GO Enrichment Analysis of Co-expressed Genes with
AT4G26430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:0006412: translation | 2.37E-15 |
| 3 | GO:0000398: mRNA splicing, via spliceosome | 2.79E-07 |
| 4 | GO:0000027: ribosomal large subunit assembly | 2.01E-06 |
| 5 | GO:0042254: ribosome biogenesis | 2.72E-06 |
| 6 | GO:0000028: ribosomal small subunit assembly | 1.93E-05 |
| 7 | GO:0000387: spliceosomal snRNP assembly | 3.83E-05 |
| 8 | GO:2001006: regulation of cellulose biosynthetic process | 5.03E-05 |
| 9 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.23E-04 |
| 10 | GO:0071668: plant-type cell wall assembly | 1.23E-04 |
| 11 | GO:0006420: arginyl-tRNA aminoacylation | 1.23E-04 |
| 12 | GO:0010198: synergid death | 1.23E-04 |
| 13 | GO:0070919: production of siRNA involved in chromatin silencing by small RNA | 2.11E-04 |
| 14 | GO:1904278: positive regulation of wax biosynthetic process | 2.11E-04 |
| 15 | GO:1902626: assembly of large subunit precursor of preribosome | 2.11E-04 |
| 16 | GO:0060145: viral gene silencing in virus induced gene silencing | 2.11E-04 |
| 17 | GO:0045039: protein import into mitochondrial inner membrane | 2.11E-04 |
| 18 | GO:0010452: histone H3-K36 methylation | 2.11E-04 |
| 19 | GO:0046168: glycerol-3-phosphate catabolic process | 2.11E-04 |
| 20 | GO:0000413: protein peptidyl-prolyl isomerization | 2.41E-04 |
| 21 | GO:0006165: nucleoside diphosphate phosphorylation | 3.09E-04 |
| 22 | GO:0006228: UTP biosynthetic process | 3.09E-04 |
| 23 | GO:0009558: embryo sac cellularization | 3.09E-04 |
| 24 | GO:0070301: cellular response to hydrogen peroxide | 3.09E-04 |
| 25 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.09E-04 |
| 26 | GO:0006241: CTP biosynthetic process | 3.09E-04 |
| 27 | GO:0006072: glycerol-3-phosphate metabolic process | 3.09E-04 |
| 28 | GO:0051205: protein insertion into membrane | 4.15E-04 |
| 29 | GO:0009165: nucleotide biosynthetic process | 4.15E-04 |
| 30 | GO:0009755: hormone-mediated signaling pathway | 4.15E-04 |
| 31 | GO:0006183: GTP biosynthetic process | 4.15E-04 |
| 32 | GO:0006457: protein folding | 5.97E-04 |
| 33 | GO:0051568: histone H3-K4 methylation | 6.44E-04 |
| 34 | GO:0043248: proteasome assembly | 6.44E-04 |
| 35 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 8.97E-04 |
| 36 | GO:0050821: protein stabilization | 1.03E-03 |
| 37 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.17E-03 |
| 38 | GO:0009808: lignin metabolic process | 1.17E-03 |
| 39 | GO:0048589: developmental growth | 1.32E-03 |
| 40 | GO:0009245: lipid A biosynthetic process | 1.32E-03 |
| 41 | GO:0010267: production of ta-siRNAs involved in RNA interference | 1.47E-03 |
| 42 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 1.63E-03 |
| 43 | GO:0016441: posttranscriptional gene silencing | 1.63E-03 |
| 44 | GO:0010102: lateral root morphogenesis | 2.14E-03 |
| 45 | GO:0006626: protein targeting to mitochondrion | 2.14E-03 |
| 46 | GO:0048467: gynoecium development | 2.32E-03 |
| 47 | GO:0034976: response to endoplasmic reticulum stress | 2.69E-03 |
| 48 | GO:0006406: mRNA export from nucleus | 2.88E-03 |
| 49 | GO:0006289: nucleotide-excision repair | 2.88E-03 |
| 50 | GO:0009116: nucleoside metabolic process | 2.88E-03 |
| 51 | GO:0016226: iron-sulfur cluster assembly | 3.50E-03 |
| 52 | GO:0007005: mitochondrion organization | 3.50E-03 |
| 53 | GO:0010154: fruit development | 4.60E-03 |
| 54 | GO:0010197: polar nucleus fusion | 4.60E-03 |
| 55 | GO:0010182: sugar mediated signaling pathway | 4.60E-03 |
| 56 | GO:0048825: cotyledon development | 5.07E-03 |
| 57 | GO:0009749: response to glucose | 5.07E-03 |
| 58 | GO:0051607: defense response to virus | 6.59E-03 |
| 59 | GO:0009627: systemic acquired resistance | 7.40E-03 |
| 60 | GO:0015031: protein transport | 8.38E-03 |
| 61 | GO:0009910: negative regulation of flower development | 9.12E-03 |
| 62 | GO:0000724: double-strand break repair via homologous recombination | 9.42E-03 |
| 63 | GO:0045087: innate immune response | 9.73E-03 |
| 64 | GO:0008283: cell proliferation | 1.16E-02 |
| 65 | GO:0009965: leaf morphogenesis | 1.26E-02 |
| 66 | GO:0009908: flower development | 1.39E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 1.79E-02 |
| 68 | GO:0009553: embryo sac development | 1.80E-02 |
| 69 | GO:0006414: translational elongation | 2.30E-02 |
| 70 | GO:0006633: fatty acid biosynthetic process | 2.54E-02 |
| 71 | GO:0009651: response to salt stress | 2.86E-02 |
| 72 | GO:0048366: leaf development | 4.17E-02 |
