Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G24510

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033494: ferulate metabolic process0.00E+00
2GO:0090627: plant epidermal cell differentiation0.00E+00
3GO:1904526: regulation of microtubule binding0.00E+00
4GO:0035437: maintenance of protein localization in endoplasmic reticulum0.00E+00
5GO:0010378: temperature compensation of the circadian clock0.00E+00
6GO:1905177: tracheary element differentiation0.00E+00
7GO:0019593: mannitol biosynthetic process0.00E+00
8GO:0042335: cuticle development2.79E-09
9GO:0010025: wax biosynthetic process8.95E-09
10GO:0010143: cutin biosynthetic process2.26E-07
11GO:0009409: response to cold6.39E-07
12GO:0006633: fatty acid biosynthetic process2.39E-06
13GO:0009631: cold acclimation3.40E-06
14GO:0000038: very long-chain fatty acid metabolic process3.73E-06
15GO:0070417: cellular response to cold5.61E-05
16GO:0006631: fatty acid metabolic process8.78E-05
17GO:0005983: starch catabolic process1.34E-04
18GO:0009873: ethylene-activated signaling pathway2.33E-04
19GO:0009913: epidermal cell differentiation2.93E-04
20GO:0035435: phosphate ion transmembrane transport2.93E-04
21GO:0045926: negative regulation of growth3.92E-04
22GO:0009737: response to abscisic acid4.05E-04
23GO:0009609: response to symbiotic bacterium4.92E-04
24GO:1902265: abscisic acid homeostasis4.92E-04
25GO:0032958: inositol phosphate biosynthetic process4.92E-04
26GO:0042759: long-chain fatty acid biosynthetic process4.92E-04
27GO:0080051: cutin transport4.92E-04
28GO:0033481: galacturonate biosynthetic process4.92E-04
29GO:0050829: defense response to Gram-negative bacterium5.03E-04
30GO:0009610: response to symbiotic fungus5.03E-04
31GO:0009819: drought recovery6.27E-04
32GO:2000070: regulation of response to water deprivation6.27E-04
33GO:0009827: plant-type cell wall modification7.64E-04
34GO:0080167: response to karrikin8.35E-04
35GO:0000302: response to reactive oxygen species9.86E-04
36GO:0010115: regulation of abscisic acid biosynthetic process1.06E-03
37GO:1901679: nucleotide transmembrane transport1.06E-03
38GO:0015786: UDP-glucose transport1.06E-03
39GO:0015908: fatty acid transport1.06E-03
40GO:1901959: positive regulation of cutin biosynthetic process1.06E-03
41GO:0006898: receptor-mediated endocytosis1.06E-03
42GO:0010353: response to trehalose1.06E-03
43GO:0015709: thiosulfate transport1.06E-03
44GO:0071422: succinate transmembrane transport1.06E-03
45GO:0031407: oxylipin metabolic process1.06E-03
46GO:0010289: homogalacturonan biosynthetic process1.06E-03
47GO:0048569: post-embryonic animal organ development1.06E-03
48GO:0009809: lignin biosynthetic process1.14E-03
49GO:0030148: sphingolipid biosynthetic process1.45E-03
50GO:0051211: anisotropic cell growth1.73E-03
51GO:0071367: cellular response to brassinosteroid stimulus1.73E-03
52GO:0044210: 'de novo' CTP biosynthetic process1.73E-03
53GO:0016045: detection of bacterium1.73E-03
54GO:0009062: fatty acid catabolic process1.73E-03
55GO:0010359: regulation of anion channel activity1.73E-03
56GO:0010623: programmed cell death involved in cell development1.73E-03
57GO:0080121: AMP transport1.73E-03
58GO:1904278: positive regulation of wax biosynthetic process1.73E-03
59GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.73E-03
60GO:0006081: cellular aldehyde metabolic process1.73E-03
61GO:0015783: GDP-fucose transport1.73E-03
