co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G26530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000025: maltose catabolic process	0.00E+00
2	GO:0007172: signal complex assembly	0.00E+00
3	GO:0090627: plant epidermal cell differentiation	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:1905177: tracheary element differentiation	0.00E+00
6	GO:0071474: cellular hyperosmotic response	0.00E+00
7	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
8	GO:0030155: regulation of cell adhesion	0.00E+00
9	GO:0015979: photosynthesis	1.52E-06
10	GO:0009773: photosynthetic electron transport in photosystem I	6.94E-06
11	GO:0005983: starch catabolic process	8.86E-06
12	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.63E-06
13	GO:0006461: protein complex assembly	2.93E-05
14	GO:0005980: glycogen catabolic process	1.50E-04
15	GO:0032958: inositol phosphate biosynthetic process	1.50E-04
16	GO:0080093: regulation of photorespiration	1.50E-04
17	GO:0031998: regulation of fatty acid beta-oxidation	1.50E-04
18	GO:0010028: xanthophyll cycle	1.50E-04
19	GO:0000023: maltose metabolic process	1.50E-04
20	GO:0005976: polysaccharide metabolic process	3.42E-04
21	GO:0031648: protein destabilization	3.42E-04
22	GO:0016122: xanthophyll metabolic process	3.42E-04
23	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.42E-04
24	GO:0051262: protein tetramerization	3.42E-04
25	GO:0009266: response to temperature stimulus	4.00E-04
26	GO:0006000: fructose metabolic process	5.61E-04
27	GO:0010623: programmed cell death involved in cell development	5.61E-04
28	GO:0080055: low-affinity nitrate transport	5.61E-04
29	GO:0016050: vesicle organization	5.61E-04
30	GO:0048281: inflorescence morphogenesis	5.61E-04
31	GO:0009768: photosynthesis, light harvesting in photosystem I	6.09E-04
32	GO:0009735: response to cytokinin	7.08E-04
33	GO:0010017: red or far-red light signaling pathway	7.29E-04
34	GO:0030100: regulation of endocytosis	8.03E-04
35	GO:0010148: transpiration	8.03E-04
36	GO:0010731: protein glutathionylation	8.03E-04
37	GO:1902358: sulfate transmembrane transport	8.03E-04
38	GO:0006020: inositol metabolic process	8.03E-04
39	GO:1901000: regulation of response to salt stress	8.03E-04
40	GO:0015994: chlorophyll metabolic process	1.06E-03
41	GO:0010600: regulation of auxin biosynthetic process	1.06E-03
42	GO:0010508: positive regulation of autophagy	1.06E-03
43	GO:2000122: negative regulation of stomatal complex development	1.06E-03
44	GO:0010021: amylopectin biosynthetic process	1.06E-03
45	GO:0010037: response to carbon dioxide	1.06E-03
46	GO:0006808: regulation of nitrogen utilization	1.06E-03
47	GO:0015976: carbon utilization	1.06E-03
48	GO:0010023: proanthocyanidin biosynthetic process	1.06E-03
49	GO:0009765: photosynthesis, light harvesting	1.06E-03
50	GO:0009409: response to cold	1.30E-03
51	GO:0006097: glyoxylate cycle	1.35E-03
52	GO:0035434: copper ion transmembrane transport	1.35E-03
53	GO:0009913: epidermal cell differentiation	1.65E-03
54	GO:0000470: maturation of LSU-rRNA	1.65E-03
55	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.98E-03
56	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.98E-03
57	GO:0009955: adaxial/abaxial pattern specification	1.98E-03
58	GO:0071470: cellular response to osmotic stress	1.98E-03
59	GO:0008272: sulfate transport	2.33E-03
