co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G24160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
2	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
3	GO:0034775: glutathione transmembrane transport	0.00E+00
4	GO:0006468: protein phosphorylation	4.87E-05
5	GO:0009611: response to wounding	6.06E-05
6	GO:0009865: pollen tube adhesion	1.10E-04
7	GO:0006680: glucosylceramide catabolic process	1.10E-04
8	GO:0090421: embryonic meristem initiation	1.10E-04
9	GO:0046938: phytochelatin biosynthetic process	1.10E-04
10	GO:0052544: defense response by callose deposition in cell wall	1.73E-04
11	GO:0008616: queuosine biosynthetic process	2.57E-04
12	GO:0031407: oxylipin metabolic process	2.57E-04
13	GO:0007000: nucleolus organization	2.57E-04
14	GO:0006898: receptor-mediated endocytosis	2.57E-04
15	GO:0046786: viral replication complex formation and maintenance	4.25E-04
16	GO:0051211: anisotropic cell growth	4.25E-04
17	GO:0042344: indole glucosinolate catabolic process	4.25E-04
18	GO:0000280: nuclear division	4.25E-04
19	GO:0044210: 'de novo' CTP biosynthetic process	4.25E-04
20	GO:0035556: intracellular signal transduction	4.25E-04
21	GO:0016045: detection of bacterium	4.25E-04
22	GO:0010359: regulation of anion channel activity	4.25E-04
23	GO:0090630: activation of GTPase activity	4.25E-04
24	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	4.25E-04
25	GO:0031408: oxylipin biosynthetic process	4.43E-04
26	GO:0010200: response to chitin	4.81E-04
27	GO:0015700: arsenite transport	6.10E-04
28	GO:0010371: regulation of gibberellin biosynthetic process	6.10E-04
29	GO:1902347: response to strigolactone	8.10E-04
30	GO:0045727: positive regulation of translation	8.10E-04
31	GO:0006873: cellular ion homeostasis	1.02E-03
32	GO:0032957: inositol trisphosphate metabolic process	1.02E-03
33	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.02E-03
34	GO:0006751: glutathione catabolic process	1.25E-03
35	GO:2000033: regulation of seed dormancy process	1.49E-03
36	GO:0016049: cell growth	1.54E-03
37	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.75E-03
38	GO:0006955: immune response	1.75E-03
39	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	2.03E-03
40	GO:0009880: embryonic pattern specification	2.32E-03
41	GO:0001708: cell fate specification	2.62E-03
42	GO:0046685: response to arsenic-containing substance	2.62E-03
43	GO:0007346: regulation of mitotic cell cycle	2.93E-03
44	GO:0043067: regulation of programmed cell death	2.93E-03
45	GO:0010018: far-red light signaling pathway	2.93E-03
46	GO:0010629: negative regulation of gene expression	3.25E-03
47	GO:0019538: protein metabolic process	3.25E-03
48	GO:0030148: sphingolipid biosynthetic process	3.59E-03
49	GO:0050826: response to freezing	4.30E-03
50	GO:0018107: peptidyl-threonine phosphorylation	4.30E-03
51	GO:0009969: xyloglucan biosynthetic process	5.04E-03
52	GO:0018105: peptidyl-serine phosphorylation	5.13E-03
53	GO:0042753: positive regulation of circadian rhythm	5.44E-03
54	GO:0000398: mRNA splicing, via spliceosome	5.74E-03
55	GO:0010187: negative regulation of seed germination	5.84E-03
56	GO:2000377: regulation of reactive oxygen species metabolic process	5.84E-03
57	GO:0009863: salicylic acid mediated signaling pathway	5.84E-03
58	GO:0009695: jasmonic acid biosynthetic process	6.25E-03
59	GO:0043622: cortical microtubule organization	6.25E-03
60	GO:0051321: meiotic cell cycle	6.67E-03
61	GO:0080092: regulation of pollen tube growth	7.11E-03
62	GO:0001944: vasculature development	7.55E-03
63	GO:0010584: pollen exine formation	8.00E-03
64	GO:0048443: stamen development	8.00E-03
65	GO:0006355: regulation of transcription, DNA-templated	8.23E-03
66	GO:0048868: pollen tube development	9.41E-03
67	GO:0009960: endosperm development	9.41E-03
68	GO:0009739: response to gibberellin	9.62E-03
69	GO:0006470: protein dephosphorylation	9.83E-03
70	GO:0010468: regulation of gene expression	1.03E-02
71	GO:0010183: pollen tube guidance	1.04E-02
72	GO:0010193: response to ozone	1.09E-02
73	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.09E-02
74	GO:0009639: response to red or far red light	1.25E-02
75	GO:0019760: glucosinolate metabolic process	1.25E-02
76	GO:0000910: cytokinesis	1.36E-02
77	GO:0010029: regulation of seed germination	1.47E-02
78	GO:0010411: xyloglucan metabolic process	1.59E-02
79	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.71E-02
80	GO:0007165: signal transduction	1.72E-02
81	GO:0046777: protein autophosphorylation	1.77E-02
82	GO:0048767: root hair elongation	1.77E-02
