co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G24570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007141: male meiosis I	0.00E+00
2	GO:0009667: plastid inner membrane organization	0.00E+00
3	GO:1904526: regulation of microtubule binding	0.00E+00
4	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
5	GO:0071289: cellular response to nickel ion	0.00E+00
6	GO:0010200: response to chitin	2.10E-08
7	GO:0009409: response to cold	3.30E-06
8	GO:2000070: regulation of response to water deprivation	8.68E-06
9	GO:0009631: cold acclimation	9.65E-06
10	GO:0042335: cuticle development	1.72E-05
11	GO:0009414: response to water deprivation	2.79E-05
12	GO:0009873: ethylene-activated signaling pathway	2.97E-05
13	GO:0010104: regulation of ethylene-activated signaling pathway	3.50E-05
14	GO:0009737: response to abscisic acid	1.16E-04
15	GO:0006631: fatty acid metabolic process	2.16E-04
16	GO:1902265: abscisic acid homeostasis	3.11E-04
17	GO:0009865: pollen tube adhesion	3.11E-04
18	GO:0080051: cutin transport	3.11E-04
19	GO:0033481: galacturonate biosynthetic process	3.11E-04
20	GO:0009609: response to symbiotic bacterium	3.11E-04
21	GO:0009819: drought recovery	3.21E-04
22	GO:0019760: glucosinolate metabolic process	5.37E-04
23	GO:2000280: regulation of root development	5.59E-04
24	GO:0015908: fatty acid transport	6.81E-04
25	GO:0006898: receptor-mediated endocytosis	6.81E-04
26	GO:0015786: UDP-glucose transport	6.81E-04
27	GO:1901679: nucleotide transmembrane transport	6.81E-04
28	GO:0031407: oxylipin metabolic process	6.81E-04
29	GO:0010289: homogalacturonan biosynthetic process	6.81E-04
30	GO:0048569: post-embryonic animal organ development	6.81E-04
31	GO:0052544: defense response by callose deposition in cell wall	7.52E-04
32	GO:0000038: very long-chain fatty acid metabolic process	7.52E-04
33	GO:0005983: starch catabolic process	8.60E-04
34	GO:0050826: response to freezing	9.73E-04
35	GO:0006811: ion transport	1.06E-03
36	GO:0010143: cutin biosynthetic process	1.09E-03
37	GO:0080121: AMP transport	1.10E-03
38	GO:0042344: indole glucosinolate catabolic process	1.10E-03
39	GO:0071367: cellular response to brassinosteroid stimulus	1.10E-03
40	GO:0016045: detection of bacterium	1.10E-03
41	GO:0009062: fatty acid catabolic process	1.10E-03
42	GO:0010359: regulation of anion channel activity	1.10E-03
43	GO:0090630: activation of GTPase activity	1.10E-03
44	GO:0015783: GDP-fucose transport	1.10E-03
45	GO:0010025: wax biosynthetic process	1.36E-03
46	GO:0010150: leaf senescence	1.58E-03
47	GO:0051259: protein oligomerization	1.58E-03
48	GO:0010371: regulation of gibberellin biosynthetic process	1.58E-03
49	GO:1901000: regulation of response to salt stress	1.58E-03
50	GO:0072334: UDP-galactose transmembrane transport	1.58E-03
51	GO:0030100: regulation of endocytosis	1.58E-03
52	GO:0009644: response to high light intensity	1.91E-03
53	GO:0006552: leucine catabolic process	2.12E-03
54	GO:0071585: detoxification of cadmium ion	2.12E-03
55	GO:0015867: ATP transport	2.12E-03
56	GO:0010222: stem vascular tissue pattern formation	2.12E-03
57	GO:0009687: abscisic acid metabolic process	2.12E-03
58	GO:0046345: abscisic acid catabolic process	2.12E-03
59	GO:0022622: root system development	2.12E-03
60	GO:0001944: vasculature development	2.17E-03
61	GO:0042538: hyperosmotic salinity response	2.31E-03
62	GO:0009823: cytokinin catabolic process	2.71E-03
63	GO:0006873: cellular ion homeostasis	2.71E-03
64	GO:0006461: protein complex assembly	2.71E-03
65	GO:0006665: sphingolipid metabolic process	2.71E-03
66	GO:0042631: cellular response to water deprivation	2.76E-03
67	GO:0048868: pollen tube development	2.98E-03
68	GO:0035435: phosphate ion transmembrane transport	3.35E-03
