co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G25260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:0006203: dGTP catabolic process	0.00E+00
3	GO:0009873: ethylene-activated signaling pathway	4.54E-05
4	GO:0018107: peptidyl-threonine phosphorylation	2.89E-04
5	GO:0010507: negative regulation of autophagy	2.99E-04
6	GO:0031407: oxylipin metabolic process	2.99E-04
7	GO:0006898: receptor-mediated endocytosis	2.99E-04
8	GO:0015786: UDP-glucose transport	2.99E-04
9	GO:0015783: GDP-fucose transport	4.92E-04
10	GO:0046786: viral replication complex formation and maintenance	4.92E-04
11	GO:0044210: 'de novo' CTP biosynthetic process	4.92E-04
12	GO:0016045: detection of bacterium	4.92E-04
13	GO:0010359: regulation of anion channel activity	4.92E-04
14	GO:0010371: regulation of gibberellin biosynthetic process	7.04E-04
15	GO:0072334: UDP-galactose transmembrane transport	7.04E-04
16	GO:0070417: cellular response to cold	7.67E-04
17	GO:0042631: cellular response to water deprivation	8.26E-04
18	GO:0046345: abscisic acid catabolic process	9.34E-04
19	GO:0015689: molybdate ion transport	9.34E-04
20	GO:0046355: mannan catabolic process	9.34E-04
21	GO:0022622: root system development	9.34E-04
22	GO:0006873: cellular ion homeostasis	1.18E-03
23	GO:0048497: maintenance of floral organ identity	1.18E-03
24	GO:0032957: inositol trisphosphate metabolic process	1.18E-03
25	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.18E-03
26	GO:0048359: mucilage metabolic process involved in seed coat development	1.18E-03
27	GO:0009823: cytokinin catabolic process	1.18E-03
28	GO:0006656: phosphatidylcholine biosynthetic process	1.18E-03
29	GO:0019760: glucosinolate metabolic process	1.30E-03
30	GO:1900425: negative regulation of defense response to bacterium	1.45E-03
31	GO:0045490: pectin catabolic process	1.63E-03
32	GO:0009414: response to water deprivation	1.90E-03
33	GO:0010103: stomatal complex morphogenesis	2.04E-03
34	GO:0032880: regulation of protein localization	2.04E-03
35	GO:0009631: cold acclimation	2.32E-03
36	GO:0035265: organ growth	2.36E-03
37	GO:0009690: cytokinin metabolic process	2.36E-03
38	GO:0015780: nucleotide-sugar transport	3.04E-03
39	GO:0042538: hyperosmotic salinity response	4.08E-03
40	GO:0052544: defense response by callose deposition in cell wall	4.18E-03
41	GO:0045037: protein import into chloroplast stroma	4.58E-03
42	GO:0006351: transcription, DNA-templated	4.62E-03
43	GO:0050826: response to freezing	5.00E-03
44	GO:2000012: regulation of auxin polar transport	5.00E-03
45	GO:0030048: actin filament-based movement	5.00E-03
46	GO:0070588: calcium ion transmembrane transport	5.88E-03
47	GO:0009825: multidimensional cell growth	5.88E-03
48	GO:0042545: cell wall modification	6.03E-03
49	GO:0009624: response to nematode	6.22E-03
50	GO:0009833: plant-type primary cell wall biogenesis	6.34E-03
51	GO:0018105: peptidyl-serine phosphorylation	6.40E-03
52	GO:0030150: protein import into mitochondrial matrix	6.81E-03
53	GO:0006825: copper ion transport	7.30E-03
54	GO:0031408: oxylipin biosynthetic process	7.79E-03
55	GO:0080092: regulation of pollen tube growth	8.30E-03
56	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.82E-03
57	GO:0006355: regulation of transcription, DNA-templated	8.88E-03
58	GO:0030154: cell differentiation	9.10E-03
59	GO:0008284: positive regulation of cell proliferation	9.90E-03
60	GO:0010268: brassinosteroid homeostasis	1.10E-02
61	GO:0009960: endosperm development	1.10E-02
62	GO:0045489: pectin biosynthetic process	1.10E-02
63	GO:0009958: positive gravitropism	1.10E-02
64	GO:0010183: pollen tube guidance	1.22E-02
65	GO:0009749: response to glucose	1.22E-02
66	GO:0016132: brassinosteroid biosynthetic process	1.28E-02
67	GO:0080156: mitochondrial mRNA modification	1.28E-02
68	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.28E-02
69	GO:0009611: response to wounding	1.30E-02
70	GO:1901657: glycosyl compound metabolic process	1.40E-02
71	GO:0009828: plant-type cell wall loosening	1.46E-02
72	GO:0016125: sterol metabolic process	1.46E-02
73	GO:0009639: response to red or far red light	1.46E-02
74	GO:0009911: positive regulation of flower development	1.66E-02
75	GO:0010029: regulation of seed germination	1.73E-02
76	GO:0006974: cellular response to DNA damage stimulus	1.79E-02
77	GO:0016049: cell growth	1.93E-02
78	GO:0048767: root hair elongation	2.07E-02
79	GO:0006811: ion transport	2.15E-02
80	GO:0007568: aging	2.22E-02
81	GO:0048527: lateral root development	2.22E-02
82	GO:0016051: carbohydrate biosynthetic process	2.37E-02
83	GO:0009637: response to blue light	2.37E-02
