inner membrane organization	0.00E+00
7	GO:0010046: response to mycotoxin	0.00E+00
8	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
9	GO:1905499: trichome papilla formation	0.00E+00
10	GO:0035264: multicellular organism growth	0.00E+00
11	GO:0010200: response to chitin	8.11E-11
12	GO:0009737: response to abscisic acid	1.85E-09
13	GO:0009611: response to wounding	2.65E-08
14	GO:0009414: response to water deprivation	1.61E-07
15	GO:0006970: response to osmotic stress	1.05E-06
16	GO:0009409: response to cold	1.11E-06
17	GO:0042335: cuticle development	1.93E-06
18	GO:0006633: fatty acid biosynthetic process	1.26E-05
19	GO:0009695: jasmonic acid biosynthetic process	1.51E-05
20	GO:0009873: ethylene-activated signaling pathway	2.34E-05
21	GO:2000280: regulation of root development	4.94E-05
22	GO:0010286: heat acclimation	1.23E-04
23	GO:0007623: circadian rhythm	1.32E-04
24	GO:0006665: sphingolipid metabolic process	1.66E-04
25	GO:0010025: wax biosynthetic process	2.00E-04
26	GO:0035435: phosphate ion transmembrane transport	2.37E-04
27	GO:0009269: response to desiccation	3.04E-04
28	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.10E-04
29	GO:0034472: snRNA 3'-end processing	4.29E-04
30	GO:0051180: vitamin transport	4.29E-04
31	GO:0009609: response to symbiotic bacterium	4.29E-04
32	GO:0006562: proline catabolic process	4.29E-04
33	GO:0030974: thiamine pyrophosphate transport	4.29E-04
34	GO:0048700: acquisition of desiccation tolerance in seed	4.29E-04
35	GO:0050691: regulation of defense response to virus by host	4.29E-04
36	GO:0006680: glucosylceramide catabolic process	4.29E-04
37	GO:1902039: negative regulation of seed dormancy process	4.29E-04
38	GO:0080051: cutin transport	4.29E-04
39	GO:0033481: galacturonate biosynthetic process	4.29E-04
40	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	4.29E-04
41	GO:0006631: fatty acid metabolic process	4.65E-04
42	GO:0009415: response to water	5.13E-04
43	GO:2000070: regulation of response to water deprivation	5.13E-04
44	GO:0050832: defense response to fungus	6.02E-04
45	GO:0098656: anion transmembrane transport	7.50E-04
46	GO:0009651: response to salt stress	8.84E-04
47	GO:0071422: succinate transmembrane transport	9.27E-04
48	GO:0010133: proline catabolic process to glutamate	9.27E-04
49	GO:0031407: oxylipin metabolic process	9.27E-04
50	GO:0042754: negative regulation of circadian rhythm	9.27E-04
51	GO:0010289: homogalacturonan biosynthetic process	9.27E-04
52	GO:0006741: NADP biosynthetic process	9.27E-04
53	GO:2000030: regulation of response to red or far red light	9.27E-04
54	GO:0015908: fatty acid transport	9.27E-04
55	GO:1901679: nucleotide transmembrane transport	9.27E-04
56	GO:0015893: drug transport	9.27E-04
57	GO:0048838: release of seed from dormancy	9.27E-04
58	GO:0015709: thiosulfate transport	9.27E-04
59	GO:0009751: response to salicylic acid	1.16E-03
60	GO:0010015: root morphogenesis	1.18E-03
61	GO:0000038: very long-chain fatty acid metabolic process	1.18E-03
62	GO:0010029: regulation of seed germination	1.30E-03
63	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.35E-03
64	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.51E-03
65	GO:0019674: NAD metabolic process	1.51E-03
66	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.51E-03
67	GO:0080168: abscisic acid transport	1.51E-03
68	GO:0046168: glycerol-3-phosphate catabolic process	1.51E-03
69	GO:0080121: AMP transport	1.51E-03
70	GO:0010288: response to lead ion	1.51E-03
71	GO:0051176: positive regulation of sulfur metabolic process	1.51E-03
72	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.51E-03
73	GO:0006081: cellular aldehyde metabolic process	1.51E-03
74	GO:0010143: cutin biosynthetic process	1.73E-03
75	GO:0009631: cold acclimation	2.04E-03
76	GO:0019363: pyridine nucleotide biosynthetic process	2.18E-03
