co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G24390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000025: maltose catabolic process	0.00E+00
2	GO:0005980: glycogen catabolic process	0.00E+00
3	GO:0090627: plant epidermal cell differentiation	0.00E+00
4	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
5	GO:0030155: regulation of cell adhesion	0.00E+00
6	GO:0032958: inositol phosphate biosynthetic process	4.45E-05
7	GO:0010028: xanthophyll cycle	4.45E-05
8	GO:0000023: maltose metabolic process	4.45E-05
9	GO:0005983: starch catabolic process	5.40E-05
10	GO:0032527: protein exit from endoplasmic reticulum	1.10E-04
11	GO:0051170: nuclear import	1.10E-04
12	GO:0005976: polysaccharide metabolic process	1.10E-04
13	GO:0090342: regulation of cell aging	1.10E-04
14	GO:0016122: xanthophyll metabolic process	1.10E-04
15	GO:0071712: ER-associated misfolded protein catabolic process	1.10E-04
16	GO:0009414: response to water deprivation	1.38E-04
17	GO:0032940: secretion by cell	1.89E-04
18	GO:0048281: inflorescence morphogenesis	1.89E-04
19	GO:0010148: transpiration	2.78E-04
20	GO:0006020: inositol metabolic process	2.78E-04
21	GO:0010601: positive regulation of auxin biosynthetic process	2.78E-04
22	GO:0005975: carbohydrate metabolic process	3.26E-04
23	GO:0015994: chlorophyll metabolic process	3.73E-04
24	GO:0010600: regulation of auxin biosynthetic process	3.73E-04
25	GO:0051205: protein insertion into membrane	3.73E-04
26	GO:0015846: polyamine transport	3.73E-04
27	GO:0010021: amylopectin biosynthetic process	3.73E-04
28	GO:0045038: protein import into chloroplast thylakoid membrane	4.75E-04
29	GO:0009913: epidermal cell differentiation	5.82E-04
30	GO:0009631: cold acclimation	5.96E-04
31	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	6.94E-04
32	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	6.94E-04
33	GO:0048437: floral organ development	8.11E-04
34	GO:0070370: cellular heat acclimation	8.11E-04
35	GO:0010103: stomatal complex morphogenesis	8.11E-04
36	GO:0010161: red light signaling pathway	8.11E-04
37	GO:0010928: regulation of auxin mediated signaling pathway	9.32E-04
38	GO:0005978: glycogen biosynthetic process	9.32E-04
39	GO:0006353: DNA-templated transcription, termination	9.32E-04
40	GO:0030091: protein repair	9.32E-04
41	GO:0009704: de-etiolation	9.32E-04
42	GO:0006629: lipid metabolic process	1.01E-03
43	GO:0009827: plant-type cell wall modification	1.06E-03
44	GO:0001558: regulation of cell growth	1.06E-03
45	GO:0006783: heme biosynthetic process	1.19E-03
46	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.32E-03
47	GO:0005982: starch metabolic process	1.32E-03
48	GO:0006782: protoporphyrinogen IX biosynthetic process	1.47E-03
49	GO:0006006: glucose metabolic process	1.92E-03
50	GO:0006094: gluconeogenesis	1.92E-03
51	GO:0009266: response to temperature stimulus	2.09E-03
52	GO:0009944: polarity specification of adaxial/abaxial axis	2.60E-03
53	GO:0007017: microtubule-based process	2.77E-03
54	GO:0051302: regulation of cell division	2.77E-03
55	GO:0003333: amino acid transmembrane transport	2.96E-03
56	GO:0048511: rhythmic process	2.96E-03
57	GO:0061077: chaperone-mediated protein folding	2.96E-03
58	GO:0010017: red or far-red light signaling pathway	3.14E-03
59	GO:0035428: hexose transmembrane transport	3.14E-03
60	GO:0009686: gibberellin biosynthetic process	3.33E-03
61	GO:0001944: vasculature development	3.33E-03
62	GO:0046323: glucose import	4.14E-03
63	GO:0048825: cotyledon development	4.56E-03
64	GO:0019252: starch biosynthetic process	4.56E-03
65	GO:0009556: microsporogenesis	4.56E-03
66	GO:0030163: protein catabolic process	5.22E-03
67	GO:1901657: glycosyl compound metabolic process	5.22E-03
68	GO:0010027: thylakoid membrane organization	6.15E-03
69	GO:0016126: sterol biosynthetic process	6.15E-03
70	GO:0015995: chlorophyll biosynthetic process	6.89E-03
71	GO:0016042: lipid catabolic process	7.17E-03
72	GO:0009817: defense response to fungus, incompatible interaction	7.39E-03
73	GO:0009409: response to cold	7.42E-03
74	GO:0000160: phosphorelay signal transduction system	7.65E-03
75	GO:0010218: response to far red light	7.91E-03
76	GO:0006631: fatty acid metabolic process	9.83E-03
77	GO:0009640: photomorphogenesis	1.04E-02
78	GO:0010114: response to red light	1.04E-02
79	GO:0009965: leaf morphogenesis	1.13E-02
80	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.19E-02
81	GO:0009664: plant-type cell wall organization	1.22E-02