62GO:0010325: raffinose family oligosaccharide biosynthetic process1.73E-03
63GO:0009817: defense response to fungus, incompatible interaction2.21E-03
64GO:0030244: cellulose biosynthetic process2.21E-03
65GO:0070588: calcium ion transmembrane transport2.38E-03
66GO:0072334: UDP-galactose transmembrane transport2.51E-03
67GO:0043481: anthocyanin accumulation in tissues in response to UV light2.51E-03
68GO:0030100: regulation of endocytosis2.51E-03
69GO:0010104: regulation of ethylene-activated signaling pathway2.51E-03
70GO:1901332: negative regulation of lateral root development2.51E-03
71GO:0006624: vacuolar protein processing2.51E-03
72GO:0006020: inositol metabolic process2.51E-03
73GO:1901000: regulation of response to salt stress2.51E-03
74GO:0015729: oxaloacetate transport2.51E-03
75GO:0009833: plant-type primary cell wall biogenesis2.66E-03
76GO:0071555: cell wall organization2.89E-03
77GO:0009637: response to blue light2.99E-03
78GO:0071585: detoxification of cadmium ion3.38E-03
79GO:0045727: positive regulation of translation3.38E-03
80GO:2000122: negative regulation of stomatal complex development3.38E-03
81GO:0022622: root system development3.38E-03
82GO:0042991: transcription factor import into nucleus3.38E-03
83GO:0045723: positive regulation of fatty acid biosynthetic process3.38E-03
84GO:0006552: leucine catabolic process3.38E-03
85GO:0010508: positive regulation of autophagy3.38E-03
86GO:0015867: ATP transport3.38E-03
87GO:0010037: response to carbon dioxide3.38E-03
88GO:0010222: stem vascular tissue pattern formation3.38E-03
89GO:0009687: abscisic acid metabolic process3.38E-03
90GO:0015976: carbon utilization3.38E-03
91GO:0046345: abscisic acid catabolic process3.38E-03
92GO:0051365: cellular response to potassium ion starvation3.38E-03
93GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.44E-03
94GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.28E-03
95GO:0001944: vasculature development4.28E-03
96GO:0048578: positive regulation of long-day photoperiodism, flowering4.33E-03
97GO:0009697: salicylic acid biosynthetic process4.33E-03
98GO:0071423: malate transmembrane transport4.33E-03
99GO:0009823: cytokinin catabolic process4.33E-03
100GO:0006656: phosphatidylcholine biosynthetic process4.33E-03
101GO:0048497: maintenance of floral organ identity4.33E-03
102GO:0006461: protein complex assembly4.33E-03
103GO:0006665: sphingolipid metabolic process4.33E-03
104GO:0045490: pectin catabolic process4.52E-03
105GO:0047484: regulation of response to osmotic stress5.37E-03
106GO:0045962: positive regulation of development, heterochronic5.37E-03
107GO:1900425: negative regulation of defense response to bacterium5.37E-03
108GO:0006574: valine catabolic process5.37E-03
109GO:0015866: ADP transport5.37E-03
110GO:0042631: cellular response to water deprivation5.46E-03
111GO:0006470: protein dephosphorylation5.54E-03
112GO:0009416: response to light stimulus5.63E-03
113GO:0009611: response to wounding5.87E-03
114GO:0045489: pectin biosynthetic process5.89E-03
115GO:0042372: phylloquinone biosynthetic process6.48E-03
116GO:0009082: branched-chain amino acid biosynthetic process6.48E-03
117GO:0098655: cation transmembrane transport6.48E-03
118GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.48E-03
119GO:0010555: response to mannitol6.48E-03
120GO:0080086: stamen filament development6.48E-03
121GO:0009955: adaxial/abaxial pattern specification6.48E-03