77	GO:0015729: oxaloacetate transport	2.18E-03
78	GO:0006537: glutamate biosynthetic process	2.18E-03
79	GO:0033014: tetrapyrrole biosynthetic process	2.18E-03
80	GO:0006072: glycerol-3-phosphate metabolic process	2.18E-03
81	GO:0030100: regulation of endocytosis	2.18E-03
82	GO:0010031: circumnutation	2.18E-03
83	GO:0009413: response to flooding	2.18E-03
84	GO:0051259: protein oligomerization	2.18E-03
85	GO:0009863: salicylic acid mediated signaling pathway	2.40E-03
86	GO:0006839: mitochondrial transport	2.71E-03
87	GO:0031408: oxylipin biosynthetic process	2.91E-03
88	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	2.93E-03
89	GO:0071585: detoxification of cadmium ion	2.93E-03
90	GO:0006536: glutamate metabolic process	2.93E-03
91	GO:0006552: leucine catabolic process	2.93E-03
92	GO:0042991: transcription factor import into nucleus	2.93E-03
93	GO:0015867: ATP transport	2.93E-03
94	GO:1902347: response to strigolactone	2.93E-03
95	GO:0009694: jasmonic acid metabolic process	2.93E-03
96	GO:0010222: stem vascular tissue pattern formation	2.93E-03
97	GO:0051707: response to other organism	3.17E-03
98	GO:0009644: response to high light intensity	3.51E-03
99	GO:0009435: NAD biosynthetic process	3.76E-03
100	GO:0009247: glycolipid biosynthetic process	3.76E-03
101	GO:0071423: malate transmembrane transport	3.76E-03
102	GO:0010117: photoprotection	3.76E-03
103	GO:0045487: gibberellin catabolic process	3.76E-03
104	GO:0042538: hyperosmotic salinity response	4.24E-03
105	GO:0000271: polysaccharide biosynthetic process	4.44E-03
106	GO:0006751: glutathione catabolic process	4.65E-03
107	GO:0015866: ADP transport	4.65E-03
108	GO:0010256: endomembrane system organization	4.65E-03
109	GO:0048232: male gamete generation	4.65E-03
110	GO:0006796: phosphate-containing compound metabolic process	4.65E-03
111	GO:0047484: regulation of response to osmotic stress	4.65E-03
112	GO:1900425: negative regulation of defense response to bacterium	4.65E-03
113	GO:0006574: valine catabolic process	4.65E-03
114	GO:0010224: response to UV-B	4.85E-03
115	GO:1901001: negative regulation of response to salt stress	5.60E-03
116	GO:0045926: negative regulation of growth	5.60E-03
117	GO:0009082: branched-chain amino acid biosynthetic process	5.60E-03
118	GO:0098655: cation transmembrane transport	5.60E-03
119	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	5.60E-03
120	GO:0010555: response to mannitol	5.60E-03
121	GO:0010193: response to ozone	5.91E-03
122	GO:0009620: response to fungus	6.49E-03
123	GO:0006401: RNA catabolic process	6.62E-03
124	GO:0006955: immune response	6.62E-03
125	GO:0030497: fatty acid elongation	6.62E-03
126	GO:0071669: plant-type cell wall organization or biogenesis	6.62E-03
127	GO:0008272: sulfate transport	6.62E-03
128	GO:0050829: defense response to Gram-negative bacterium	6.62E-03
129	GO:1902074: response to salt	6.62E-03
130	GO:0042545: cell wall modification	7.02E-03
131	GO:0007155: cell adhesion	7.71E-03
132	GO:0009819: drought recovery	7.71E-03
133	GO:0019375: galactolipid biosynthetic process	7.71E-03
134	GO:1900150: regulation of defense response to fungus	7.71E-03
135	GO:0050821: protein stabilization	7.71E-03
136	GO:0010208: pollen wall assembly	8.84E-03
137	GO:0009699: phenylpropanoid biosynthetic process	8.84E-03
138	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.07E-03
139	GO:0010345: suberin biosynthetic process	1.00E-02
140	GO:0051865: protein autoubiquitination	1.00E-02
141	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.00E-02
142	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.00E-02
143	GO:0006783: heme biosynthetic process	1.00E-02
144	GO:0009060: aerobic respiration	1.00E-02
145	GO:0006779: porphyrin-containing compound biosynthetic process	1.13E-02
146	GO:0042761: very long-chain fatty acid biosynthetic process	1.13E-02
