Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006511: ubiquitin-dependent protein catabolic process9.16E-08
2GO:0000413: protein peptidyl-prolyl isomerization1.19E-05
3GO:0015786: UDP-glucose transport1.65E-05
4GO:0051788: response to misfolded protein1.65E-05
5GO:0030163: protein catabolic process2.01E-05
6GO:0015783: GDP-fucose transport3.04E-05
7GO:0009647: skotomorphogenesis4.72E-05
8GO:0072334: UDP-galactose transmembrane transport4.72E-05
9GO:0010971: positive regulation of G2/M transition of mitotic cell cycle4.72E-05
10GO:0010387: COP9 signalosome assembly6.61E-05
11GO:0051603: proteolysis involved in cellular protein catabolic process9.56E-05
12GO:0043248: proteasome assembly1.10E-04
13GO:0006457: protein folding1.14E-04
14GO:0048528: post-embryonic root development1.60E-04
15GO:0000338: protein deneddylation1.60E-04
16GO:0031540: regulation of anthocyanin biosynthetic process1.86E-04
17GO:0010100: negative regulation of photomorphogenesis2.14E-04
18GO:0010093: specification of floral organ identity2.14E-04
19GO:0046685: response to arsenic-containing substance2.43E-04
20GO:0034976: response to endoplasmic reticulum stress4.98E-04
21GO:0061077: chaperone-mediated protein folding6.04E-04
22GO:0019722: calcium-mediated signaling7.14E-04
23GO:0048825: cotyledon development9.08E-04
24GO:0010043: response to zinc ion1.57E-03
25GO:0009640: photomorphogenesis1.98E-03
26GO:0031347: regulation of defense response2.25E-03
27GO:0009736: cytokinin-activated signaling pathway2.41E-03
28GO:0009585: red, far-red light phototransduction2.41E-03
29GO:0009733: response to auxin2.56E-03
30GO:0009742: brassinosteroid mediated signaling pathway3.18E-03
31GO:0046686: response to cadmium ion3.54E-03
32GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.79E-03
33GO:0048366: leaf development6.70E-03
34GO:0045454: cell redox homeostasis7.87E-03
35GO:0009408: response to heat9.11E-03
36GO:0048364: root development9.38E-03
37GO:0009908: flower development1.27E-02
38GO:0009735: response to cytokinin1.28E-02
39GO:0006979: response to oxidative stress2.27E-02
40GO:0007165: signal transduction3.81E-02
41GO:0009737: response to abscisic acid3.87E-02
RankGO TermAdjusted P value
1GO:0004298: threonine-type endopeptidase activity5.17E-11
2GO:0008233: peptidase activity2.75E-09
3GO:0003755: peptidyl-prolyl cis-trans isomerase activity9.35E-07
4GO:0005457: GDP-fucose transmembrane transporter activity3.04E-05
5GO:0005460: UDP-glucose transmembrane transporter activity4.72E-05
6GO:0005459: UDP-galactose transmembrane transporter activity8.72E-05
7GO:0045309: protein phosphorylated amino acid binding2.72E-04
8GO:0019904: protein domain specific binding3.33E-04
9GO:0005528: FK506 binding5.33E-04
10GO:0003756: protein disulfide isomerase activity7.14E-04
11GO:0008514: organic anion transmembrane transporter activity7.14E-04
12GO:0016853: isomerase activity8.70E-04
13GO:0008237: metallopeptidase activity1.12E-03
14GO:0005509: calcium ion binding2.13E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex1.40E-13
2GO:0005839: proteasome core complex5.17E-11
3GO:0019773: proteasome core complex, alpha-subunit complex8.53E-07
4GO:0005788: endoplasmic reticulum lumen2.88E-05
5GO:0005829: cytosol7.23E-05
6GO:0008180: COP9 signalosome2.43E-04
7GO:0008541: proteasome regulatory particle, lid subcomplex3.33E-04
8GO:0005783: endoplasmic reticulum3.65E-04
9GO:0022626: cytosolic ribosome1.11E-03
10GO:0009506: plasmodesma5.60E-03
11GO:0005774: vacuolar membrane7.83E-03
12GO:0005737: cytoplasm1.67E-02
13GO:0005622: intracellular2.05E-02
14GO:0005794: Golgi apparatus4.08E-02
15GO:0009507: chloroplast4.51E-02
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Gene type



Gene DE type