122GO:0071470: cellular response to osmotic stress6.48E-03
123GO:0048825: cotyledon development6.80E-03
124GO:0019252: starch biosynthetic process6.80E-03
125GO:0030497: fatty acid elongation7.66E-03
126GO:0008272: sulfate transport7.66E-03
127GO:1902074: response to salt7.66E-03
128GO:0010103: stomatal complex morphogenesis7.66E-03
129GO:0032880: regulation of protein localization7.66E-03
130GO:0009414: response to water deprivation7.73E-03
131GO:0006979: response to oxidative stress8.27E-03
132GO:0009828: plant-type cell wall loosening8.84E-03
133GO:0008610: lipid biosynthetic process8.92E-03
134GO:0005978: glycogen biosynthetic process8.92E-03
135GO:0035265: organ growth8.92E-03
136GO:0009690: cytokinin metabolic process8.92E-03
137GO:0009415: response to water8.92E-03
138GO:0042255: ribosome assembly8.92E-03
139GO:0006353: DNA-templated transcription, termination8.92E-03
140GO:0007155: cell adhesion8.92E-03
141GO:0042545: cell wall modification9.16E-03
142GO:0006904: vesicle docking involved in exocytosis9.40E-03
143GO:0009624: response to nematode9.51E-03
144GO:0006970: response to osmotic stress9.84E-03
145GO:0001558: regulation of cell growth1.03E-02
146GO:0032544: plastid translation1.03E-02
147GO:0009911: positive regulation of flower development1.06E-02
148GO:0006098: pentose-phosphate shunt1.17E-02
149GO:0010345: suberin biosynthetic process1.17E-02
150GO:0098656: anion transmembrane transport1.17E-02
151GO:0009638: phototropism1.31E-02
152GO:0042761: very long-chain fatty acid biosynthetic process1.31E-02
153GO:2000280: regulation of root development1.31E-02
154GO:0048268: clathrin coat assembly1.31E-02
155GO:0009058: biosynthetic process1.36E-02
156GO:0006355: regulation of transcription, DNA-templated1.46E-02
157GO:0006949: syncytium formation1.46E-02
158GO:0048767: root hair elongation1.46E-02
159GO:0009735: response to cytokinin1.49E-02
160GO:0006811: ion transport1.53E-02
161GO:0050832: defense response to fungus1.58E-02
162GO:0052544: defense response by callose deposition in cell wall1.62E-02
163GO:0048765: root hair cell differentiation1.62E-02
164GO:0016051: carbohydrate biosynthetic process1.76E-02
165GO:0016024: CDP-diacylglycerol biosynthetic process1.79E-02
166GO:0010105: negative regulation of ethylene-activated signaling pathway1.79E-02
167GO:0045037: protein import into chloroplast stroma1.79E-02
168GO:0007623: circadian rhythm1.91E-02
169GO:0010150: leaf senescence1.91E-02
170GO:0010588: cotyledon vascular tissue pattern formation1.96E-02
171GO:2000012: regulation of auxin polar transport1.96E-02
172GO:0018107: peptidyl-threonine phosphorylation1.96E-02
173GO:0009725: response to hormone1.96E-02
174GO:0005986: sucrose biosynthetic process1.96E-02
175GO:0005975: carbohydrate metabolic process1.97E-02
176GO:0006839: mitochondrial transport2.01E-02
177GO:0016042: lipid catabolic process2.10E-02
178GO:0009887: animal organ morphogenesis2.13E-02
179GO:0009651: response to salt stress2.13E-02
180GO:0010540: basipetal auxin transport2.13E-02
181GO:0009744: response to sucrose2.27E-02
182GO:0010030: positive regulation of seed germination2.31E-02
183GO:0009225: nucleotide-sugar metabolic process2.31E-02
184GO:0010468: regulation of gene expression2.39E-02
185GO:0055085: transmembrane transport2.61E-02
186GO:0030150: protein import into mitochondrial matrix2.69E-02
187GO:0006289: nucleotide-excision repair2.69E-02
188GO:0009664: plant-type cell wall organization2.85E-02