147	GO:0009790: embryo development	1.18E-02
148	GO:0045892: negative regulation of transcription, DNA-templated	1.19E-02
149	GO:0009416: response to light stimulus	1.21E-02
150	GO:0006811: ion transport	1.24E-02
151	GO:0055062: phosphate ion homeostasis	1.26E-02
152	GO:0006782: protoporphyrinogen IX biosynthetic process	1.26E-02
153	GO:0051026: chiasma assembly	1.26E-02
154	GO:0019538: protein metabolic process	1.26E-02
155	GO:0008285: negative regulation of cell proliferation	1.40E-02
156	GO:0018119: peptidyl-cysteine S-nitrosylation	1.40E-02
157	GO:0030148: sphingolipid biosynthetic process	1.40E-02
158	GO:0010150: leaf senescence	1.47E-02
159	GO:0045490: pectin catabolic process	1.47E-02
160	GO:0006820: anion transport	1.54E-02
161	GO:0071365: cellular response to auxin stimulus	1.54E-02
162	GO:0005986: sucrose biosynthetic process	1.69E-02
163	GO:0010588: cotyledon vascular tissue pattern formation	1.69E-02
164	GO:0050826: response to freezing	1.69E-02
165	GO:0006470: protein dephosphorylation	1.74E-02
166	GO:0009753: response to jasmonic acid	1.78E-02
167	GO:0010468: regulation of gene expression	1.83E-02
168	GO:0048467: gynoecium development	1.84E-02
169	GO:0002237: response to molecule of bacterial origin	1.84E-02
170	GO:0009969: xyloglucan biosynthetic process	1.99E-02
171	GO:0009225: nucleotide-sugar metabolic process	1.99E-02
172	GO:0010167: response to nitrate	1.99E-02
173	GO:0071732: cellular response to nitric oxide	1.99E-02
174	GO:0010030: positive regulation of seed germination	1.99E-02
175	GO:0070588: calcium ion transmembrane transport	1.99E-02
176	GO:0006952: defense response	2.02E-02
177	GO:0042753: positive regulation of circadian rhythm	2.15E-02
178	GO:0006636: unsaturated fatty acid biosynthetic process	2.15E-02
179	GO:2000377: regulation of reactive oxygen species metabolic process	2.32E-02
180	GO:0009809: lignin biosynthetic process	2.49E-02
181	GO:0006364: rRNA processing	2.49E-02
182	GO:0051260: protein homooligomerization	2.66E-02
183	GO:0030245: cellulose catabolic process	2.84E-02
184	GO:0010017: red or far-red light signaling pathway	2.84E-02
185	GO:0016226: iron-sulfur cluster assembly	2.84E-02
186	GO:0007131: reciprocal meiotic recombination	2.84E-02
187	GO:0030433: ubiquitin-dependent ERAD pathway	2.84E-02
188	GO:0031348: negative regulation of defense response	2.84E-02
189	GO:0009686: gibberellin biosynthetic process	3.02E-02
190	GO:0071369: cellular response to ethylene stimulus	3.02E-02
191	GO:0001944: vasculature development	3.02E-02
192	GO:0009723: response to ethylene	3.05E-02
193	GO:0048443: stamen development	3.20E-02
194	GO:0010091: trichome branching	3.20E-02
195	GO:0070417: cellular response to cold	3.39E-02
196	GO:0009624: response to nematode	3.54E-02
197	GO:0009738: abscisic acid-activated signaling pathway	3.56E-02
198	GO:0010501: RNA secondary structure unwinding	3.58E-02
199	GO:0055114: oxidation-reduction process	3.71E-02
200	GO:0009742: brassinosteroid mediated signaling pathway	3.75E-02
201	GO:0045489: pectin biosynthetic process	3.78E-02
202	GO:0048868: pollen tube development	3.78E-02
203	GO:0048544: recognition of pollen	3.98E-02
204	GO:0006814: sodium ion transport	3.98E-02
205	GO:0006979: response to oxidative stress	4.04E-02
206	GO:0009749: response to glucose	4.18E-02
207	GO:0008654: phospholipid biosynthetic process	4.18E-02
208	GO:0006351: transcription, DNA-templated	4.19E-02
209	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.39E-02
210	GO:0000302: response to reactive oxygen species	4.39E-02
211	GO:1901657: glycosyl compound metabolic process	4.81E-02
212	GO:0071281: cellular response to iron ion	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0070566: adenylyltransferase activity	0.00E+00
3	GO:0008987: quinolinate synthetase A activity	0.00E+00
4	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