69	GO:1900425: negative regulation of defense response to bacterium	3.35E-03
70	GO:0006574: valine catabolic process	3.35E-03
71	GO:0015866: ADP transport	3.35E-03
72	GO:0048232: male gamete generation	3.35E-03
73	GO:0000302: response to reactive oxygen species	3.68E-03
74	GO:0045926: negative regulation of growth	4.03E-03
75	GO:0009082: branched-chain amino acid biosynthetic process	4.03E-03
76	GO:0098655: cation transmembrane transport	4.03E-03
77	GO:0010555: response to mannitol	4.03E-03
78	GO:0071470: cellular response to osmotic stress	4.03E-03
79	GO:0050829: defense response to Gram-negative bacterium	4.76E-03
80	GO:0030307: positive regulation of cell growth	4.76E-03
81	GO:1902074: response to salt	4.76E-03
82	GO:0010103: stomatal complex morphogenesis	4.76E-03
83	GO:0032880: regulation of protein localization	4.76E-03
84	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.76E-03
85	GO:0009610: response to symbiotic fungus	4.76E-03
86	GO:0030497: fatty acid elongation	4.76E-03
87	GO:0009611: response to wounding	5.46E-03
88	GO:0009690: cytokinin metabolic process	5.53E-03
89	GO:0009415: response to water	5.53E-03
90	GO:0050821: protein stabilization	5.53E-03
91	GO:0007155: cell adhesion	5.53E-03
92	GO:0001558: regulation of cell growth	6.33E-03
93	GO:0009827: plant-type cell wall modification	6.33E-03
94	GO:0006633: fatty acid biosynthetic process	7.07E-03
95	GO:0051865: protein autoubiquitination	7.19E-03
96	GO:0098656: anion transmembrane transport	7.19E-03
97	GO:0006098: pentose-phosphate shunt	7.19E-03
98	GO:0050832: defense response to fungus	7.35E-03
99	GO:0007623: circadian rhythm	7.97E-03
100	GO:0048527: lateral root development	8.02E-03
101	GO:0042761: very long-chain fatty acid biosynthetic process	8.07E-03
102	GO:0048268: clathrin coat assembly	8.07E-03
103	GO:0051026: chiasma assembly	9.00E-03
104	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.19E-03
105	GO:0009682: induced systemic resistance	9.96E-03
106	GO:0016024: CDP-diacylglycerol biosynthetic process	1.10E-02
107	GO:0045037: protein import into chloroplast stroma	1.10E-02
108	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.10E-02
109	GO:0000209: protein polyubiquitination	1.18E-02
110	GO:0010588: cotyledon vascular tissue pattern formation	1.20E-02
111	GO:2000012: regulation of auxin polar transport	1.20E-02
112	GO:0048440: carpel development	1.31E-02
113	GO:0010030: positive regulation of seed germination	1.42E-02
114	GO:0070588: calcium ion transmembrane transport	1.42E-02
115	GO:0009225: nucleotide-sugar metabolic process	1.42E-02
116	GO:0009833: plant-type primary cell wall biogenesis	1.53E-02
117	GO:0030150: protein import into mitochondrial matrix	1.65E-02
118	GO:0007017: microtubule-based process	1.77E-02
119	GO:0009695: jasmonic acid biosynthetic process	1.77E-02
120	GO:0051302: regulation of cell division	1.77E-02
121	GO:0043086: negative regulation of catalytic activity	1.82E-02
122	GO:0080167: response to karrikin	1.83E-02
123	GO:0009416: response to light stimulus	1.84E-02
124	GO:0048367: shoot system development	1.88E-02
125	GO:0031408: oxylipin biosynthetic process	1.89E-02
126	GO:0051260: protein homooligomerization	1.89E-02
127	GO:0019915: lipid storage	1.89E-02
128	GO:0009269: response to desiccation	1.89E-02
129	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.91E-02
130	GO:0007131: reciprocal meiotic recombination	2.01E-02
131	GO:0010017: red or far-red light signaling pathway	2.01E-02
132	GO:0042545: cell wall modification	2.13E-02
133	GO:0071215: cellular response to abscisic acid stimulus	2.14E-02
134	GO:0071369: cellular response to ethylene stimulus	2.14E-02
135	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.14E-02
136	GO:0009624: response to nematode	2.19E-02
137	GO:0010091: trichome branching	2.27E-02