189GO:0042538: hyperosmotic salinity response2.85E-02
190GO:0007017: microtubule-based process2.89E-02
191GO:0051302: regulation of cell division2.89E-02
192GO:0019915: lipid storage3.09E-02
193GO:0009269: response to desiccation3.09E-02
194GO:0031408: oxylipin biosynthetic process3.09E-02
195GO:0016998: cell wall macromolecule catabolic process3.09E-02
196GO:0009826: unidimensional cell growth3.15E-02
197GO:0051603: proteolysis involved in cellular protein catabolic process3.17E-02
198GO:0030245: cellulose catabolic process3.29E-02
199GO:0071215: cellular response to abscisic acid stimulus3.50E-02
200GO:0071369: cellular response to ethylene stimulus3.50E-02
201GO:0043086: negative regulation of catalytic activity3.62E-02
202GO:0006284: base-excision repair3.72E-02
203GO:0010089: xylem development3.72E-02
204GO:0048367: shoot system development3.74E-02
205GO:0006351: transcription, DNA-templated3.79E-02
206GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.94E-02
207GO:0008284: positive regulation of cell proliferation3.94E-02
208GO:0048366: leaf development4.04E-02
209GO:0000226: microtubule cytoskeleton organization4.16E-02
210GO:0009958: positive gravitropism4.39E-02
211GO:0048868: pollen tube development4.39E-02
212GO:0010268: brassinosteroid homeostasis4.39E-02
213GO:0010200: response to chitin4.49E-02
214GO:0055114: oxidation-reduction process4.53E-02
215GO:0009742: brassinosteroid mediated signaling pathway4.61E-02
216GO:0042752: regulation of circadian rhythm4.62E-02
217GO:0010183: pollen tube guidance4.85E-02
218GO:0009749: response to glucose4.85E-02
219GO:0008654: phospholipid biosynthetic process4.85E-02
RankGO TermAdjusted P value
1GO:0052631: sphingolipid delta-8 desaturase activity0.00E+00
2GO:0010303: limit dextrinase activity0.00E+00
3GO:0051060: pullulanase activity0.00E+00
4GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.45E-10
5GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.45E-10
6GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.45E-10
7GO:0009922: fatty acid elongase activity2.22E-08
8GO:0070330: aromatase activity1.17E-07
9GO:0018685: alkane 1-monooxygenase activity3.57E-06
10GO:0052747: sinapyl alcohol dehydrogenase activity2.69E-05
11GO:0003883: CTP synthase activity7.78E-05
12GO:0045551: cinnamyl-alcohol dehydrogenase activity1.34E-04
13GO:0004556: alpha-amylase activity2.93E-04
14GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.93E-04
15GO:0016746: transferase activity, transferring acyl groups4.06E-04
16GO:0050521: alpha-glucan, water dikinase activity4.92E-04
17GO:0004105: choline-phosphate cytidylyltransferase activity4.92E-04
18GO:0000828: inositol hexakisphosphate kinase activity4.92E-04
19GO:0008909: isochorismate synthase activity4.92E-04
20GO:0005534: galactose binding4.92E-04
21GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity4.92E-04
22GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity4.92E-04
23GO:0015245: fatty acid transporter activity4.92E-04
24GO:0031957: very long-chain fatty acid-CoA ligase activity4.92E-04
25GO:0033857: diphosphoinositol-pentakisphosphate kinase activity4.92E-04
26GO:0008809: carnitine racemase activity4.92E-04
27GO:0000829: inositol heptakisphosphate kinase activity4.92E-04
28GO:0043565: sequence-specific DNA binding5.31E-04
29GO:1901677: phosphate transmembrane transporter activity1.06E-03
30GO:0016629: 12-oxophytodienoate reductase activity1.06E-03