60	GO:0009769: photosynthesis, light harvesting in photosystem II	2.33E-03
61	GO:0070370: cellular heat acclimation	2.33E-03
62	GO:0009645: response to low light intensity stimulus	2.33E-03
63	GO:0010103: stomatal complex morphogenesis	2.33E-03
64	GO:0010161: red light signaling pathway	2.33E-03
65	GO:0009817: defense response to fungus, incompatible interaction	2.45E-03
66	GO:0018298: protein-chromophore linkage	2.45E-03
67	GO:0010928: regulation of auxin mediated signaling pathway	2.70E-03
68	GO:0005978: glycogen biosynthetic process	2.70E-03
69	GO:0006353: DNA-templated transcription, termination	2.70E-03
70	GO:0030091: protein repair	2.70E-03
71	GO:0009704: de-etiolation	2.70E-03
72	GO:0009631: cold acclimation	2.82E-03
73	GO:0055114: oxidation-reduction process	2.83E-03
74	GO:0009657: plastid organization	3.08E-03
75	GO:0001558: regulation of cell growth	3.08E-03
76	GO:0006002: fructose 6-phosphate metabolic process	3.08E-03
77	GO:0051865: protein autoubiquitination	3.49E-03
78	GO:0006783: heme biosynthetic process	3.49E-03
79	GO:0042761: very long-chain fatty acid biosynthetic process	3.91E-03
80	GO:0005982: starch metabolic process	3.91E-03
81	GO:0009644: response to high light intensity	4.30E-03
82	GO:0006782: protoporphyrinogen IX biosynthetic process	4.35E-03
83	GO:0009750: response to fructose	4.80E-03
84	GO:0010015: root morphogenesis	4.80E-03
85	GO:0006810: transport	5.56E-03
86	GO:0010102: lateral root morphogenesis	5.75E-03
87	GO:0006108: malate metabolic process	5.75E-03
88	GO:0006006: glucose metabolic process	5.75E-03
89	GO:0009718: anthocyanin-containing compound biosynthetic process	5.75E-03
90	GO:0006094: gluconeogenesis	5.75E-03
91	GO:0005986: sucrose biosynthetic process	5.75E-03
92	GO:0009934: regulation of meristem structural organization	6.25E-03
93	GO:0010025: wax biosynthetic process	7.30E-03
94	GO:0009944: polarity specification of adaxial/abaxial axis	7.84E-03
95	GO:0006289: nucleotide-excision repair	7.84E-03
96	GO:0007017: microtubule-based process	8.40E-03
97	GO:0006825: copper ion transport	8.40E-03
98	GO:0051302: regulation of cell division	8.40E-03
99	GO:0061077: chaperone-mediated protein folding	8.97E-03
100	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.56E-03
101	GO:0030245: cellulose catabolic process	9.56E-03
102	GO:0009686: gibberellin biosynthetic process	1.02E-02
103	GO:0001944: vasculature development	1.02E-02
104	GO:0009414: response to water deprivation	1.05E-02
105	GO:0006284: base-excision repair	1.08E-02
106	GO:0010089: xylem development	1.08E-02
107	GO:0006979: response to oxidative stress	1.10E-02
108	GO:0042335: cuticle development	1.20E-02
109	GO:0048825: cotyledon development	1.41E-02
110	GO:0019252: starch biosynthetic process	1.41E-02
111	GO:0000302: response to reactive oxygen species	1.47E-02
112	GO:0048235: pollen sperm cell differentiation	1.55E-02
113	GO:1901657: glycosyl compound metabolic process	1.62E-02
114	GO:0006310: DNA recombination	1.69E-02
115	GO:0010027: thylakoid membrane organization	1.92E-02
116	GO:0016126: sterol biosynthetic process	1.92E-02
117	GO:0009607: response to biotic stimulus	1.99E-02
118	GO:0009627: systemic acquired resistance	2.07E-02
119	GO:0046686: response to cadmium ion	2.12E-02
120	GO:0015995: chlorophyll biosynthetic process	2.15E-02
121	GO:0006970: response to osmotic stress	2.20E-02