138	GO:0045892: negative regulation of transcription, DNA-templated	2.34E-02
139	GO:0070417: cellular response to cold	2.41E-02
140	GO:0008284: positive regulation of cell proliferation	2.41E-02
141	GO:0009651: response to salt stress	2.42E-02
142	GO:0048653: anther development	2.55E-02
143	GO:0010154: fruit development	2.68E-02
144	GO:0009958: positive gravitropism	2.68E-02
145	GO:0009741: response to brassinosteroid	2.68E-02
146	GO:0010268: brassinosteroid homeostasis	2.68E-02
147	GO:0045489: pectin biosynthetic process	2.68E-02
148	GO:0009751: response to salicylic acid	2.92E-02
149	GO:0009749: response to glucose	2.97E-02
150	GO:0019252: starch biosynthetic process	2.97E-02
151	GO:0008654: phospholipid biosynthetic process	2.97E-02
152	GO:0006635: fatty acid beta-oxidation	3.12E-02
153	GO:0016132: brassinosteroid biosynthetic process	3.12E-02
154	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.12E-02
155	GO:0010583: response to cyclopentenone	3.27E-02
156	GO:0009639: response to red or far red light	3.58E-02
157	GO:0009828: plant-type cell wall loosening	3.58E-02
158	GO:0006310: DNA recombination	3.58E-02
159	GO:0016125: sterol metabolic process	3.58E-02
160	GO:0005975: carbohydrate metabolic process	3.60E-02
161	GO:0010286: heat acclimation	3.73E-02
162	GO:0045490: pectin catabolic process	3.78E-02
163	GO:0009816: defense response to bacterium, incompatible interaction	4.22E-02
164	GO:0007166: cell surface receptor signaling pathway	4.32E-02
165	GO:0006974: cellular response to DNA damage stimulus	4.38E-02
166	GO:0009617: response to bacterium	4.50E-02
167	GO:0010468: regulation of gene expression	4.50E-02
168	GO:0016049: cell growth	4.72E-02
169	GO:0048481: plant ovule development	4.89E-02
170	GO:0030244: cellulose biosynthetic process	4.89E-02
171	GO:0009817: defense response to fungus, incompatible interaction	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005534: galactose binding	0.00E+00
2	GO:0051060: pullulanase activity	0.00E+00
3	GO:0010303: limit dextrinase activity	0.00E+00
4	GO:0017048: Rho GTPase binding	0.00E+00
5	GO:0009922: fatty acid elongase activity	1.07E-06
6	GO:0070330: aromatase activity	1.57E-05
7	GO:0018685: alkane 1-monooxygenase activity	9.88E-05
8	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.02E-04
9	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.02E-04
10	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.02E-04
11	GO:0004556: alpha-amylase activity	1.43E-04
12	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.43E-04
13	GO:0015245: fatty acid transporter activity	3.11E-04
14	GO:0008809: carnitine racemase activity	3.11E-04
15	GO:0016629: 12-oxophytodienoate reductase activity	6.81E-04
16	GO:0017022: myosin binding	6.81E-04
17	GO:0017040: ceramidase activity	6.81E-04
18	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.10E-03
19	GO:0046423: allene-oxide cyclase activity	1.10E-03
20	GO:0005457: GDP-fucose transmembrane transporter activity	1.10E-03
21	GO:0003883: CTP synthase activity	1.58E-03
22	GO:0005460: UDP-glucose transmembrane transporter activity	1.58E-03
23	GO:0052656: L-isoleucine transaminase activity	1.58E-03
24	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.58E-03
25	GO:0052654: L-leucine transaminase activity	1.58E-03
26	GO:0052655: L-valine transaminase activity	1.58E-03
27	GO:0043565: sequence-specific DNA binding	1.82E-03
28	GO:0004084: branched-chain-amino-acid transaminase activity	2.12E-03
29	GO:0050378: UDP-glucuronate 4-epimerase activity	2.12E-03
30	GO:0080122: AMP transmembrane transporter activity	2.71E-03
31	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.71E-03
32	GO:0010294: abscisic acid glucosyltransferase activity	2.71E-03
33	GO:0005459: UDP-galactose transmembrane transporter activity	2.71E-03
