co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G27720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0010392: galactoglucomannan metabolic process	0.00E+00
3	GO:0051070: galactomannan biosynthetic process	0.00E+00
4	GO:0051569: regulation of histone H3-K4 methylation	0.00E+00
5	GO:0046474: glycerophospholipid biosynthetic process	0.00E+00
6	GO:0031338: regulation of vesicle fusion	1.04E-04
7	GO:0015786: UDP-glucose transport	2.44E-04
8	GO:0044210: 'de novo' CTP biosynthetic process	4.05E-04
9	GO:0090630: activation of GTPase activity	4.05E-04
10	GO:0015783: GDP-fucose transport	4.05E-04
11	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.92E-04
12	GO:0072334: UDP-galactose transmembrane transport	5.82E-04
13	GO:0046355: mannan catabolic process	7.73E-04
14	GO:0032957: inositol trisphosphate metabolic process	9.77E-04
15	GO:0009823: cytokinin catabolic process	9.77E-04
16	GO:0006656: phosphatidylcholine biosynthetic process	9.77E-04
17	GO:0009828: plant-type cell wall loosening	9.85E-04
18	GO:0006655: phosphatidylglycerol biosynthetic process	1.19E-03
19	GO:0047484: regulation of response to osmotic stress	1.19E-03
20	GO:0009739: response to gibberellin	1.29E-03
21	GO:2000033: regulation of seed dormancy process	1.43E-03
22	GO:0010103: stomatal complex morphogenesis	1.67E-03
23	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.93E-03
24	GO:0009690: cytokinin metabolic process	1.93E-03
25	GO:0035265: organ growth	1.93E-03
26	GO:0016571: histone methylation	2.79E-03
27	GO:0009664: plant-type cell wall organization	3.05E-03
28	GO:0009641: shade avoidance	3.10E-03
29	GO:0006949: syncytium formation	3.10E-03
30	GO:0010192: mucilage biosynthetic process	3.10E-03
31	GO:0015706: nitrate transport	3.75E-03
32	GO:0043086: negative regulation of catalytic activity	3.86E-03
33	GO:0010102: lateral root morphogenesis	4.09E-03
34	GO:0009624: response to nematode	4.64E-03
35	GO:0006979: response to oxidative stress	5.16E-03
36	GO:0009833: plant-type primary cell wall biogenesis	5.18E-03
37	GO:0006289: nucleotide-excision repair	5.56E-03
38	GO:2000377: regulation of reactive oxygen species metabolic process	5.56E-03
39	GO:0009863: salicylic acid mediated signaling pathway	5.56E-03
40	GO:0010187: negative regulation of seed germination	5.56E-03
41	GO:0006825: copper ion transport	5.95E-03
42	GO:0009058: biosynthetic process	6.11E-03
43	GO:0010214: seed coat development	7.61E-03
44	GO:0006284: base-excision repair	7.61E-03
45	GO:0070417: cellular response to cold	8.05E-03
46	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.05E-03
47	GO:0042631: cellular response to water deprivation	8.49E-03
48	GO:0045489: pectin biosynthetic process	8.95E-03
49	GO:0006470: protein dephosphorylation	9.15E-03
50	GO:0006891: intra-Golgi vesicle-mediated transport	1.04E-02
51	GO:1901657: glycosyl compound metabolic process	1.14E-02
52	GO:0009826: unidimensional cell growth	1.19E-02
53	GO:0019760: glucosinolate metabolic process	1.19E-02
54	GO:0010029: regulation of seed germination	1.40E-02
55	GO:0009723: response to ethylene	1.44E-02
56	GO:0006974: cellular response to DNA damage stimulus	1.45E-02
57	GO:0042128: nitrate assimilation	1.45E-02
58	GO:0080167: response to karrikin	1.54E-02
59	GO:0010200: response to chitin	1.59E-02
60	GO:0007568: aging	1.80E-02
61	GO:0009910: negative regulation of flower development	1.80E-02
62	GO:0009631: cold acclimation	1.80E-02
63	GO:0006886: intracellular protein transport	1.90E-02
64	GO:0009867: jasmonic acid mediated signaling pathway	1.92E-02
65	GO:0016051: carbohydrate biosynthetic process	1.92E-02
66	GO:0016310: phosphorylation	1.97E-02
67	GO:0006897: endocytosis	2.17E-02
68	GO:0006631: fatty acid metabolic process	2.17E-02
69	GO:0010114: response to red light	2.30E-02
70	GO:0009640: photomorphogenesis	2.30E-02
71	GO:0042546: cell wall biogenesis	2.37E-02
72	GO:0009733: response to auxin	2.44E-02
73	GO:0008152: metabolic process	2.51E-02
74	GO:0006260: DNA replication	2.64E-02
75	GO:0042538: hyperosmotic salinity response	2.70E-02
76	GO:0009740: gibberellic acid mediated signaling pathway	3.50E-02
77	GO:0006351: transcription, DNA-templated	3.66E-02