122	GO:0016311: dephosphorylation	2.23E-02
123	GO:0000160: phosphorelay signal transduction system	2.40E-02
124	GO:0010218: response to far red light	2.48E-02
125	GO:0080167: response to karrikin	2.54E-02
126	GO:0010119: regulation of stomatal movement	2.56E-02
127	GO:0009637: response to blue light	2.74E-02
128	GO:0034599: cellular response to oxidative stress	2.83E-02
129	GO:0006099: tricarboxylic acid cycle	2.83E-02
130	GO:0045454: cell redox homeostasis	3.04E-02
131	GO:0006631: fatty acid metabolic process	3.09E-02
132	GO:0008283: cell proliferation	3.28E-02
133	GO:0010114: response to red light	3.28E-02
134	GO:0006869: lipid transport	3.33E-02
135	GO:0009636: response to toxic substance	3.56E-02
136	GO:0009965: leaf morphogenesis	3.56E-02
137	GO:0006855: drug transmembrane transport	3.66E-02
138	GO:0006281: DNA repair	3.74E-02
139	GO:0009664: plant-type cell wall organization	3.85E-02
140	GO:0009585: red, far-red light phototransduction	4.05E-02
141	GO:0006857: oligopeptide transport	4.26E-02
142	GO:0009740: gibberellic acid mediated signaling pathway	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
3	GO:0009899: ent-kaurene synthase activity	0.00E+00
4	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
5	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.80E-05
6	GO:0048038: quinone binding	9.94E-05
7	GO:0008184: glycogen phosphorylase activity	1.50E-04
8	GO:0000828: inositol hexakisphosphate kinase activity	1.50E-04
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.50E-04
10	GO:0004853: uroporphyrinogen decarboxylase activity	1.50E-04
11	GO:0004645: phosphorylase activity	1.50E-04
12	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	1.50E-04
13	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.50E-04
14	GO:0000829: inositol heptakisphosphate kinase activity	1.50E-04
15	GO:0005227: calcium activated cation channel activity	1.50E-04
16	GO:0050736: O-malonyltransferase activity	3.42E-04
17	GO:0018708: thiol S-methyltransferase activity	3.42E-04
18	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.42E-04
19	GO:0010297: heteropolysaccharide binding	3.42E-04
20	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.42E-04
21	GO:0031409: pigment binding	4.99E-04
22	GO:0043169: cation binding	5.61E-04
23	GO:0017150: tRNA dihydrouridine synthase activity	5.61E-04
24	GO:0017108: 5'-flap endonuclease activity	5.61E-04
25	GO:0045174: glutathione dehydrogenase (ascorbate) activity	5.61E-04
26	GO:0080054: low-affinity nitrate transmembrane transporter activity	5.61E-04
27	GO:0004506: squalene monooxygenase activity	1.06E-03
28	GO:0019199: transmembrane receptor protein kinase activity	1.06E-03
29	GO:0042277: peptide binding	1.06E-03
30	GO:0019104: DNA N-glycosylase activity	1.06E-03
31	GO:0004130: cytochrome-c peroxidase activity	1.65E-03
32	GO:0016615: malate dehydrogenase activity	1.65E-03
33	GO:2001070: starch binding	1.65E-03
34	GO:0009055: electron carrier activity	1.74E-03
35	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.98E-03
36	GO:0030060: L-malate dehydrogenase activity	1.98E-03
37	GO:0005261: cation channel activity	1.98E-03
38	GO:0004602: glutathione peroxidase activity	1.98E-03
39	GO:0016168: chlorophyll binding	1.99E-03
40	GO:0004033: aldo-keto reductase (NADP) activity	2.70E-03
41	GO:0008271: secondary active sulfate transmembrane transporter activity	3.08E-03