| 73 | GO:0046686: response to cadmium ion | 4.83E-02 |
| 74 | GO:0045454: cell redox homeostasis | 4.91E-02 |
| 75 | GO:0045892: negative regulation of transcription, DNA-templated | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 2.75E-20 |
| 2 | GO:0035614: snRNA stem-loop binding | 5.03E-05 |
| 3 | GO:0003729: mRNA binding | 6.41E-05 |
| 4 | GO:0004826: phenylalanine-tRNA ligase activity | 1.23E-04 |
| 5 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 1.23E-04 |
| 6 | GO:0030619: U1 snRNA binding | 1.23E-04 |
| 7 | GO:0004814: arginine-tRNA ligase activity | 1.23E-04 |
| 8 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 2.11E-04 |
| 9 | GO:0004550: nucleoside diphosphate kinase activity | 3.09E-04 |
| 10 | GO:0008097: 5S rRNA binding | 3.09E-04 |
| 11 | GO:0004749: ribose phosphate diphosphokinase activity | 3.09E-04 |
| 12 | GO:0031177: phosphopantetheine binding | 6.44E-04 |
| 13 | GO:0000035: acyl binding | 7.68E-04 |
| 14 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.03E-03 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.11E-03 |
| 16 | GO:0000049: tRNA binding | 1.96E-03 |
| 17 | GO:0003725: double-stranded RNA binding | 2.14E-03 |
| 18 | GO:0031072: heat shock protein binding | 2.14E-03 |
| 19 | GO:0000166: nucleotide binding | 2.53E-03 |
| 20 | GO:0003756: protein disulfide isomerase activity | 3.93E-03 |
| 21 | GO:0008237: metallopeptidase activity | 6.33E-03 |
| 22 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.24E-03 |
| 23 | GO:0050897: cobalt ion binding | 9.12E-03 |
| 24 | GO:0003746: translation elongation factor activity | 9.73E-03 |
| 25 | GO:0051287: NAD binding | 1.33E-02 |
| 26 | GO:0051082: unfolded protein binding | 1.84E-02 |
| 27 | GO:0019843: rRNA binding | 2.16E-02 |
| 28 | GO:0003723: RNA binding | 2.58E-02 |
| 29 | GO:0008168: methyltransferase activity | 3.61E-02 |
| 30 | GO:0046872: metal ion binding | 4.22E-02 |
| 31 | GO:0008233: peptidase activity | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097361: CIA complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 4 | GO:0022626: cytosolic ribosome | 3.42E-15 |
| 5 | GO:0005840: ribosome | 1.23E-14 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 3.38E-12 |
| 7 | GO:0005829: cytosol | 4.64E-10 |
| 8 | GO:0005730: nucleolus | 2.85E-09 |
| 9 | GO:0022627: cytosolic small ribosomal subunit | 5.21E-08 |
| 10 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.40E-07 |
| 11 | GO:0071011: precatalytic spliceosome | 2.97E-07 |
| 12 | GO:0071013: catalytic step 2 spliceosome | 5.30E-07 |
| 13 | GO:0005737: cytoplasm | 2.72E-05 |
| 14 | GO:0009506: plasmodesma | 2.85E-05 |
| 15 | GO:0005685: U1 snRNP | 3.12E-05 |
| 16 | GO:0005662: DNA replication factor A complex | 5.03E-05 |
| 17 | GO:0019013: viral nucleocapsid | 7.50E-05 |
| 18 | GO:0034719: SMN-Sm protein complex | 2.11E-04 |
| 19 | GO:0005853: eukaryotic translation elongation factor 1 complex | 2.11E-04 |
| 20 | GO:0000439: core TFIIH complex | 2.11E-04 |
| 21 | GO:1990726: Lsm1-7-Pat1 complex | 3.09E-04 |
| 22 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 3.09E-04 |
| 23 | GO:0005682: U5 snRNP | 4.15E-04 |
| 24 | GO:0016593: Cdc73/Paf1 complex | 4.15E-04 |
| 25 | GO:0005687: U4 snRNP | 5.26E-04 |
| 26 | GO:0097526: spliceosomal tri-snRNP complex | 5.26E-04 |
| 27 | GO:0000974: Prp19 complex | 6.44E-04 |
| 28 | GO:0005801: cis-Golgi network | 7.68E-04 |
| 29 | GO:0005689: U12-type spliceosomal complex | 7.68E-04 |
| 30 | GO:0071004: U2-type prespliceosome | 1.03E-03 |
| 31 | GO:0005688: U6 snRNP | 1.03E-03 |
| 32 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.17E-03 |
| 33 | GO:0000502: proteasome complex | 1.28E-03 |
| 34 | GO:0005681: spliceosomal complex | 1.50E-03 |
| 35 | GO:0005834: heterotrimeric G-protein complex | 1.59E-03 |
| 36 | GO:0005686: U2 snRNP | 1.63E-03 |
| 37 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.79E-03 |
| 38 | GO:0005758: mitochondrial intermembrane space | 2.88E-03 |
| 39 | GO:0070469: respiratory chain | 3.08E-03 |
| 40 | GO:0015935: small ribosomal subunit | 3.29E-03 |
| 41 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.18E-03 |
| 42 | GO:0000932: P-body | 6.85E-03 |
| 43 | GO:0005774: vacuolar membrane | 7.63E-03 |
| 44 | GO:0005743: mitochondrial inner membrane | 8.03E-03 |
| 45 | GO:0015934: large ribosomal subunit | 9.12E-03 |
| 46 | GO:0005802: trans-Golgi network | 2.47E-02 |
| 47 | GO:0005759: mitochondrial matrix | 2.54E-02 |
| 48 | GO:0005768: endosome | 2.81E-02 |
| 49 | GO:0016020: membrane | 3.62E-02 |
| 50 | GO:0005886: plasma membrane | 4.37E-02 |