co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G24730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:2001143: N-methylnicotinate transport	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:2001142: nicotinate transport	0.00E+00
5	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
6	GO:0010372: positive regulation of gibberellin biosynthetic process	7.96E-07
7	GO:0009699: phenylpropanoid biosynthetic process	1.34E-06
8	GO:0002679: respiratory burst involved in defense response	7.04E-06
9	GO:0006468: protein phosphorylation	2.27E-05
10	GO:0009306: protein secretion	3.43E-05
11	GO:0006744: ubiquinone biosynthetic process	6.22E-05
12	GO:0002229: defense response to oomycetes	6.91E-05
13	GO:0045010: actin nucleation	8.08E-05
14	GO:0006402: mRNA catabolic process	8.08E-05
15	GO:0042742: defense response to bacterium	8.25E-05
16	GO:0010200: response to chitin	8.78E-05
17	GO:0018920: glyphosate metabolic process	1.25E-04
18	GO:0003400: regulation of COPII vesicle coating	1.25E-04
19	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.25E-04
20	GO:0032491: detection of molecule of fungal origin	1.25E-04
21	GO:0046167: glycerol-3-phosphate biosynthetic process	1.25E-04
22	GO:0009966: regulation of signal transduction	1.25E-04
23	GO:0071277: cellular response to calcium ion	1.25E-04
24	GO:0051865: protein autoubiquitination	1.25E-04
25	GO:0007166: cell surface receptor signaling pathway	2.67E-04
26	GO:0046939: nucleotide phosphorylation	2.90E-04
27	GO:0010155: regulation of proton transport	2.90E-04
28	GO:0009805: coumarin biosynthetic process	2.90E-04
29	GO:0006641: triglyceride metabolic process	2.90E-04
30	GO:0034605: cellular response to heat	3.14E-04
31	GO:0009225: nucleotide-sugar metabolic process	3.52E-04
32	GO:0019563: glycerol catabolic process	4.78E-04
33	GO:0010447: response to acidic pH	4.78E-04
34	GO:0070475: rRNA base methylation	4.78E-04
35	GO:0080167: response to karrikin	6.02E-04
36	GO:0006817: phosphate ion transport	6.80E-04
37	GO:0071323: cellular response to chitin	6.85E-04
38	GO:0006072: glycerol-3-phosphate metabolic process	6.85E-04
39	GO:0030100: regulation of endocytosis	6.85E-04
40	GO:0009399: nitrogen fixation	6.85E-04
41	GO:0051131: chaperone-mediated protein complex assembly	6.85E-04
42	GO:0010188: response to microbial phytotoxin	9.08E-04
43	GO:1902347: response to strigolactone	9.08E-04
44	GO:0015743: malate transport	9.08E-04
45	GO:0045227: capsule polysaccharide biosynthetic process	9.08E-04
46	GO:0033320: UDP-D-xylose biosynthetic process	9.08E-04
47	GO:0033358: UDP-L-arabinose biosynthetic process	9.08E-04
48	GO:2000122: negative regulation of stomatal complex development	9.08E-04
49	GO:0071219: cellular response to molecule of bacterial origin	9.08E-04
50	GO:0048544: recognition of pollen	9.12E-04
51	GO:0031047: gene silencing by RNA	1.11E-03
52	GO:0030041: actin filament polymerization	1.15E-03
53	GO:1900425: negative regulation of defense response to bacterium	1.41E-03
54	GO:0000470: maturation of LSU-rRNA	1.41E-03
55	GO:0042732: D-xylose metabolic process	1.41E-03
56	GO:0048317: seed morphogenesis	1.41E-03
57	GO:0009423: chorismate biosynthetic process	1.68E-03
58	GO:0010044: response to aluminum ion	1.98E-03
59	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.98E-03
60	GO:0048658: anther wall tapetum development	2.29E-03
61	GO:1900150: regulation of defense response to fungus	2.29E-03
62	GO:0045087: innate immune response	2.43E-03
63	GO:0010052: guard cell differentiation	2.61E-03
64	GO:0017004: cytochrome complex assembly	2.61E-03
65	GO:0009808: lignin metabolic process	2.61E-03
66	GO:0009932: cell tip growth	2.61E-03
67	GO:0015996: chlorophyll catabolic process	2.61E-03
68	GO:0090333: regulation of stomatal closure	2.95E-03
69	GO:0046685: response to arsenic-containing substance	2.95E-03
70	GO:0008202: steroid metabolic process	3.31E-03
71	GO:0048829: root cap development	3.68E-03
72	GO:0019538: protein metabolic process	3.68E-03
73	GO:0007064: mitotic sister chromatid cohesion	3.68E-03