84	GO:0009737: response to abscisic acid	2.49E-02
85	GO:0006897: endocytosis	2.68E-02
86	GO:0006631: fatty acid metabolic process	2.68E-02
87	GO:0009744: response to sucrose	2.84E-02
88	GO:0009640: photomorphogenesis	2.84E-02
89	GO:0008283: cell proliferation	2.84E-02
90	GO:0008643: carbohydrate transport	3.00E-02
91	GO:0009751: response to salicylic acid	3.02E-02
92	GO:0006979: response to oxidative stress	3.09E-02
93	GO:0009664: plant-type cell wall organization	3.34E-02
94	GO:0009809: lignin biosynthetic process	3.51E-02
95	GO:0043086: negative regulation of catalytic activity	3.95E-02
96	GO:0009409: response to cold	4.44E-02
97	GO:0009908: flower development	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0019177: dihydroneopterin triphosphate pyrophosphohydrolase activity	0.00E+00
2	GO:0035539: 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity	0.00E+00
3	GO:0008413: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity	0.00E+00
4	GO:0003883: CTP synthase activity	7.44E-06
5	GO:0004105: choline-phosphate cytidylyltransferase activity	1.30E-04
6	GO:0016629: 12-oxophytodienoate reductase activity	2.99E-04
7	GO:0008083: growth factor activity	3.27E-04
8	GO:0043565: sequence-specific DNA binding	4.10E-04
9	GO:0005457: GDP-fucose transmembrane transporter activity	4.92E-04
10	GO:0047325: inositol tetrakisphosphate 1-kinase activity	4.92E-04
11	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	4.92E-04
12	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	4.92E-04
13	GO:0005460: UDP-glucose transmembrane transporter activity	7.04E-04
14	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	7.04E-04
15	GO:0016985: mannan endo-1,4-beta-mannosidase activity	9.34E-04
16	GO:0015098: molybdate ion transmembrane transporter activity	9.34E-04
17	GO:0005459: UDP-galactose transmembrane transporter activity	1.18E-03
18	GO:0019139: cytokinin dehydrogenase activity	1.18E-03
19	GO:0000210: NAD+ diphosphatase activity	1.45E-03
20	GO:0044212: transcription regulatory region DNA binding	1.98E-03
21	GO:0016621: cinnamoyl-CoA reductase activity	2.04E-03
22	GO:0015288: porin activity	2.36E-03
23	GO:0008308: voltage-gated anion channel activity	2.69E-03
24	GO:0005543: phospholipid binding	4.18E-03
25	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.24E-03
26	GO:0045330: aspartyl esterase activity	4.84E-03
27	GO:0005262: calcium channel activity	5.00E-03
28	GO:0015266: protein channel activity	5.00E-03
29	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.44E-03
30	GO:0003774: motor activity	5.44E-03
31	GO:0030599: pectinesterase activity	5.86E-03
32	GO:0017025: TBP-class protein binding	5.88E-03
33	GO:0004857: enzyme inhibitor activity	6.81E-03
34	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.30E-03
35	GO:0030570: pectate lyase activity	8.82E-03
36	GO:0008514: organic anion transmembrane transporter activity	9.35E-03
37	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.00E-02
38	GO:0010181: FMN binding	1.16E-02
39	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.53E-02
40	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.79E-02
41	GO:0102483: scopolin beta-glucosidase activity	1.86E-02
42	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.00E-02
43	GO:0005516: calmodulin binding	2.11E-02
44	GO:0004222: metalloendopeptidase activity	2.15E-02
45	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.22E-02
46	GO:0008422: beta-glucosidase activity	2.52E-02
47	GO:0015171: amino acid transmembrane transporter activity	3.77E-02
48	GO:0008234: cysteine-type peptidase activity	3.77E-02
49	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.23E-02
50	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.23E-02
51	GO:0022857: transmembrane transporter activity	4.32E-02
52	GO:0016757: transferase activity, transferring glycosyl groups	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0031357: integral component of chloroplast inner membrane	8.43E-07
3	GO:0009527: plastid outer membrane	9.34E-04
4	GO:0031305: integral component of mitochondrial inner membrane	2.36E-03
5	GO:0046930: pore complex	2.69E-03
6	GO:0031012: extracellular matrix	5.00E-03
7	GO:0005622: intracellular	6.56E-03
8	GO:0005905: clathrin-coated pit	7.79E-03
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	9.35E-03
10	GO:0030136: clathrin-coated vesicle	9.90E-03
11	GO:0005615: extracellular space	1.20E-02
12	GO:0046658: anchored component of plasma membrane	1.43E-02
13	GO:0009707: chloroplast outer membrane	2.00E-02
14	GO:0005618: cell wall	2.17E-02
15	GO:0005768: endosome	2.68E-02
16	GO:0005635: nuclear envelope	3.68E-02
17	GO:0010008: endosome membrane	4.04E-02