co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G27180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:0009451: RNA modification	4.22E-07
4	GO:0042371: vitamin K biosynthetic process	1.00E-04
5	GO:0001736: establishment of planar polarity	2.36E-04
6	GO:0010024: phytochromobilin biosynthetic process	2.36E-04
7	GO:0001578: microtubule bundle formation	3.92E-04
8	GO:0009650: UV protection	5.64E-04
9	GO:0009102: biotin biosynthetic process	5.64E-04
10	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.64E-04
11	GO:0071483: cellular response to blue light	7.50E-04
12	GO:0051322: anaphase	7.50E-04
13	GO:0007020: microtubule nucleation	7.50E-04
14	GO:0046785: microtubule polymerization	9.47E-04
15	GO:0016558: protein import into peroxisome matrix	9.47E-04
16	GO:0016123: xanthophyll biosynthetic process	9.47E-04
17	GO:0010190: cytochrome b6f complex assembly	1.16E-03
18	GO:0032973: amino acid export	1.16E-03
19	GO:0009793: embryo development ending in seed dormancy	1.25E-03
20	GO:0010019: chloroplast-nucleus signaling pathway	1.38E-03
21	GO:1901259: chloroplast rRNA processing	1.38E-03
22	GO:0048528: post-embryonic root development	1.62E-03
23	GO:0043090: amino acid import	1.62E-03
24	GO:0006605: protein targeting	1.87E-03
25	GO:0010492: maintenance of shoot apical meristem identity	1.87E-03
26	GO:0042255: ribosome assembly	1.87E-03
27	GO:0006353: DNA-templated transcription, termination	1.87E-03
28	GO:0071482: cellular response to light stimulus	2.14E-03
29	GO:0080144: amino acid homeostasis	2.41E-03
30	GO:0010112: regulation of systemic acquired resistance	2.41E-03
31	GO:0000373: Group II intron splicing	2.41E-03
32	GO:0006098: pentose-phosphate shunt	2.41E-03
33	GO:0048507: meristem development	2.41E-03
34	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.00E-03
35	GO:0048829: root cap development	3.00E-03
36	GO:1903507: negative regulation of nucleic acid-templated transcription	3.31E-03
37	GO:0006352: DNA-templated transcription, initiation	3.31E-03
38	GO:0048765: root hair cell differentiation	3.31E-03
39	GO:0009773: photosynthetic electron transport in photosystem I	3.31E-03
40	GO:0010628: positive regulation of gene expression	3.95E-03
41	GO:0006094: gluconeogenesis	3.95E-03
42	GO:2000012: regulation of auxin polar transport	3.95E-03
43	GO:0090351: seedling development	4.64E-03
44	GO:0006863: purine nucleobase transport	5.00E-03
45	GO:0006289: nucleotide-excision repair	5.37E-03
46	GO:0043622: cortical microtubule organization	5.75E-03
47	GO:0007017: microtubule-based process	5.75E-03
48	GO:0003333: amino acid transmembrane transport	6.14E-03
49	GO:0048511: rhythmic process	6.14E-03
50	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.54E-03
51	GO:0080092: regulation of pollen tube growth	6.54E-03
52	GO:0009411: response to UV	6.94E-03
53	GO:0009306: protein secretion	7.35E-03
54	GO:0008033: tRNA processing	8.21E-03
55	GO:0009958: positive gravitropism	8.65E-03
56	GO:0048868: pollen tube development	8.65E-03
57	GO:0007166: cell surface receptor signaling pathway	8.71E-03
58	GO:0005975: carbohydrate metabolic process	8.90E-03
59	GO:0006814: sodium ion transport	9.10E-03
60	GO:0042752: regulation of circadian rhythm	9.10E-03
61	GO:0006635: fatty acid beta-oxidation	1.00E-02
62	GO:0010193: response to ozone	1.00E-02
63	GO:0010583: response to cyclopentenone	1.05E-02
64	GO:0016032: viral process	1.05E-02
65	GO:0032502: developmental process	1.05E-02
66	GO:0000910: cytokinesis	1.25E-02
67	GO:0001666: response to hypoxia	1.30E-02
68	GO:0010027: thylakoid membrane organization	1.30E-02
69	GO:0000160: phosphorelay signal transduction system	1.62E-02
70	GO:0010311: lateral root formation	1.62E-02
71	GO:0006865: amino acid transport	1.80E-02
72	GO:0006952: defense response	2.12E-02
73	GO:0008283: cell proliferation	2.22E-02
74	GO:0009926: auxin polar transport	2.22E-02
75	GO:0031347: regulation of defense response	2.55E-02
76	GO:0009664: plant-type cell wall organization	2.61E-02
77	GO:0009736: cytokinin-activated signaling pathway	2.75E-02