78	GO:0009742: brassinosteroid mediated signaling pathway	3.81E-02

Rank	GO Term	Adjusted P value
1	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
2	GO:0003883: CTP synthase activity	5.09E-06
3	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	1.04E-04
4	GO:0004105: choline-phosphate cytidylyltransferase activity	1.04E-04
5	GO:0008444: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity	1.04E-04
6	GO:0017169: CDP-alcohol phosphatidyltransferase activity	1.04E-04
7	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.44E-04
8	GO:0048531: beta-1,3-galactosyltransferase activity	2.44E-04
9	GO:0005457: GDP-fucose transmembrane transporter activity	4.05E-04
10	GO:0047325: inositol tetrakisphosphate 1-kinase activity	4.05E-04
11	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	4.05E-04
12	GO:0005460: UDP-glucose transmembrane transporter activity	5.82E-04
13	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	5.82E-04
14	GO:0016985: mannan endo-1,4-beta-mannosidase activity	7.73E-04
15	GO:0019104: DNA N-glycosylase activity	7.73E-04
16	GO:0000993: RNA polymerase II core binding	7.73E-04
17	GO:0005459: UDP-galactose transmembrane transporter activity	9.77E-04
18	GO:0019139: cytokinin dehydrogenase activity	9.77E-04
19	GO:0017137: Rab GTPase binding	9.77E-04
20	GO:0046910: pectinesterase inhibitor activity	1.03E-03
21	GO:0016209: antioxidant activity	1.93E-03
22	GO:0000989: transcription factor activity, transcription factor binding	2.49E-03
23	GO:0015112: nitrate transmembrane transporter activity	2.79E-03
24	GO:0005543: phospholipid binding	3.42E-03
25	GO:0008378: galactosyltransferase activity	3.75E-03
26	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.44E-03
27	GO:0030570: pectate lyase activity	7.18E-03
28	GO:0001085: RNA polymerase II transcription factor binding	8.95E-03
29	GO:0016757: transferase activity, transferring glycosyl groups	9.99E-03
30	GO:0003684: damaged DNA binding	1.19E-02
31	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.23E-02
32	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.24E-02
33	GO:0008375: acetylglucosaminyltransferase activity	1.45E-02
34	GO:0102483: scopolin beta-glucosidase activity	1.51E-02
35	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.65E-02
36	GO:0005096: GTPase activator activity	1.68E-02
37	GO:0004222: metalloendopeptidase activity	1.74E-02
38	GO:0030145: manganese ion binding	1.80E-02
39	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.80E-02
40	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.80E-02
41	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.92E-02
42	GO:0043565: sequence-specific DNA binding	2.01E-02
43	GO:0004722: protein serine/threonine phosphatase activity	2.02E-02
44	GO:0008422: beta-glucosidase activity	2.04E-02
45	GO:0044212: transcription regulatory region DNA binding	2.11E-02
46	GO:0003690: double-stranded DNA binding	2.91E-02
47	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.43E-02
48	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.43E-02
49	GO:0016874: ligase activity	3.50E-02
50	GO:0022857: transmembrane transporter activity	3.50E-02
51	GO:0016758: transferase activity, transferring hexosyl groups	4.21E-02
52	GO:0016829: lyase activity	4.54E-02
53	GO:0004252: serine-type endopeptidase activity	4.62E-02
54	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.70E-02
55	GO:0008565: protein transporter activity	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0031357: integral component of chloroplast inner membrane	2.44E-04
2	GO:0016593: Cdc73/Paf1 complex	7.73E-04
3	GO:0031090: organelle membrane	2.49E-03
4	GO:0031012: extracellular matrix	4.09E-03
5	GO:0005795: Golgi stack	4.80E-03
6	GO:0005905: clathrin-coated pit	6.35E-03
7	GO:0030136: clathrin-coated vesicle	8.05E-03
8	GO:0000139: Golgi membrane	8.07E-03
9	GO:0005667: transcription factor complex	1.45E-02
10	GO:0031225: anchored component of membrane	1.52E-02
11	GO:0005622: intracellular	1.79E-02
12	GO:0043231: intracellular membrane-bounded organelle	2.51E-02
13	GO:0016607: nuclear speck	3.28E-02
14	GO:0012505: endomembrane system	3.58E-02
15	GO:0005654: nucleoplasm	4.21E-02