34	GO:0019139: cytokinin dehydrogenase activity	2.71E-03
35	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.35E-03
36	GO:0019137: thioglucosidase activity	3.35E-03
37	GO:0005347: ATP transmembrane transporter activity	4.03E-03
38	GO:0015217: ADP transmembrane transporter activity	4.03E-03
39	GO:0016746: transferase activity, transferring acyl groups	4.12E-03
40	GO:0016791: phosphatase activity	4.45E-03
41	GO:0061630: ubiquitin protein ligase activity	4.63E-03
42	GO:0015288: porin activity	5.53E-03
43	GO:0016209: antioxidant activity	5.53E-03
44	GO:0008308: voltage-gated anion channel activity	6.33E-03
45	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.28E-03
46	GO:0005096: GTPase activator activity	7.29E-03
47	GO:0005545: 1-phosphatidylinositol binding	9.00E-03
48	GO:0015020: glucuronosyltransferase activity	9.00E-03
49	GO:0004864: protein phosphatase inhibitor activity	9.00E-03
50	GO:0003680: AT DNA binding	9.96E-03
51	GO:0015266: protein channel activity	1.20E-02
52	GO:0005262: calcium channel activity	1.20E-02
53	GO:0015114: phosphate ion transmembrane transporter activity	1.20E-02
54	GO:0008289: lipid binding	1.28E-02
55	GO:0008083: growth factor activity	1.31E-02
56	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.31E-02
57	GO:0045330: aspartyl esterase activity	1.70E-02
58	GO:0044212: transcription regulatory region DNA binding	1.79E-02
59	GO:0004707: MAP kinase activity	1.89E-02
60	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.00E-02
61	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.00E-02
62	GO:0016874: ligase activity	2.06E-02
63	GO:0030599: pectinesterase activity	2.06E-02
64	GO:0018024: histone-lysine N-methyltransferase activity	2.41E-02
65	GO:0030276: clathrin binding	2.68E-02
66	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.78E-02
67	GO:0010181: FMN binding	2.83E-02
68	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.91E-02
69	GO:0046910: pectinesterase inhibitor activity	3.53E-02
70	GO:0005200: structural constituent of cytoskeleton	3.73E-02
71	GO:0016413: O-acetyltransferase activity	3.89E-02
72	GO:0008375: acetylglucosaminyltransferase activity	4.38E-02
73	GO:0102483: scopolin beta-glucosidase activity	4.55E-02
74	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.72E-02
75	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0070382: exocytic vesicle	3.11E-04
3	GO:0046658: anchored component of plasma membrane	5.03E-04
4	GO:0031357: integral component of chloroplast inner membrane	6.81E-04
5	GO:0030133: transport vesicle	6.81E-04
6	GO:0016021: integral component of membrane	1.04E-03
7	GO:0009897: external side of plasma membrane	1.10E-03
8	GO:0045177: apical part of cell	1.58E-03
9	GO:0009527: plastid outer membrane	2.12E-03
10	GO:0016020: membrane	2.53E-03
11	GO:0009505: plant-type cell wall	2.97E-03
12	GO:0005798: Golgi-associated vesicle	3.35E-03
13	GO:0031305: integral component of mitochondrial inner membrane	5.53E-03
14	GO:0046930: pore complex	6.33E-03
15	GO:0045298: tubulin complex	7.19E-03
16	GO:0016604: nuclear body	8.07E-03
17	GO:0005938: cell cortex	1.20E-02
18	GO:0005768: endosome	1.49E-02
19	GO:0005769: early endosome	1.53E-02
20	GO:0005905: clathrin-coated pit	1.89E-02
21	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.27E-02
22	GO:0030136: clathrin-coated vesicle	2.41E-02
23	GO:0000790: nuclear chromatin	2.41E-02
24	GO:0005694: chromosome	3.27E-02
25	GO:0005618: cell wall	3.39E-02
26	GO:0031225: anchored component of membrane	3.55E-02
27	GO:0032580: Golgi cisterna membrane	3.58E-02
28	GO:0005802: trans-Golgi network	3.69E-02
29	GO:0010319: stromule	3.73E-02
30	GO:0005615: extracellular space	4.23E-02
31	GO:0009941: chloroplast envelope	4.75E-02
32	GO:0009707: chloroplast outer membrane	4.89E-02