co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
4	GO:0006511: ubiquitin-dependent protein catabolic process	1.53E-10
5	GO:0051603: proteolysis involved in cellular protein catabolic process	8.85E-07
6	GO:0048453: sepal formation	9.88E-05
7	GO:0031060: regulation of histone methylation	9.88E-05
8	GO:0006820: anion transport	1.72E-04
9	GO:0016925: protein sumoylation	1.72E-04
10	GO:0006626: protein targeting to mitochondrion	1.98E-04
11	GO:0051788: response to misfolded protein	2.32E-04
12	GO:0015786: UDP-glucose transport	2.32E-04
13	GO:0008333: endosome to lysosome transport	3.86E-04
14	GO:0046417: chorismate metabolic process	3.86E-04
15	GO:0015783: GDP-fucose transport	3.86E-04
16	GO:0010338: leaf formation	3.86E-04
17	GO:0010971: positive regulation of G2/M transition of mitotic cell cycle	5.54E-04
18	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	5.54E-04
19	GO:0009647: skotomorphogenesis	5.54E-04
20	GO:0006168: adenine salvage	5.54E-04
21	GO:0006882: cellular zinc ion homeostasis	5.54E-04
22	GO:0001676: long-chain fatty acid metabolic process	5.54E-04
23	GO:0046513: ceramide biosynthetic process	5.54E-04
24	GO:0006166: purine ribonucleoside salvage	5.54E-04
25	GO:0072334: UDP-galactose transmembrane transport	5.54E-04
26	GO:0000413: protein peptidyl-prolyl isomerization	5.80E-04
27	GO:0071219: cellular response to molecule of bacterial origin	7.37E-04
28	GO:0080142: regulation of salicylic acid biosynthetic process	7.37E-04
29	GO:0010387: COP9 signalosome assembly	7.37E-04
30	GO:0030163: protein catabolic process	8.66E-04
31	GO:0036065: fucosylation	9.32E-04
32	GO:0044209: AMP salvage	9.32E-04
33	GO:0045116: protein neddylation	9.32E-04
34	GO:0010358: leaf shaping	1.14E-03
35	GO:0043248: proteasome assembly	1.14E-03
36	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.18E-03
37	GO:0009612: response to mechanical stimulus	1.36E-03
38	GO:0009554: megasporogenesis	1.36E-03
39	GO:1901001: negative regulation of response to salt stress	1.36E-03
40	GO:0000338: protein deneddylation	1.59E-03
41	GO:0048528: post-embryonic root development	1.59E-03
42	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.84E-03
43	GO:0009690: cytokinin metabolic process	1.84E-03
44	GO:0031540: regulation of anthocyanin biosynthetic process	1.84E-03
45	GO:0006367: transcription initiation from RNA polymerase II promoter	2.10E-03
46	GO:0010100: negative regulation of photomorphogenesis	2.10E-03
47	GO:0006526: arginine biosynthetic process	2.10E-03
48	GO:0010093: specification of floral organ identity	2.10E-03
49	GO:0046686: response to cadmium ion	2.24E-03
50	GO:0010112: regulation of systemic acquired resistance	2.37E-03
51	GO:0098656: anion transmembrane transport	2.37E-03
52	GO:0046685: response to arsenic-containing substance	2.37E-03
53	GO:0042761: very long-chain fatty acid biosynthetic process	2.65E-03
54	GO:0010449: root meristem growth	2.65E-03
55	GO:0071577: zinc II ion transmembrane transport	2.65E-03
56	GO:1900426: positive regulation of defense response to bacterium	2.65E-03
57	GO:0010072: primary shoot apical meristem specification	3.25E-03
58	GO:0009073: aromatic amino acid family biosynthetic process	3.25E-03
59	GO:0048229: gametophyte development	3.25E-03
60	GO:0016485: protein processing	3.25E-03
61	GO:0048440: carpel development	4.22E-03
62	GO:0009933: meristem structural organization	4.22E-03
63	GO:0007034: vacuolar transport	4.22E-03
64	GO:0009969: xyloglucan biosynthetic process	4.57E-03
65	GO:0030150: protein import into mitochondrial matrix	5.28E-03
66	GO:0006289: nucleotide-excision repair	5.28E-03
67	GO:0009116: nucleoside metabolic process	5.28E-03
68	GO:0007005: mitochondrion organization	6.42E-03
69	GO:0010082: regulation of root meristem growth	6.82E-03
