GO Enrichment Analysis of Co-expressed Genes with
AT4G24620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0009658: chloroplast organization | 1.57E-05 |
| 6 | GO:0006419: alanyl-tRNA aminoacylation | 3.12E-05 |
| 7 | GO:0010493: Lewis a epitope biosynthetic process | 3.12E-05 |
| 8 | GO:0010020: chloroplast fission | 4.29E-05 |
| 9 | GO:0080181: lateral root branching | 7.88E-05 |
| 10 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 7.88E-05 |
| 11 | GO:0006432: phenylalanyl-tRNA aminoacylation | 7.88E-05 |
| 12 | GO:0018026: peptidyl-lysine monomethylation | 7.88E-05 |
| 13 | GO:0005977: glycogen metabolic process | 1.37E-04 |
| 14 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.04E-04 |
| 15 | GO:0009226: nucleotide-sugar biosynthetic process | 2.04E-04 |
| 16 | GO:0043572: plastid fission | 2.04E-04 |
| 17 | GO:2001141: regulation of RNA biosynthetic process | 2.04E-04 |
| 18 | GO:0006457: protein folding | 2.25E-04 |
| 19 | GO:0051781: positive regulation of cell division | 2.76E-04 |
| 20 | GO:0006546: glycine catabolic process | 2.76E-04 |
| 21 | GO:0010021: amylopectin biosynthetic process | 2.76E-04 |
| 22 | GO:0009793: embryo development ending in seed dormancy | 3.00E-04 |
| 23 | GO:0016558: protein import into peroxisome matrix | 3.53E-04 |
| 24 | GO:0006564: L-serine biosynthetic process | 3.53E-04 |
| 25 | GO:0042793: transcription from plastid promoter | 4.34E-04 |
| 26 | GO:1901259: chloroplast rRNA processing | 5.20E-04 |
| 27 | GO:0006400: tRNA modification | 6.07E-04 |
| 28 | GO:0009231: riboflavin biosynthetic process | 6.99E-04 |
| 29 | GO:0017004: cytochrome complex assembly | 7.94E-04 |
| 30 | GO:0071482: cellular response to light stimulus | 7.94E-04 |
| 31 | GO:0045036: protein targeting to chloroplast | 1.10E-03 |
| 32 | GO:0006352: DNA-templated transcription, initiation | 1.20E-03 |
| 33 | GO:0005983: starch catabolic process | 1.31E-03 |
| 34 | GO:0010030: positive regulation of seed germination | 1.67E-03 |
| 35 | GO:0071369: cellular response to ethylene stimulus | 2.46E-03 |
| 36 | GO:0042254: ribosome biogenesis | 2.64E-03 |
| 37 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.75E-03 |
| 38 | GO:0042631: cellular response to water deprivation | 2.90E-03 |
| 39 | GO:0000413: protein peptidyl-prolyl isomerization | 2.90E-03 |
| 40 | GO:0019252: starch biosynthetic process | 3.36E-03 |
| 41 | GO:0010193: response to ozone | 3.51E-03 |
| 42 | GO:0006635: fatty acid beta-oxidation | 3.51E-03 |
| 43 | GO:0016032: viral process | 3.68E-03 |
| 44 | GO:0010027: thylakoid membrane organization | 4.52E-03 |
| 45 | GO:0046686: response to cadmium ion | 4.97E-03 |
| 46 | GO:0018298: protein-chromophore linkage | 5.42E-03 |
| 47 | GO:0006499: N-terminal protein myristoylation | 5.79E-03 |
| 48 | GO:0007568: aging | 5.99E-03 |
| 49 | GO:0009637: response to blue light | 6.38E-03 |
| 50 | GO:0009867: jasmonic acid mediated signaling pathway | 6.38E-03 |
| 51 | GO:0010114: response to red light | 7.60E-03 |
| 52 | GO:0006364: rRNA processing | 9.36E-03 |
| 53 | GO:0006486: protein glycosylation | 9.36E-03 |
| 54 | GO:0010224: response to UV-B | 9.59E-03 |
| 55 | GO:0006096: glycolytic process | 1.05E-02 |
| 56 | GO:0048316: seed development | 1.08E-02 |
| 57 | GO:0009451: RNA modification | 1.80E-02 |
| 58 | GO:0006470: protein dephosphorylation | 1.94E-02 |
| 59 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.88E-02 |
| 60 | GO:0006281: DNA repair | 3.71E-02 |
| 61 | GO:0009408: response to heat | 3.71E-02 |
| 62 | GO:0008152: metabolic process | 3.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 2 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 3 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 4 | GO:0046920: alpha-(1->3)-fucosyltransferase activity | 3.12E-05 |
| 5 | GO:0050308: sugar-phosphatase activity | 3.12E-05 |
| 6 | GO:0004813: alanine-tRNA ligase activity | 3.12E-05 |
| 7 | GO:0019203: carbohydrate phosphatase activity | 3.12E-05 |