31GO:0015117: thiosulfate transmembrane transporter activity1.06E-03
32GO:0001047: core promoter binding1.06E-03
33GO:0017040: ceramidase activity1.06E-03
34GO:0047274: galactinol-sucrose galactosyltransferase activity1.73E-03
35GO:0005310: dicarboxylic acid transmembrane transporter activity1.73E-03
36GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.73E-03
37GO:0050734: hydroxycinnamoyltransferase activity1.73E-03
38GO:0017108: 5'-flap endonuclease activity1.73E-03
39GO:0015141: succinate transmembrane transporter activity1.73E-03
40GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.73E-03
41GO:0005457: GDP-fucose transmembrane transporter activity1.73E-03
42GO:0004324: ferredoxin-NADP+ reductase activity1.73E-03
43GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.13E-03
44GO:0008266: poly(U) RNA binding2.13E-03
45GO:0015131: oxaloacetate transmembrane transporter activity2.51E-03
46GO:0005460: UDP-glucose transmembrane transporter activity2.51E-03
47GO:0052656: L-isoleucine transaminase activity2.51E-03
48GO:0004165: dodecenoyl-CoA delta-isomerase activity2.51E-03
49GO:0052654: L-leucine transaminase activity2.51E-03
50GO:0052655: L-valine transaminase activity2.51E-03
51GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.22E-03
52GO:0004084: branched-chain-amino-acid transaminase activity3.38E-03
53GO:0050378: UDP-glucuronate 4-epimerase activity3.38E-03
54GO:0008878: glucose-1-phosphate adenylyltransferase activity3.38E-03
55GO:0019104: DNA N-glycosylase activity3.38E-03
56GO:0008289: lipid binding3.48E-03
57GO:0005459: UDP-galactose transmembrane transporter activity4.33E-03
58GO:0003959: NADPH dehydrogenase activity4.33E-03
59GO:0019139: cytokinin dehydrogenase activity4.33E-03
60GO:0080122: AMP transmembrane transporter activity4.33E-03
61GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.33E-03
62GO:0010294: abscisic acid glucosyltransferase activity4.33E-03
63GO:0004029: aldehyde dehydrogenase (NAD) activity5.37E-03
64GO:0004130: cytochrome-c peroxidase activity5.37E-03
65GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.37E-03
66GO:0102391: decanoate--CoA ligase activity6.48E-03
67GO:0004602: glutathione peroxidase activity6.48E-03
68GO:0005347: ATP transmembrane transporter activity6.48E-03
69GO:0015217: ADP transmembrane transporter activity6.48E-03
70GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.51E-03
71GO:0045330: aspartyl esterase activity6.90E-03
72GO:0016621: cinnamoyl-CoA reductase activity7.66E-03
73GO:0009881: photoreceptor activity7.66E-03
74GO:0015140: malate transmembrane transporter activity7.66E-03
75GO:0004467: long-chain fatty acid-CoA ligase activity7.66E-03
76GO:0030599: pectinesterase activity8.81E-03
77GO:0016791: phosphatase activity8.84E-03
78GO:0015288: porin activity8.92E-03
79GO:0016209: antioxidant activity8.92E-03
80GO:0016788: hydrolase activity, acting on ester bonds9.04E-03
81GO:0016413: O-acetyltransferase activity9.98E-03
82GO:0009672: auxin:proton symporter activity1.31E-02
83GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.31E-02
84GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.32E-02
85GO:0052689: carboxylic ester hydrolase activity1.42E-02
86GO:0015020: glucuronosyltransferase activity1.46E-02
87GO:0004864: protein phosphatase inhibitor activity1.46E-02
88GO:0005545: 1-phosphatidylinositol binding1.46E-02
89GO:0046910: pectinesterase inhibitor activity1.75E-02