5	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
7	GO:0009922: fatty acid elongase activity	3.95E-11
8	GO:0070330: aromatase activity	8.01E-08
9	GO:0046423: allene-oxide cyclase activity	8.01E-08
10	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.50E-07
11	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.50E-07
12	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.50E-07
13	GO:0018685: alkane 1-monooxygenase activity	2.48E-06
14	GO:0016629: 12-oxophytodienoate reductase activity	8.17E-06
15	GO:0016621: cinnamoyl-CoA reductase activity	4.10E-04
16	GO:0090422: thiamine pyrophosphate transporter activity	4.29E-04
17	GO:0004657: proline dehydrogenase activity	4.29E-04
18	GO:0052631: sphingolipid delta-8 desaturase activity	4.29E-04
19	GO:0005534: galactose binding	4.29E-04
20	GO:0030544: Hsp70 protein binding	4.29E-04
21	GO:0004348: glucosylceramidase activity	4.29E-04
22	GO:0090440: abscisic acid transporter activity	4.29E-04
23	GO:0031957: very long-chain fatty acid-CoA ligase activity	4.29E-04
24	GO:0015245: fatty acid transporter activity	4.29E-04
25	GO:0042736: NADH kinase activity	4.29E-04
26	GO:0003839: gamma-glutamylcyclotransferase activity	9.27E-04
27	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	9.27E-04
28	GO:0015117: thiosulfate transmembrane transporter activity	9.27E-04
29	GO:1901677: phosphate transmembrane transporter activity	9.27E-04
30	GO:0004103: choline kinase activity	9.27E-04
31	GO:0008883: glutamyl-tRNA reductase activity	9.27E-04
32	GO:0001047: core promoter binding	9.27E-04
33	GO:0042389: omega-3 fatty acid desaturase activity	9.27E-04
34	GO:0017040: ceramidase activity	9.27E-04
35	GO:0047274: galactinol-sucrose galactosyltransferase activity	1.51E-03
36	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.51E-03
37	GO:0015141: succinate transmembrane transporter activity	1.51E-03
38	GO:0004383: guanylate cyclase activity	1.51E-03
39	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.51E-03
40	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.51E-03
41	GO:0004351: glutamate decarboxylase activity	2.18E-03
42	GO:0052655: L-valine transaminase activity	2.18E-03
43	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.18E-03
44	GO:0001653: peptide receptor activity	2.18E-03
45	GO:0015131: oxaloacetate transmembrane transporter activity	2.18E-03
46	GO:0035250: UDP-galactosyltransferase activity	2.18E-03
47	GO:0005432: calcium:sodium antiporter activity	2.18E-03
48	GO:0052656: L-isoleucine transaminase activity	2.18E-03
49	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	2.18E-03
50	GO:0052654: L-leucine transaminase activity	2.18E-03
51	GO:0004084: branched-chain-amino-acid transaminase activity	2.93E-03
52	GO:0008526: phosphatidylinositol transporter activity	2.93E-03
53	GO:0050378: UDP-glucuronate 4-epimerase activity	2.93E-03
54	GO:0015297: antiporter activity	3.06E-03
55	GO:0043565: sequence-specific DNA binding	3.26E-03
56	GO:0008381: mechanically-gated ion channel activity	3.76E-03
57	GO:0080122: AMP transmembrane transporter activity	3.76E-03
58	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.76E-03
59	GO:0004029: aldehyde dehydrogenase (NAD) activity	4.65E-03
60	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	4.65E-03
61	GO:0010181: FMN binding	5.14E-03
62	GO:0044212: transcription regulatory region DNA binding	5.18E-03
63	GO:0045330: aspartyl esterase activity	5.29E-03
64	GO:0015217: ADP transmembrane transporter activity	5.60E-03
65	GO:0051753: mannan synthase activity	5.60E-03
66	GO:0102391: decanoate--CoA ligase activity	5.60E-03
67	GO:0005347: ATP transmembrane transporter activity	5.60E-03
68	GO:0102425: myricetin 3-O-glucosyltransferase activity	6.62E-03
69	GO:0102360: daphnetin 3-O-glucosyltransferase activity	6.62E-03
70	GO:0004427: inorganic diphosphatase activity	6.62E-03
