GO Enrichment Analysis of Co-expressed Genes with
AT4G27690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901799: negative regulation of proteasomal protein catabolic process | 0.00E+00 |
| 2 | GO:0048870: cell motility | 0.00E+00 |
| 3 | GO:0016031: tRNA import into mitochondrion | 4.18E-05 |
| 4 | GO:0009240: isopentenyl diphosphate biosynthetic process | 4.18E-05 |
| 5 | GO:0007163: establishment or maintenance of cell polarity | 1.04E-04 |
| 6 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.04E-04 |
| 7 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 1.04E-04 |
| 8 | GO:0006760: folic acid-containing compound metabolic process | 1.78E-04 |
| 9 | GO:0015031: protein transport | 1.97E-04 |
| 10 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.63E-04 |
| 11 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.42E-04 |
| 12 | GO:0030041: actin filament polymerization | 4.50E-04 |
| 13 | GO:0033365: protein localization to organelle | 5.51E-04 |
| 14 | GO:0006506: GPI anchor biosynthetic process | 8.84E-04 |
| 15 | GO:0000028: ribosomal small subunit assembly | 8.84E-04 |
| 16 | GO:0045010: actin nucleation | 8.84E-04 |
| 17 | GO:0010099: regulation of photomorphogenesis | 1.00E-03 |
| 18 | GO:0015996: chlorophyll catabolic process | 1.00E-03 |
| 19 | GO:0048589: developmental growth | 1.13E-03 |
| 20 | GO:0000902: cell morphogenesis | 1.13E-03 |
| 21 | GO:0010267: production of ta-siRNAs involved in RNA interference | 1.25E-03 |
| 22 | GO:0010015: root morphogenesis | 1.53E-03 |
| 23 | GO:0016925: protein sumoylation | 1.67E-03 |
| 24 | GO:0071365: cellular response to auxin stimulus | 1.67E-03 |
| 25 | GO:0006829: zinc II ion transport | 1.82E-03 |
| 26 | GO:0002237: response to molecule of bacterial origin | 1.97E-03 |
| 27 | GO:0010039: response to iron ion | 2.13E-03 |
| 28 | GO:0042753: positive regulation of circadian rhythm | 2.29E-03 |
| 29 | GO:0006406: mRNA export from nucleus | 2.46E-03 |
| 30 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.46E-03 |
| 31 | GO:0008299: isoprenoid biosynthetic process | 2.62E-03 |
| 32 | GO:0010431: seed maturation | 2.80E-03 |
| 33 | GO:0061077: chaperone-mediated protein folding | 2.80E-03 |
| 34 | GO:0016226: iron-sulfur cluster assembly | 2.97E-03 |
| 35 | GO:0007005: mitochondrion organization | 2.97E-03 |
| 36 | GO:0015991: ATP hydrolysis coupled proton transport | 3.71E-03 |
| 37 | GO:0031047: gene silencing by RNA | 4.72E-03 |
| 38 | GO:0016192: vesicle-mediated transport | 4.84E-03 |
| 39 | GO:0010090: trichome morphogenesis | 4.93E-03 |
| 40 | GO:0006914: autophagy | 5.15E-03 |
| 41 | GO:0010286: heat acclimation | 5.36E-03 |
| 42 | GO:0006906: vesicle fusion | 6.27E-03 |
| 43 | GO:0015995: chlorophyll biosynthetic process | 6.50E-03 |
| 44 | GO:0048573: photoperiodism, flowering | 6.50E-03 |
| 45 | GO:0046686: response to cadmium ion | 7.97E-03 |
| 46 | GO:0030001: metal ion transport | 9.01E-03 |
| 47 | GO:0006887: exocytosis | 9.28E-03 |
| 48 | GO:0009585: red, far-red light phototransduction | 1.21E-02 |
| 49 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.24E-02 |
| 50 | GO:0000398: mRNA splicing, via spliceosome | 1.72E-02 |
| 51 | GO:0007623: circadian rhythm | 2.29E-02 |
| 52 | GO:0010150: leaf senescence | 2.29E-02 |
| 53 | GO:0008380: RNA splicing | 2.60E-02 |
| 54 | GO:0015979: photosynthesis | 4.01E-02 |
| 55 | GO:0006886: intracellular protein transport | 4.24E-02 |
| 56 | GO:0032259: methylation | 4.67E-02 |
| 57 | GO:0016042: lipid catabolic process | 4.71E-02 |
| 58 | GO:0009408: response to heat | 4.81E-02 |
| 59 | GO:0006397: mRNA processing | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004298: threonine-type endopeptidase activity | 1.87E-06 |
| 2 | GO:0102293: pheophytinase b activity | 4.18E-05 |
| 3 | GO:0004452: isopentenyl-diphosphate delta-isomerase activity | 4.18E-05 |
| 4 | GO:0019707: protein-cysteine S-acyltransferase activity | 4.18E-05 |
| 5 | GO:0004826: phenylalanine-tRNA ligase activity | 1.04E-04 |
| 6 | GO:0047746: chlorophyllase activity | 1.04E-04 |
| 7 | GO:0032403: protein complex binding | 1.78E-04 |
| 8 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 3.53E-04 |
| 9 | GO:0005496: steroid binding | 4.50E-04 |