90GO:0000976: transcription regulatory region sequence-specific DNA binding1.79E-02
91GO:0015116: sulfate transmembrane transporter activity1.79E-02
92GO:0004722: protein serine/threonine phosphatase activity1.84E-02
93GO:0015114: phosphate ion transmembrane transporter activity1.96E-02
94GO:0005388: calcium-transporting ATPase activity1.96E-02
95GO:0004022: alcohol dehydrogenase (NAD) activity1.96E-02
96GO:0010329: auxin efflux transmembrane transporter activity1.96E-02
97GO:0015266: protein channel activity1.96E-02
98GO:0004089: carbonate dehydratase activity1.96E-02
99GO:0005262: calcium channel activity1.96E-02
100GO:0008083: growth factor activity2.13E-02
101GO:0003700: transcription factor activity, sequence-specific DNA binding2.14E-02
102GO:0008146: sulfotransferase activity2.31E-02
103GO:0004707: MAP kinase activity3.09E-02
104GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.29E-02
105GO:0031625: ubiquitin protein ligase binding3.39E-02
106GO:0030570: pectate lyase activity3.50E-02
107GO:0008810: cellulase activity3.50E-02
108GO:0016760: cellulose synthase (UDP-forming) activity3.50E-02
109GO:0003727: single-stranded RNA binding3.72E-02
110GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.74E-02
111GO:0080043: quercetin 3-O-glucosyltransferase activity3.98E-02
112GO:0080044: quercetin 7-O-glucosyltransferase activity3.98E-02
113GO:0016874: ligase activity4.10E-02
114GO:0003713: transcription coactivator activity4.39E-02
115GO:0030276: clathrin binding4.39E-02
116GO:0061630: ubiquitin protein ligase activity4.58E-02
117GO:0050662: coenzyme binding4.62E-02
118GO:0010181: FMN binding4.62E-02
119GO:0004872: receptor activity4.85E-02
RankGO TermAdjusted P value
1GO:0033557: Slx1-Slx4 complex0.00E+00
2GO:0034426: etioplast membrane0.00E+00
3GO:0031357: integral component of chloroplast inner membrane1.06E-05
4GO:0009505: plant-type cell wall5.60E-05
5GO:0046658: anchored component of plasma membrane7.19E-05
6GO:0016020: membrane7.73E-04
7GO:0009941: chloroplast envelope9.21E-04
8GO:0005618: cell wall1.21E-03
9GO:0031225: anchored component of membrane1.55E-03
10GO:0009897: external side of plasma membrane1.73E-03
11GO:0005886: plasma membrane2.92E-03
12GO:0009527: plastid outer membrane3.38E-03
13GO:0005783: endoplasmic reticulum3.56E-03
14GO:0016021: integral component of membrane3.58E-03
15GO:0005615: extracellular space5.36E-03
16GO:0000793: condensed chromosome5.37E-03
17GO:0005798: Golgi-associated vesicle5.37E-03
18GO:0005768: endosome6.48E-03
19GO:0000794: condensed nuclear chromosome7.66E-03
20GO:0000145: exocyst7.79E-03
21GO:0031305: integral component of mitochondrial inner membrane8.92E-03
22GO:0046930: pore complex1.03E-02
23GO:0045298: tubulin complex1.17E-02
24GO:0010287: plastoglobule1.18E-02
25GO:0009570: chloroplast stroma1.30E-02
26GO:0005802: trans-Golgi network1.41E-02
27GO:0009508: plastid chromosome1.96E-02
28GO:0005789: endoplasmic reticulum membrane1.99E-02
29GO:0009579: thylakoid2.36E-02
30GO:0009534: chloroplast thylakoid2.40E-02
31GO:0005769: early endosome2.50E-02
32GO:0005576: extracellular region2.78E-02
33GO:0005905: clathrin-coated pit3.09E-02
34GO:0005744: mitochondrial inner membrane presequence translocase complex3.72E-02
35GO:0005794: Golgi apparatus3.93E-02
36GO:0030136: clathrin-coated vesicle3.94E-02
37GO:0009535: chloroplast thylakoid membrane4.32E-02
38GO:0005622: intracellular4.54E-02
<
Gene type



Gene DE type