74	GO:0046777: protein autophosphorylation	3.82E-03
75	GO:0009073: aromatic amino acid family biosynthetic process	4.06E-03
76	GO:0010015: root morphogenesis	4.06E-03
77	GO:0009698: phenylpropanoid metabolic process	4.06E-03
78	GO:0009809: lignin biosynthetic process	4.20E-03
79	GO:0002237: response to molecule of bacterial origin	5.28E-03
80	GO:0090351: seedling development	5.71E-03
81	GO:0009408: response to heat	5.75E-03
82	GO:0006397: mRNA processing	6.07E-03
83	GO:0006396: RNA processing	6.13E-03
84	GO:0009742: brassinosteroid mediated signaling pathway	6.32E-03
85	GO:0009863: salicylic acid mediated signaling pathway	6.61E-03
86	GO:0061077: chaperone-mediated protein folding	7.56E-03
87	GO:0009845: seed germination	8.07E-03
88	GO:0040007: growth	8.56E-03
89	GO:0006012: galactose metabolic process	8.56E-03
90	GO:0071215: cellular response to abscisic acid stimulus	8.56E-03
91	GO:0009686: gibberellin biosynthetic process	8.56E-03
92	GO:0016310: phosphorylation	8.83E-03
93	GO:0042631: cellular response to water deprivation	1.01E-02
94	GO:0009960: endosperm development	1.07E-02
95	GO:0009617: response to bacterium	1.23E-02
96	GO:0035556: intracellular signal transduction	1.28E-02
97	GO:0016567: protein ubiquitination	1.28E-02
98	GO:0032502: developmental process	1.30E-02
99	GO:0010090: trichome morphogenesis	1.36E-02
100	GO:0046686: response to cadmium ion	1.46E-02
101	GO:0006904: vesicle docking involved in exocytosis	1.48E-02
102	GO:0016579: protein deubiquitination	1.54E-02
103	GO:0001666: response to hypoxia	1.61E-02
104	GO:0009615: response to virus	1.61E-02
105	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.67E-02
106	GO:0009816: defense response to bacterium, incompatible interaction	1.67E-02
107	GO:0048573: photoperiodism, flowering	1.81E-02
108	GO:0006888: ER to Golgi vesicle-mediated transport	1.81E-02
109	GO:0016049: cell growth	1.87E-02
110	GO:0008219: cell death	1.94E-02
111	GO:0009817: defense response to fungus, incompatible interaction	1.94E-02
112	GO:0009813: flavonoid biosynthetic process	2.01E-02
113	GO:0010311: lateral root formation	2.01E-02
114	GO:0016051: carbohydrate biosynthetic process	2.30E-02
115	GO:0009637: response to blue light	2.30E-02
116	GO:0006839: mitochondrial transport	2.52E-02
117	GO:0006887: exocytosis	2.60E-02
118	GO:0006897: endocytosis	2.60E-02
119	GO:0008283: cell proliferation	2.75E-02
120	GO:0009965: leaf morphogenesis	2.99E-02
121	GO:0010224: response to UV-B	3.49E-02
122	GO:0006952: defense response	3.53E-02
123	GO:0006857: oligopeptide transport	3.57E-02
124	GO:0043086: negative regulation of catalytic activity	3.83E-02
125	GO:0009620: response to fungus	4.10E-02
126	GO:0016569: covalent chromatin modification	4.19E-02
127	GO:0042545: cell wall modification	4.28E-02
128	GO:0018105: peptidyl-serine phosphorylation	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0046409: p-coumarate 3-hydroxylase activity	0.00E+00
2	GO:0004370: glycerol kinase activity	0.00E+00
3	GO:2001080: chitosan binding	0.00E+00
4	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
5	GO:0090416: nicotinate transporter activity	0.00E+00
6	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
7	GO:0005522: profilin binding	0.00E+00
8	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
9	GO:0005524: ATP binding	2.96E-07
10	GO:0016301: kinase activity	9.89E-06
11	GO:0004674: protein serine/threonine kinase activity	1.65E-05
12	GO:0005090: Sar guanyl-nucleotide exchange factor activity	1.25E-04
13	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	1.25E-04
14	GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity	1.25E-04
15	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.15E-04
16	GO:0019200: carbohydrate kinase activity	2.90E-04
17	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.90E-04
18	GO:0019201: nucleotide kinase activity	6.85E-04
19	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	6.85E-04
20	GO:0004842: ubiquitin-protein transferase activity	8.34E-04