71	GO:0015140: malate transmembrane transporter activity	6.62E-03
72	GO:0019899: enzyme binding	6.62E-03
73	GO:0004467: long-chain fatty acid-CoA ligase activity	6.62E-03
74	GO:0030599: pectinesterase activity	6.75E-03
75	GO:0016746: transferase activity, transferring acyl groups	7.57E-03
76	GO:0004564: beta-fructofuranosidase activity	7.71E-03
77	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.71E-03
78	GO:0015491: cation:cation antiporter activity	7.71E-03
79	GO:0005267: potassium channel activity	8.84E-03
80	GO:0003951: NAD+ kinase activity	8.84E-03
81	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	8.84E-03
82	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.00E-02
83	GO:0004004: ATP-dependent RNA helicase activity	1.01E-02
84	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.13E-02
85	GO:0004575: sucrose alpha-glucosidase activity	1.13E-02
86	GO:0008047: enzyme activator activity	1.26E-02
87	GO:0004864: protein phosphatase inhibitor activity	1.26E-02
88	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.30E-02
89	GO:0004722: protein serine/threonine phosphatase activity	1.34E-02
90	GO:0015116: sulfate transmembrane transporter activity	1.54E-02
91	GO:0005262: calcium channel activity	1.69E-02
92	GO:0019888: protein phosphatase regulator activity	1.69E-02
93	GO:0015114: phosphate ion transmembrane transporter activity	1.69E-02
94	GO:0000175: 3'-5'-exoribonuclease activity	1.69E-02
95	GO:0005315: inorganic phosphate transmembrane transporter activity	1.69E-02
96	GO:0009055: electron carrier activity	1.78E-02
97	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.95E-02
98	GO:0005516: calmodulin binding	2.44E-02
99	GO:0051087: chaperone binding	2.49E-02
100	GO:0008289: lipid binding	2.62E-02
101	GO:0035251: UDP-glucosyltransferase activity	2.66E-02
102	GO:0004540: ribonuclease activity	2.66E-02
103	GO:0004707: MAP kinase activity	2.66E-02
104	GO:0004842: ubiquitin-protein transferase activity	2.72E-02
105	GO:0031625: ubiquitin protein ligase binding	2.75E-02
106	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.84E-02
107	GO:0016760: cellulose synthase (UDP-forming) activity	3.02E-02
108	GO:0008514: organic anion transmembrane transporter activity	3.20E-02
109	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.23E-02
110	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.23E-02
111	GO:0018024: histone-lysine N-methyltransferase activity	3.39E-02
112	GO:0052689: carboxylic ester hydrolase activity	3.77E-02
113	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.81E-02
114	GO:0050662: coenzyme binding	3.98E-02
115	GO:0003677: DNA binding	4.28E-02
116	GO:0016758: transferase activity, transferring hexosyl groups	4.30E-02
117	GO:0004518: nuclease activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0046658: anchored component of plasma membrane	2.51E-04
3	GO:0009923: fatty acid elongase complex	4.29E-04
4	GO:0042170: plastid membrane	9.27E-04
5	GO:0031225: anchored component of membrane	9.39E-04
6	GO:0009897: external side of plasma membrane	1.51E-03
7	GO:0009331: glycerol-3-phosphate dehydrogenase complex	2.18E-03
8	GO:0000178: exosome (RNase complex)	3.76E-03
9	GO:0005743: mitochondrial inner membrane	3.92E-03
10	GO:0030173: integral component of Golgi membrane	5.60E-03
11	GO:0032580: Golgi cisterna membrane	7.18E-03
12	GO:0005778: peroxisomal membrane	7.62E-03
13	GO:0016021: integral component of membrane	9.17E-03
14	GO:0016604: nuclear body	1.13E-02
15	GO:0000159: protein phosphatase type 2A complex	1.40E-02
16	GO:0009505: plant-type cell wall	2.27E-02
17	GO:0005768: endosome	3.35E-02
18	GO:0000790: nuclear chromatin	3.39E-02
19	GO:0009706: chloroplast inner membrane	3.54E-02
20	GO:0005783: endoplasmic reticulum	3.60E-02
21	GO:0005886: plasma membrane	3.68E-02
22	GO:0005770: late endosome	3.78E-02
23	GO:0005694: chromosome	4.60E-02