42	GO:0005375: copper ion transmembrane transporter activity	3.08E-03
43	GO:0043621: protein self-association	4.30E-03
44	GO:0044183: protein binding involved in protein folding	4.80E-03
45	GO:0047372: acylglycerol lipase activity	4.80E-03
46	GO:0015116: sulfate transmembrane transporter activity	5.27E-03
47	GO:0004565: beta-galactosidase activity	5.75E-03
48	GO:0004022: alcohol dehydrogenase (NAD) activity	5.75E-03
49	GO:0004089: carbonate dehydratase activity	5.75E-03
50	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.30E-03
51	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.30E-03
52	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.30E-03
53	GO:0015035: protein disulfide oxidoreductase activity	7.84E-03
54	GO:0033612: receptor serine/threonine kinase binding	8.97E-03
55	GO:0019843: rRNA binding	9.54E-03
56	GO:0008810: cellulase activity	1.02E-02
57	GO:0008289: lipid binding	1.20E-02
58	GO:0003713: transcription coactivator activity	1.27E-02
59	GO:0004518: nuclease activity	1.55E-02
60	GO:0000156: phosphorelay response regulator activity	1.62E-02
61	GO:0003684: damaged DNA binding	1.69E-02
62	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.76E-02
63	GO:0005200: structural constituent of cytoskeleton	1.76E-02
64	GO:0102483: scopolin beta-glucosidase activity	2.15E-02
65	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.31E-02
66	GO:0050660: flavin adenine dinucleotide binding	2.37E-02
67	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.74E-02
68	GO:0008422: beta-glucosidase activity	2.91E-02
69	GO:0004364: glutathione transferase activity	3.19E-02
70	GO:0051537: 2 iron, 2 sulfur cluster binding	3.47E-02
71	GO:0015293: symporter activity	3.56E-02
72	GO:0003924: GTPase activity	3.74E-02
73	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0042579: microbody	0.00E+00
3	GO:0009535: chloroplast thylakoid membrane	1.53E-17
4	GO:0009507: chloroplast	2.84E-12
5	GO:0009534: chloroplast thylakoid	5.94E-12
6	GO:0009941: chloroplast envelope	2.63E-10
7	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.37E-08
8	GO:0009579: thylakoid	4.21E-06
9	GO:0009570: chloroplast stroma	6.74E-06
10	GO:0010287: plastoglobule	1.35E-05
11	GO:0030095: chloroplast photosystem II	1.37E-05
12	GO:0009523: photosystem II	8.98E-05
13	GO:0009501: amyloplast	1.06E-04
14	GO:0009543: chloroplast thylakoid lumen	1.88E-04
15	GO:0030093: chloroplast photosystem I	3.42E-04
16	GO:0009508: plastid chromosome	3.54E-04
17	GO:0031977: thylakoid lumen	4.23E-04
18	GO:0030076: light-harvesting complex	4.48E-04
19	GO:0042651: thylakoid membrane	6.09E-04
20	GO:0009522: photosystem I	1.15E-03
21	GO:0005798: Golgi-associated vesicle	1.65E-03
22	GO:0009295: nucleoid	1.68E-03
23	GO:0009533: chloroplast stromal thylakoid	2.33E-03
24	GO:0009538: photosystem I reaction center	2.70E-03
25	GO:0045298: tubulin complex	3.49E-03
26	GO:0016020: membrane	3.79E-03
27	GO:0005769: early endosome	7.30E-03
28	GO:0009706: chloroplast inner membrane	7.61E-03
29	GO:0009654: photosystem II oxygen evolving complex	8.40E-03
30	GO:0019898: extrinsic component of membrane	1.41E-02
31	GO:0010319: stromule	1.76E-02
32	GO:0000325: plant-type vacuole	2.56E-02
33	GO:0015934: large ribosomal subunit	2.56E-02
34	GO:0048046: apoplast	2.64E-02
35	GO:0031966: mitochondrial membrane	3.85E-02
36	GO:0005834: heterotrimeric G-protein complex	4.78E-02