70	GO:0009908: flower development	6.91E-03
71	GO:0048443: stamen development	7.23E-03
72	GO:0042147: retrograde transport, endosome to Golgi	7.64E-03
73	GO:0010305: leaf vascular tissue pattern formation	8.50E-03
74	GO:0009617: response to bacterium	8.86E-03
75	GO:0006623: protein targeting to vacuole	9.39E-03
76	GO:0010183: pollen tube guidance	9.39E-03
77	GO:0048825: cotyledon development	9.39E-03
78	GO:0009556: microsporogenesis	9.39E-03
79	GO:0002229: defense response to oomycetes	9.85E-03
80	GO:0010193: response to ozone	9.85E-03
81	GO:0080156: mitochondrial mRNA modification	9.85E-03
82	GO:0010286: heat acclimation	1.18E-02
83	GO:0007275: multicellular organism development	1.27E-02
84	GO:0016049: cell growth	1.49E-02
85	GO:0009817: defense response to fungus, incompatible interaction	1.54E-02
86	GO:0009832: plant-type cell wall biogenesis	1.60E-02
87	GO:0009793: embryo development ending in seed dormancy	1.62E-02
88	GO:0006811: ion transport	1.65E-02
89	GO:0010043: response to zinc ion	1.71E-02
90	GO:0030001: metal ion transport	2.00E-02
91	GO:0032259: methylation	2.02E-02
92	GO:0006631: fatty acid metabolic process	2.06E-02
93	GO:0009408: response to heat	2.11E-02
94	GO:0009640: photomorphogenesis	2.18E-02
95	GO:0008283: cell proliferation	2.18E-02
96	GO:0009926: auxin polar transport	2.18E-02
97	GO:0048364: root development	2.21E-02
98	GO:0009733: response to auxin	2.23E-02
99	GO:0031347: regulation of defense response	2.50E-02
100	GO:0009846: pollen germination	2.57E-02
101	GO:0006486: protein glycosylation	2.70E-02
102	GO:0009585: red, far-red light phototransduction	2.70E-02
103	GO:0009736: cytokinin-activated signaling pathway	2.70E-02
104	GO:0010224: response to UV-B	2.77E-02
105	GO:0009909: regulation of flower development	2.90E-02
106	GO:0009626: plant-type hypersensitive response	3.18E-02
107	GO:0009553: embryo sac development	3.39E-02
108	GO:0000398: mRNA splicing, via spliceosome	3.84E-02
109	GO:0006457: protein folding	4.83E-02
110	GO:0006413: translational initiation	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0008777: acetylornithine deacetylase activity	0.00E+00
2	GO:0016881: acid-amino acid ligase activity	0.00E+00
3	GO:0004298: threonine-type endopeptidase activity	2.15E-18
4	GO:0008233: peptidase activity	1.36E-13
5	GO:0031386: protein tag	1.46E-05
6	GO:0015288: porin activity	5.57E-05
7	GO:0008308: voltage-gated anion channel activity	7.06E-05
8	GO:0047326: inositol tetrakisphosphate 5-kinase activity	9.88E-05
9	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	9.88E-05
10	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	9.88E-05
11	GO:0035614: snRNA stem-loop binding	9.88E-05
12	GO:0000824: inositol tetrakisphosphate 3-kinase activity	9.88E-05
13	GO:0008805: carbon-monoxide oxygenase activity	2.32E-04
14	GO:0018708: thiol S-methyltransferase activity	2.32E-04
15	GO:0004106: chorismate mutase activity	2.32E-04
16	GO:0030619: U1 snRNA binding	2.32E-04
17	GO:0050291: sphingosine N-acyltransferase activity	2.32E-04
18	GO:0019781: NEDD8 activating enzyme activity	2.32E-04
19	GO:0005457: GDP-fucose transmembrane transporter activity	3.86E-04
20	GO:0008430: selenium binding	3.86E-04
21	GO:0003999: adenine phosphoribosyltransferase activity	5.54E-04
22	GO:0005460: UDP-glucose transmembrane transporter activity	5.54E-04
23	GO:0070628: proteasome binding	7.37E-04
24	GO:0008641: small protein activating enzyme activity	9.32E-04
25	GO:0005459: UDP-galactose transmembrane transporter activity	9.32E-04
26	GO:0008237: metallopeptidase activity	9.73E-04
27	GO:0031593: polyubiquitin binding	1.14E-03
28	GO:0102391: decanoate--CoA ligase activity	1.36E-03
29	GO:0004656: procollagen-proline 4-dioxygenase activity	1.36E-03