21	GO:0005253: anion channel activity	9.08E-04
22	GO:0050373: UDP-arabinose 4-epimerase activity	9.08E-04
23	GO:0043015: gamma-tubulin binding	9.08E-04
24	GO:0019199: transmembrane receptor protein kinase activity	9.08E-04
25	GO:0004672: protein kinase activity	9.39E-04
26	GO:0004518: nuclease activity	1.11E-03
27	GO:0002020: protease binding	1.15E-03
28	GO:0004356: glutamate-ammonia ligase activity	1.15E-03
29	GO:0048040: UDP-glucuronate decarboxylase activity	1.41E-03
30	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.41E-03
31	GO:0035673: oligopeptide transmembrane transporter activity	1.41E-03
32	GO:0051020: GTPase binding	1.68E-03
33	GO:0070403: NAD+ binding	1.68E-03
34	GO:0003978: UDP-glucose 4-epimerase activity	1.68E-03
35	GO:0004017: adenylate kinase activity	1.68E-03
36	GO:0008143: poly(A) binding	1.98E-03
37	GO:0004143: diacylglycerol kinase activity	1.98E-03
38	GO:0015140: malate transmembrane transporter activity	1.98E-03
39	GO:0052747: sinapyl alcohol dehydrogenase activity	2.29E-03
40	GO:0004525: ribonuclease III activity	2.29E-03
41	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.29E-03
42	GO:0003951: NAD+ kinase activity	2.61E-03
43	GO:0008142: oxysterol binding	2.61E-03
44	GO:0016207: 4-coumarate-CoA ligase activity	2.95E-03
45	GO:0050660: flavin adenine dinucleotide binding	3.21E-03
46	GO:0003729: mRNA binding	3.69E-03
47	GO:0030246: carbohydrate binding	4.03E-03
48	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.45E-03
49	GO:0015198: oligopeptide transporter activity	4.45E-03
50	GO:0019888: protein phosphatase regulator activity	4.86E-03
51	GO:0008061: chitin binding	5.71E-03
52	GO:0003779: actin binding	5.78E-03
53	GO:0051082: unfolded protein binding	5.96E-03
54	GO:0009055: electron carrier activity	6.29E-03
55	GO:0033612: receptor serine/threonine kinase binding	7.56E-03
56	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	7.56E-03
57	GO:0022891: substrate-specific transmembrane transporter activity	8.56E-03
58	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.24E-02
59	GO:0042802: identical protein binding	1.31E-02
60	GO:0051015: actin filament binding	1.36E-02
61	GO:0003682: chromatin binding	1.69E-02
62	GO:0008375: acetylglucosaminyltransferase activity	1.74E-02
63	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.74E-02
64	GO:0004683: calmodulin-dependent protein kinase activity	1.81E-02
65	GO:0030247: polysaccharide binding	1.81E-02
66	GO:0005096: GTPase activator activity	2.01E-02
67	GO:0043621: protein self-association	2.91E-02
68	GO:0035091: phosphatidylinositol binding	2.91E-02
69	GO:0005515: protein binding	3.60E-02
70	GO:0045330: aspartyl esterase activity	3.66E-02
71	GO:0016874: ligase activity	4.19E-02
72	GO:0030599: pectinesterase activity	4.19E-02
73	GO:0022857: transmembrane transporter activity	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0016442: RISC complex	0.00E+00
2	GO:0005886: plasma membrane	2.47E-10
3	GO:0010494: cytoplasmic stress granule	1.90E-06
4	GO:0016021: integral component of membrane	6.45E-05
5	GO:0005911: cell-cell junction	1.25E-04
6	GO:0048471: perinuclear region of cytoplasm	2.10E-04
7	GO:0005746: mitochondrial respiratory chain	1.15E-03
8	GO:0032580: Golgi cisterna membrane	1.25E-03
9	GO:0000932: P-body	1.48E-03
10	GO:0016363: nuclear matrix	1.68E-03
11	GO:0005618: cell wall	2.08E-03
12	GO:0005829: cytosol	2.15E-03
13	GO:0005783: endoplasmic reticulum	2.46E-03
14	GO:0090404: pollen tube tip	4.06E-03
15	GO:0005635: nuclear envelope	4.49E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	5.71E-03
17	GO:0043234: protein complex	6.15E-03
18	GO:0005768: endosome	6.39E-03
19	GO:0005794: Golgi apparatus	9.17E-03
20	GO:0009505: plant-type cell wall	1.05E-02
21	GO:0000145: exocyst	1.30E-02
22	GO:0005778: peroxisomal membrane	1.48E-02
23	GO:0016020: membrane	1.54E-02
24	GO:0005774: vacuolar membrane	1.60E-02
25	GO:0009506: plasmodesma	2.72E-02
26	GO:0005743: mitochondrial inner membrane	2.73E-02
27	GO:0090406: pollen tube	2.75E-02
28	GO:0010008: endosome membrane	3.92E-02