78	GO:0010224: response to UV-B	2.81E-02
79	GO:0006096: glycolytic process	3.09E-02
80	GO:0048316: seed development	3.17E-02
81	GO:0009553: embryo sac development	3.46E-02
82	GO:0009624: response to nematode	3.53E-02
83	GO:0009416: response to light stimulus	3.84E-02
84	GO:0009555: pollen development	3.84E-02
85	GO:0009611: response to wounding	3.92E-02
86	GO:0042744: hydrogen peroxide catabolic process	4.54E-02
87	GO:0009790: embryo development	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0004076: biotin synthase activity	0.00E+00
4	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
5	GO:0042623: ATPase activity, coupled	0.00E+00
6	GO:0004519: endonuclease activity	1.12E-05
7	GO:0008508: bile acid:sodium symporter activity	5.64E-04
8	GO:0001053: plastid sigma factor activity	7.50E-04
9	GO:0010011: auxin binding	7.50E-04
10	GO:0016987: sigma factor activity	7.50E-04
11	GO:0010328: auxin influx transmembrane transporter activity	7.50E-04
12	GO:0004332: fructose-bisphosphate aldolase activity	1.16E-03
13	GO:0042578: phosphoric ester hydrolase activity	1.16E-03
14	GO:0008195: phosphatidate phosphatase activity	1.38E-03
15	GO:0003723: RNA binding	1.53E-03
16	GO:0003690: double-stranded DNA binding	3.22E-03
17	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.31E-03
18	GO:0003777: microtubule motor activity	3.44E-03
19	GO:0015171: amino acid transmembrane transporter activity	3.44E-03
20	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.30E-03
21	GO:0003714: transcription corepressor activity	5.37E-03
22	GO:0019843: rRNA binding	5.52E-03
23	GO:0005345: purine nucleobase transmembrane transporter activity	5.75E-03
24	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.10E-03
25	GO:0003727: single-stranded RNA binding	7.35E-03
26	GO:0008017: microtubule binding	7.97E-03
27	GO:0004518: nuclease activity	1.05E-02
28	GO:0000156: phosphorelay response regulator activity	1.10E-02
29	GO:0004601: peroxidase activity	1.18E-02
30	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.57E-02
31	GO:0005096: GTPase activator activity	1.62E-02
32	GO:0050897: cobalt ion binding	1.74E-02
33	GO:0004871: signal transducer activity	1.84E-02
34	GO:0003993: acid phosphatase activity	1.91E-02
35	GO:0051539: 4 iron, 4 sulfur cluster binding	2.03E-02
36	GO:0004364: glutathione transferase activity	2.16E-02
37	GO:0005215: transporter activity	2.25E-02
38	GO:0051537: 2 iron, 2 sulfur cluster binding	2.35E-02
39	GO:0015293: symporter activity	2.41E-02
40	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.75E-02
41	GO:0016491: oxidoreductase activity	2.80E-02
42	GO:0004650: polygalacturonase activity	3.31E-02
43	GO:0016874: ligase activity	3.38E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.67E-07
2	GO:0009531: secondary cell wall	5.64E-04
3	GO:0042646: plastid nucleoid	5.64E-04
4	GO:0030286: dynein complex	7.50E-04
5	GO:0043231: intracellular membrane-bounded organelle	7.95E-04
6	GO:0072686: mitotic spindle	9.47E-04
7	GO:0009840: chloroplastic endopeptidase Clp complex	1.38E-03
8	GO:0010005: cortical microtubule, transverse to long axis	1.38E-03
9	GO:0009986: cell surface	1.62E-03
10	GO:0005819: spindle	1.97E-03
11	GO:0042644: chloroplast nucleoid	2.41E-03
12	GO:0055028: cortical microtubule	3.00E-03
13	GO:0016324: apical plasma membrane	3.00E-03
14	GO:0090404: pollen tube tip	3.31E-03
15	GO:0009574: preprophase band	3.95E-03
16	GO:0005938: cell cortex	3.95E-03
17	GO:0030095: chloroplast photosystem II	4.30E-03
18	GO:0009535: chloroplast thylakoid membrane	4.43E-03
19	GO:0005875: microtubule associated complex	5.00E-03
20	GO:0009543: chloroplast thylakoid lumen	5.52E-03
21	GO:0042651: thylakoid membrane	5.75E-03
22	GO:0009654: photosystem II oxygen evolving complex	5.75E-03
23	GO:0019898: extrinsic component of membrane	9.56E-03
24	GO:0005778: peroxisomal membrane	1.20E-02
25	GO:0005874: microtubule	1.42E-02
26	GO:0031225: anchored component of membrane	1.43E-02
27	GO:0005886: plasma membrane	4.29E-02
28	GO:0009524: phragmoplast	4.30E-02