83	GO:0006811: ion transport	1.83E-02
84	GO:0009867: jasmonic acid mediated signaling pathway	2.02E-02
85	GO:0045087: innate immune response	2.02E-02
86	GO:0016310: phosphorylation	2.20E-02
87	GO:0006631: fatty acid metabolic process	2.29E-02
88	GO:0006979: response to oxidative stress	2.34E-02
89	GO:0009751: response to salicylic acid	2.41E-02
90	GO:0051707: response to other organism	2.42E-02
91	GO:0009408: response to heat	2.45E-02
92	GO:0006952: defense response	2.61E-02
93	GO:0009753: response to jasmonic acid	2.63E-02
94	GO:0000165: MAPK cascade	2.77E-02
95	GO:0009846: pollen germination	2.85E-02
96	GO:0042538: hyperosmotic salinity response	2.85E-02
97	GO:0009585: red, far-red light phototransduction	2.99E-02
98	GO:0009651: response to salt stress	3.48E-02
99	GO:0009620: response to fungus	3.61E-02
100	GO:0009740: gibberellic acid mediated signaling pathway	3.69E-02
101	GO:0045893: positive regulation of transcription, DNA-templated	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0046790: virion binding	0.00E+00
3	GO:0004698: calcium-dependent protein kinase C activity	0.00E+00
4	GO:0017048: Rho GTPase binding	0.00E+00
5	GO:0016629: 12-oxophytodienoate reductase activity	6.25E-07
6	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.58E-06
7	GO:0016301: kinase activity	1.64E-05
8	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.76E-05
9	GO:0004348: glucosylceramidase activity	1.10E-04
10	GO:0071992: phytochelatin transmembrane transporter activity	1.10E-04
11	GO:0046870: cadmium ion binding	1.10E-04
12	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.10E-04
13	GO:0005524: ATP binding	1.35E-04
14	GO:0004674: protein serine/threonine kinase activity	1.91E-04
15	GO:0017022: myosin binding	2.57E-04
16	GO:0004103: choline kinase activity	2.57E-04
17	GO:0008479: queuine tRNA-ribosyltransferase activity	2.57E-04
18	GO:0003840: gamma-glutamyltransferase activity	4.25E-04
19	GO:0004758: serine C-palmitoyltransferase activity	4.25E-04
20	GO:0036374: glutathione hydrolase activity	4.25E-04
21	GO:0004383: guanylate cyclase activity	4.25E-04
22	GO:0047325: inositol tetrakisphosphate 1-kinase activity	4.25E-04
23	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	4.25E-04
24	GO:0048487: beta-tubulin binding	6.10E-04
25	GO:0003883: CTP synthase activity	6.10E-04
26	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	6.10E-04
27	GO:0001653: peptide receptor activity	6.10E-04
28	GO:0033843: xyloglucan 6-xylosyltransferase activity	6.10E-04
29	GO:0010181: FMN binding	7.69E-04
30	GO:0005096: GTPase activator activity	1.69E-03
31	GO:0004143: diacylglycerol kinase activity	1.75E-03
32	GO:0008308: voltage-gated anion channel activity	2.32E-03
33	GO:0000989: transcription factor activity, transcription factor binding	2.62E-03
34	GO:0004722: protein serine/threonine phosphatase activity	3.94E-03
35	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.66E-03
36	GO:0017025: TBP-class protein binding	5.04E-03
37	GO:0005515: protein binding	5.06E-03
38	GO:0044212: transcription regulatory region DNA binding	5.69E-03
39	GO:0004707: MAP kinase activity	6.67E-03
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.01E-03
41	GO:0004672: protein kinase activity	1.02E-02
42	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.30E-02
43	GO:0043531: ADP binding	1.46E-02
44	GO:0004683: calmodulin-dependent protein kinase activity	1.59E-02
45	GO:0005516: calmodulin binding	1.59E-02
46	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.83E-02
47	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.02E-02
48	GO:0035091: phosphatidylinositol binding	2.56E-02
49	GO:0008234: cysteine-type peptidase activity	3.22E-02
50	GO:0046872: metal ion binding	3.28E-02
51	GO:0004842: ubiquitin-protein transferase activity	3.46E-02
52	GO:0016758: transferase activity, transferring hexosyl groups	4.43E-02
53	GO:0030170: pyridoxal phosphate binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0070382: exocytic vesicle	1.10E-04
2	GO:0030133: transport vesicle	2.57E-04
3	GO:0045177: apical part of cell	6.10E-04
4	GO:0005634: nucleus	1.35E-03
5	GO:0005938: cell cortex	4.30E-03
6	GO:0005737: cytoplasm	1.12E-02
7	GO:0046658: anchored component of plasma membrane	1.14E-02
8	GO:0005622: intracellular	1.96E-02
9	GO:0005768: endosome	2.03E-02
10	GO:0090406: pollen tube	2.42E-02
11	GO:0005635: nuclear envelope	3.14E-02
12	GO:0005681: spliceosomal complex	3.37E-02
13	GO:0016607: nuclear speck	3.45E-02
14	GO:0010008: endosome membrane	3.45E-02
15	GO:0005654: nucleoplasm	4.43E-02
16	GO:0009543: chloroplast thylakoid lumen	4.51E-02