| 10 | GO:0031386: protein tag | 4.50E-04 |
| 11 | GO:0008233: peptidase activity | 5.53E-04 |
| 12 | GO:0019887: protein kinase regulator activity | 6.58E-04 |
| 13 | GO:0008143: poly(A) binding | 7.69E-04 |
| 14 | GO:0008320: protein transmembrane transporter activity | 7.69E-04 |
| 15 | GO:0043621: protein self-association | 8.26E-04 |
| 16 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.00E-03 |
| 17 | GO:0001055: RNA polymerase II activity | 1.25E-03 |
| 18 | GO:0001054: RNA polymerase I activity | 1.53E-03 |
| 19 | GO:0001056: RNA polymerase III activity | 1.67E-03 |
| 20 | GO:0000049: tRNA binding | 1.67E-03 |
| 21 | GO:0015266: protein channel activity | 1.82E-03 |
| 22 | GO:0005528: FK506 binding | 2.46E-03 |
| 23 | GO:0008080: N-acetyltransferase activity | 3.91E-03 |
| 24 | GO:0046873: metal ion transmembrane transporter activity | 3.91E-03 |
| 25 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 4.51E-03 |
| 26 | GO:0008375: acetylglucosaminyltransferase activity | 6.27E-03 |
| 27 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.98E-03 |
| 28 | GO:0000149: SNARE binding | 8.75E-03 |
| 29 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.01E-03 |
| 30 | GO:0005484: SNAP receptor activity | 9.82E-03 |
| 31 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.09E-02 |
| 32 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.21E-02 |
| 33 | GO:0000166: nucleotide binding | 1.21E-02 |
| 34 | GO:0022857: transmembrane transporter activity | 1.49E-02 |
| 35 | GO:0008017: microtubule binding | 2.37E-02 |
| 36 | GO:0042802: identical protein binding | 2.72E-02 |
| 37 | GO:0008168: methyltransferase activity | 3.05E-02 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 3.17E-02 |
| 39 | GO:0052689: carboxylic ester hydrolase activity | 3.92E-02 |
| 40 | GO:0005515: protein binding | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097361: CIA complex | 0.00E+00 |
| 2 | GO:0005839: proteasome core complex | 1.87E-06 |
| 3 | GO:0000502: proteasome complex | 2.02E-06 |
| 4 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.85E-05 |
| 5 | GO:0005829: cytosol | 1.53E-04 |
| 6 | GO:0005838: proteasome regulatory particle | 1.78E-04 |
| 7 | GO:0005956: protein kinase CK2 complex | 2.63E-04 |
| 8 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 3.53E-04 |
| 9 | GO:0000445: THO complex part of transcription export complex | 3.53E-04 |
| 10 | GO:0031209: SCAR complex | 5.51E-04 |
| 11 | GO:0000347: THO complex | 7.69E-04 |
| 12 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 7.69E-04 |
| 13 | GO:0000421: autophagosome membrane | 8.84E-04 |
| 14 | GO:0031901: early endosome membrane | 1.13E-03 |
| 15 | GO:0005763: mitochondrial small ribosomal subunit | 1.13E-03 |
| 16 | GO:0005736: DNA-directed RNA polymerase I complex | 1.13E-03 |
| 17 | GO:0005666: DNA-directed RNA polymerase III complex | 1.25E-03 |
| 18 | GO:0005789: endoplasmic reticulum membrane | 1.52E-03 |
| 19 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.67E-03 |
| 20 | GO:0000419: DNA-directed RNA polymerase V complex | 2.29E-03 |
| 21 | GO:0031410: cytoplasmic vesicle | 2.97E-03 |
| 22 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.33E-03 |
| 23 | GO:0071944: cell periphery | 4.93E-03 |
| 24 | GO:0032580: Golgi cisterna membrane | 5.15E-03 |
| 25 | GO:0005788: endoplasmic reticulum lumen | 6.04E-03 |
| 26 | GO:0031201: SNARE complex | 9.28E-03 |
| 27 | GO:0005773: vacuole | 1.01E-02 |
| 28 | GO:0005856: cytoskeleton | 1.07E-02 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 1.39E-02 |
| 30 | GO:0016607: nuclear speck | 1.39E-02 |
| 31 | GO:0005834: heterotrimeric G-protein complex | 1.43E-02 |
| 32 | GO:0012505: endomembrane system | 1.52E-02 |
| 33 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.65E-02 |
| 34 | GO:0009543: chloroplast thylakoid lumen | 1.82E-02 |
| 35 | GO:0016020: membrane | 2.17E-02 |
| 36 | GO:0009536: plastid | 3.01E-02 |
| 37 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.34E-02 |
| 38 | GO:0005874: microtubule | 3.56E-02 |
| 39 | GO:0031969: chloroplast membrane | 3.65E-02 |
| 40 | GO:0005730: nucleolus | 4.13E-02 |
| 41 | GO:0005737: cytoplasm | 4.35E-02 |