82	GO:0009585: red, far-red light phototransduction	1.28E-02
83	GO:0006096: glycolytic process	1.45E-02
84	GO:0009740: gibberellic acid mediated signaling pathway	1.58E-02
85	GO:0009553: embryo sac development	1.61E-02
86	GO:0009845: seed germination	2.05E-02
87	GO:0007623: circadian rhythm	2.43E-02
88	GO:0006979: response to oxidative stress	2.68E-02
89	GO:0006355: regulation of transcription, DNA-templated	2.90E-02
90	GO:0006970: response to osmotic stress	3.50E-02
91	GO:0046686: response to cadmium ion	4.14E-02
92	GO:0045892: negative regulation of transcription, DNA-templated	4.45E-02
93	GO:0032259: methylation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
3	GO:0004645: phosphorylase activity	0.00E+00
4	GO:0009899: ent-kaurene synthase activity	0.00E+00
5	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
6	GO:0008184: glycogen phosphorylase activity	0.00E+00
7	GO:0000828: inositol hexakisphosphate kinase activity	4.45E-05
8	GO:0004853: uroporphyrinogen decarboxylase activity	4.45E-05
9	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	4.45E-05
10	GO:0000829: inositol heptakisphosphate kinase activity	4.45E-05
11	GO:0047372: acylglycerol lipase activity	4.59E-05
12	GO:0004565: beta-galactosidase activity	6.27E-05
13	GO:0018708: thiol S-methyltransferase activity	1.10E-04
14	GO:0003844: 1,4-alpha-glucan branching enzyme activity	1.10E-04
15	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.10E-04
16	GO:0016868: intramolecular transferase activity, phosphotransferases	1.10E-04
17	GO:0010297: heteropolysaccharide binding	1.10E-04
18	GO:0043169: cation binding	1.89E-04
19	GO:0015203: polyamine transmembrane transporter activity	2.78E-04
20	GO:0004506: squalene monooxygenase activity	3.73E-04
21	GO:0019199: transmembrane receptor protein kinase activity	3.73E-04
22	GO:0042277: peptide binding	3.73E-04
23	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	3.73E-04
24	GO:0004629: phospholipase C activity	5.82E-04
25	GO:2001070: starch binding	5.82E-04
26	GO:0004332: fructose-bisphosphate aldolase activity	5.82E-04
27	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	6.94E-04
28	GO:0004435: phosphatidylinositol phospholipase C activity	6.94E-04
29	GO:0005337: nucleoside transmembrane transporter activity	9.32E-04
30	GO:0015174: basic amino acid transmembrane transporter activity	1.32E-03
31	GO:0044183: protein binding involved in protein folding	1.61E-03
32	GO:0030170: pyridoxal phosphate binding	2.12E-03
33	GO:0004190: aspartic-type endopeptidase activity	2.25E-03
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.94E-03
35	GO:0022891: substrate-specific transmembrane transporter activity	3.33E-03
36	GO:0005355: glucose transmembrane transporter activity	4.35E-03
37	GO:0000156: phosphorelay response regulator activity	5.22E-03
38	GO:0005200: structural constituent of cytoskeleton	5.68E-03
39	GO:0102483: scopolin beta-glucosidase activity	6.89E-03
40	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.39E-03
41	GO:0008422: beta-glucosidase activity	9.27E-03
42	GO:0015293: symporter activity	1.13E-02
43	GO:0004252: serine-type endopeptidase activity	2.08E-02
44	GO:0015144: carbohydrate transmembrane transporter activity	2.20E-02
45	GO:0015297: antiporter activity	2.35E-02
46	GO:0005351: sugar:proton symporter activity	2.39E-02
47	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.73E-02
48	GO:0008168: methyltransferase activity	3.23E-02
49	GO:0000287: magnesium ion binding	3.27E-02
50	GO:0016788: hydrolase activity, acting on ester bonds	3.36E-02
51	GO:0050660: flavin adenine dinucleotide binding	3.68E-02
52	GO:0003677: DNA binding	3.73E-02
53	GO:0043565: sequence-specific DNA binding	3.95E-02
54	GO:0052689: carboxylic ester hydrolase activity	4.15E-02
55	GO:0004871: signal transducer activity	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0009501: amyloplast	1.59E-05
2	GO:0036513: Derlin-1 retrotranslocation complex	2.78E-04
3	GO:0009570: chloroplast stroma	1.12E-03
4	GO:0045298: tubulin complex	1.19E-03
5	GO:0030095: chloroplast photosystem II	2.09E-03
6	GO:0009534: chloroplast thylakoid	2.63E-03
7	GO:0005773: vacuole	2.96E-03
8	GO:0031977: thylakoid lumen	9.83E-03
9	GO:0009507: chloroplast	1.18E-02
10	GO:0031966: mitochondrial membrane	1.22E-02
11	GO:0009543: chloroplast thylakoid lumen	1.93E-02
12	GO:0005623: cell	1.97E-02
13	GO:0005829: cytosol	3.18E-02
14	GO:0009536: plastid	3.27E-02
15	GO:0005874: microtubule	3.78E-02
16	GO:0005576: extracellular region	4.65E-02