30	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.40E-03
31	GO:0004467: long-chain fatty acid-CoA ligase activity	1.59E-03
32	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	1.59E-03
33	GO:0008235: metalloexopeptidase activity	1.59E-03
34	GO:0042162: telomeric DNA binding	1.59E-03
35	GO:0003746: translation elongation factor activity	1.77E-03
36	GO:0003697: single-stranded DNA binding	1.77E-03
37	GO:0008417: fucosyltransferase activity	2.37E-03
38	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.64E-03
39	GO:0008327: methyl-CpG binding	3.25E-03
40	GO:0004177: aminopeptidase activity	3.25E-03
41	GO:0015266: protein channel activity	3.89E-03
42	GO:0003712: transcription cofactor activity	4.57E-03
43	GO:0031418: L-ascorbic acid binding	5.28E-03
44	GO:0005385: zinc ion transmembrane transporter activity	5.28E-03
45	GO:0043130: ubiquitin binding	5.28E-03
46	GO:0008514: organic anion transmembrane transporter activity	7.23E-03
47	GO:0046873: metal ion transmembrane transporter activity	8.50E-03
48	GO:0008168: methyltransferase activity	1.11E-02
49	GO:0003684: damaged DNA binding	1.13E-02
50	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.82E-02
51	GO:0003993: acid phosphatase activity	1.88E-02
52	GO:0004722: protein serine/threonine phosphatase activity	1.88E-02
53	GO:0042393: histone binding	2.00E-02
54	GO:0043621: protein self-association	2.31E-02
55	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.70E-02
56	GO:0003729: mRNA binding	3.16E-02
57	GO:0022857: transmembrane transporter activity	3.32E-02
58	GO:0019843: rRNA binding	4.07E-02
59	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.15E-02
60	GO:0003735: structural constituent of ribosome	4.52E-02
61	GO:0005515: protein binding	4.65E-02
62	GO:0046872: metal ion binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0000502: proteasome complex	2.12E-21
3	GO:0005839: proteasome core complex	2.15E-18
4	GO:0019773: proteasome core complex, alpha-subunit complex	3.96E-09
5	GO:0005829: cytosol	1.52E-06
6	GO:0046930: pore complex	7.06E-05
7	GO:0008541: proteasome regulatory particle, lid subcomplex	1.48E-04
8	GO:0005794: Golgi apparatus	1.71E-04
9	GO:0005697: telomerase holoenzyme complex	2.32E-04
10	GO:0022626: cytosolic ribosome	2.70E-04
11	GO:0005741: mitochondrial outer membrane	3.84E-04
12	GO:0046861: glyoxysomal membrane	3.86E-04
13	GO:0005774: vacuolar membrane	7.50E-04
14	GO:0005783: endoplasmic reticulum	1.11E-03
15	GO:0005771: multivesicular body	1.14E-03
16	GO:0030904: retromer complex	1.14E-03
17	GO:0031595: nuclear proteasome complex	1.59E-03
18	GO:0005742: mitochondrial outer membrane translocase complex	2.10E-03
19	GO:0009514: glyoxysome	2.10E-03
20	GO:0005685: U1 snRNP	2.37E-03
21	GO:0008180: COP9 signalosome	2.37E-03
22	GO:0031090: organelle membrane	2.37E-03
23	GO:0005665: DNA-directed RNA polymerase II, core complex	3.57E-03
24	GO:0005681: spliceosomal complex	3.59E-03
25	GO:0009508: plastid chromosome	3.89E-03
26	GO:0005732: small nucleolar ribonucleoprotein complex	4.70E-03
27	GO:0000419: DNA-directed RNA polymerase V complex	4.92E-03
28	GO:0005769: early endosome	4.92E-03
29	GO:0005634: nucleus	4.97E-03
30	GO:0005758: mitochondrial intermembrane space	5.28E-03
31	GO:0005737: cytoplasm	5.53E-03
32	GO:0032580: Golgi cisterna membrane	1.13E-02
33	GO:0009295: nucleoid	1.18E-02
34	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.26E-02
35	GO:0015934: large ribosomal subunit	1.71E-02
36	GO:0005773: vacuole	1.89E-02
37	GO:0005819: spindle	1.94E-02
38	GO:0005743: mitochondrial inner membrane	1.97E-02
39	GO:0031902: late endosome membrane	2.06E-02
40	GO:0090406: pollen tube	2.18E-02
41	GO:0005789: endoplasmic reticulum membrane	3.27E-02
42	GO:0009524: phragmoplast	4.22E-02