| 8 | GO:0000049: tRNA binding | 3.17E-05 |
| 9 | GO:0004617: phosphoglycerate dehydrogenase activity | 7.88E-05 |
| 10 | GO:0004047: aminomethyltransferase activity | 7.88E-05 |
| 11 | GO:0004826: phenylalanine-tRNA ligase activity | 7.88E-05 |
| 12 | GO:0019156: isoamylase activity | 7.88E-05 |
| 13 | GO:0003913: DNA photolyase activity | 1.37E-04 |
| 14 | GO:0004751: ribose-5-phosphate isomerase activity | 1.37E-04 |
| 15 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 2.04E-04 |
| 16 | GO:0016597: amino acid binding | 2.39E-04 |
| 17 | GO:0016279: protein-lysine N-methyltransferase activity | 2.76E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 2.76E-04 |
| 19 | GO:0016987: sigma factor activity | 2.76E-04 |
| 20 | GO:2001070: starch binding | 4.34E-04 |
| 21 | GO:0004556: alpha-amylase activity | 4.34E-04 |
| 22 | GO:0009881: photoreceptor activity | 6.07E-04 |
| 23 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.24E-04 |
| 24 | GO:0043022: ribosome binding | 6.99E-04 |
| 25 | GO:0008417: fucosyltransferase activity | 8.92E-04 |
| 26 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 8.92E-04 |
| 27 | GO:0051082: unfolded protein binding | 1.00E-03 |
| 28 | GO:0031072: heat shock protein binding | 1.43E-03 |
| 29 | GO:0043424: protein histidine kinase binding | 2.05E-03 |
| 30 | GO:0004176: ATP-dependent peptidase activity | 2.19E-03 |
| 31 | GO:0008483: transaminase activity | 4.17E-03 |
| 32 | GO:0008237: metallopeptidase activity | 4.17E-03 |
| 33 | GO:0004222: metalloendopeptidase activity | 5.79E-03 |
| 34 | GO:0003746: translation elongation factor activity | 6.38E-03 |
| 35 | GO:0016887: ATPase activity | 7.27E-03 |
| 36 | GO:0005198: structural molecule activity | 8.24E-03 |
| 37 | GO:0051287: NAD binding | 8.68E-03 |
| 38 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.36E-03 |
| 39 | GO:0005524: ATP binding | 9.54E-03 |
| 40 | GO:0008026: ATP-dependent helicase activity | 1.25E-02 |
| 41 | GO:0019843: rRNA binding | 1.41E-02 |
| 42 | GO:0008017: microtubule binding | 1.82E-02 |
| 43 | GO:0042802: identical protein binding | 2.09E-02 |
| 44 | GO:0003924: GTPase activity | 3.71E-02 |
| 45 | GO:0003723: RNA binding | 3.79E-02 |
| 46 | GO:0009055: electron carrier activity | 3.90E-02 |
| 47 | GO:0004519: endonuclease activity | 3.93E-02 |
| 48 | GO:0005515: protein binding | 4.43E-02 |
| 49 | GO:0008289: lipid binding | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 4.79E-21 |
| 4 | GO:0009570: chloroplast stroma | 7.63E-08 |
| 5 | GO:0042646: plastid nucleoid | 6.36E-07 |
| 6 | GO:0009534: chloroplast thylakoid | 1.65E-05 |
| 7 | GO:0009941: chloroplast envelope | 3.13E-05 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 3.63E-05 |
| 9 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 7.88E-05 |
| 10 | GO:0009532: plastid stroma | 7.90E-05 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 9.14E-05 |
| 12 | GO:0016363: nuclear matrix | 5.20E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 6.07E-04 |
| 14 | GO:0042644: chloroplast nucleoid | 8.92E-04 |
| 15 | GO:0055028: cortical microtubule | 1.10E-03 |
| 16 | GO:0022626: cytosolic ribosome | 1.11E-03 |
| 17 | GO:0009508: plastid chromosome | 1.43E-03 |
| 18 | GO:0009579: thylakoid | 1.46E-03 |
| 19 | GO:0005759: mitochondrial matrix | 1.54E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 1.55E-03 |
| 21 | GO:0042651: thylakoid membrane | 2.05E-03 |
| 22 | GO:0005874: microtubule | 3.09E-03 |
| 23 | GO:0032580: Golgi cisterna membrane | 4.00E-03 |
| 24 | GO:0009295: nucleoid | 4.17E-03 |
| 25 | GO:0005778: peroxisomal membrane | 4.17E-03 |
| 26 | GO:0015934: large ribosomal subunit | 5.99E-03 |
| 27 | GO:0031977: thylakoid lumen | 7.19E-03 |
| 28 | GO:0009706: chloroplast inner membrane | 1.20E-02 |
| 29 | GO:0005623: cell | 1.43E-02 |
| 30 | GO:0005840: ribosome | 1.77E-02 |
| 31 | GO:0046658: anchored component of plasma membrane | 2.16E-02 |
| 32 | GO:0043231: intracellular membrane-bounded organelle | 3.97E-02 |