Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25450

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0017038: protein import0.00E+00
2GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
3GO:0006636: unsaturated fatty acid biosynthetic process7.61E-07
4GO:0016117: carotenoid biosynthetic process1.81E-06
5GO:0043609: regulation of carbon utilization1.91E-06
6GO:0034337: RNA folding1.91E-06
7GO:0006000: fructose metabolic process1.02E-05
8GO:0010109: regulation of photosynthesis2.32E-05
9GO:0016123: xanthophyll biosynthetic process3.12E-05
10GO:0016120: carotene biosynthetic process3.12E-05
11GO:0006633: fatty acid biosynthetic process4.78E-05
12GO:1901259: chloroplast rRNA processing4.94E-05
13GO:0010196: nonphotochemical quenching5.95E-05
14GO:0006605: protein targeting7.04E-05
15GO:0006002: fructose 6-phosphate metabolic process8.18E-05
16GO:0010205: photoinhibition1.06E-04
17GO:0009646: response to absence of light3.66E-04
18GO:0010090: trichome morphogenesis4.37E-04
19GO:0006499: N-terminal protein myristoylation6.47E-04
20GO:0009631: cold acclimation6.66E-04
21GO:0009658: chloroplast organization2.42E-03
22GO:0055114: oxidation-reduction process2.60E-03
23GO:0045454: cell redox homeostasis3.16E-03
24GO:0006886: intracellular protein transport3.23E-03
25GO:0008152: metabolic process3.89E-03
26GO:0009793: embryo development ending in seed dormancy1.59E-02
27GO:0006412: translation2.85E-02
RankGO TermAdjusted P value
1GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
2GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
3GO:0016166: phytoene dehydrogenase activity0.00E+00
4GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity1.91E-06
5GO:0045485: omega-6 fatty acid desaturase activity1.91E-06
6GO:0010291: carotene beta-ring hydroxylase activity5.40E-06
7GO:0004312: fatty acid synthase activity5.40E-06
8GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.02E-05
9GO:0015462: ATPase-coupled protein transmembrane transporter activity1.02E-05
10GO:0004040: amidase activity3.12E-05
11GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.77E-05
12GO:2001070: starch binding3.99E-05
13GO:0003746: translation elongation factor activity7.07E-04
14GO:0019843: rRNA binding1.46E-03
15GO:0019825: oxygen binding6.89E-03
16GO:0005525: GTP binding7.62E-03
17GO:0005506: iron ion binding8.71E-03
18GO:0005524: ATP binding9.35E-03
19GO:0016491: oxidoreductase activity1.07E-02
20GO:0003729: mRNA binding1.17E-02
21GO:0020037: heme binding1.22E-02
22GO:0016787: hydrolase activity1.51E-02
23GO:0003723: RNA binding3.81E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast5.22E-08
2GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex1.91E-06
3GO:0009509: chromoplast1.02E-05
4GO:0009941: chloroplast envelope1.10E-05
5GO:0009570: chloroplast stroma2.17E-05
6GO:0032040: small-subunit processome1.46E-04
7GO:0042651: thylakoid membrane2.34E-04
8GO:0009534: chloroplast thylakoid3.69E-04
9GO:0009706: chloroplast inner membrane1.26E-03
10GO:0031969: chloroplast membrane2.80E-03
11GO:0005840: ribosome9.10E-03
12GO:0009536: plastid1.02E-02
13GO:0005730: nucleolus1.28E-02
14GO:0009535: chloroplast thylakoid membrane1.56E-02
15GO:0005886: plasma membrane4.36E-02
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Gene type



Gene DE type