co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G23870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0090627: plant epidermal cell differentiation	0.00E+00
3	GO:0005980: glycogen catabolic process	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0015717: triose phosphate transport	0.00E+00
7	GO:1905177: tracheary element differentiation	0.00E+00
8	GO:0071474: cellular hyperosmotic response	0.00E+00
9	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
10	GO:0002184: cytoplasmic translational termination	0.00E+00
11	GO:0030155: regulation of cell adhesion	0.00E+00
12	GO:0000025: maltose catabolic process	0.00E+00
13	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	4.81E-05
14	GO:0009773: photosynthetic electron transport in photosystem I	5.85E-05
15	GO:0005983: starch catabolic process	7.26E-05
16	GO:0010021: amylopectin biosynthetic process	8.50E-05
17	GO:0015979: photosynthesis	9.17E-05
18	GO:0006461: protein complex assembly	1.32E-04
19	GO:0071902: positive regulation of protein serine/threonine kinase activity	3.73E-04
20	GO:0032958: inositol phosphate biosynthetic process	3.73E-04
21	GO:0080093: regulation of photorespiration	3.73E-04
22	GO:0031998: regulation of fatty acid beta-oxidation	3.73E-04
23	GO:0010028: xanthophyll cycle	3.73E-04
24	GO:0000023: maltose metabolic process	3.73E-04
25	GO:0006431: methionyl-tRNA aminoacylation	3.73E-04
26	GO:0005978: glycogen biosynthetic process	4.18E-04
27	GO:0032544: plastid translation	5.11E-04
28	GO:0019252: starch biosynthetic process	5.38E-04
29	GO:0005982: starch metabolic process	7.24E-04
30	GO:0032527: protein exit from endoplasmic reticulum	8.10E-04
31	GO:0005976: polysaccharide metabolic process	8.10E-04
32	GO:0051170: nuclear import	8.10E-04
33	GO:1901959: positive regulation of cutin biosynthetic process	8.10E-04
34	GO:0031648: protein destabilization	8.10E-04
35	GO:0016122: xanthophyll metabolic process	8.10E-04
36	GO:0030388: fructose 1,6-bisphosphate metabolic process	8.10E-04
37	GO:0071712: ER-associated misfolded protein catabolic process	8.10E-04
38	GO:0051262: protein tetramerization	8.10E-04
39	GO:0006094: gluconeogenesis	1.25E-03
40	GO:0009817: defense response to fungus, incompatible interaction	1.30E-03
41	GO:0010506: regulation of autophagy	1.31E-03
42	GO:0006000: fructose metabolic process	1.31E-03
43	GO:0032940: secretion by cell	1.31E-03
44	GO:0006518: peptide metabolic process	1.31E-03
45	GO:0071230: cellular response to amino acid stimulus	1.31E-03
46	GO:0010623: programmed cell death involved in cell development	1.31E-03
47	GO:0080055: low-affinity nitrate transport	1.31E-03
48	GO:0035436: triose phosphate transmembrane transport	1.31E-03
49	GO:1904278: positive regulation of wax biosynthetic process	1.31E-03
50	GO:0031929: TOR signaling	1.31E-03
51	GO:0016050: vesicle organization	1.31E-03
52	GO:0048281: inflorescence morphogenesis	1.31E-03
53	GO:0009266: response to temperature stimulus	1.41E-03
54	GO:0010218: response to far red light	1.47E-03
55	GO:0010025: wax biosynthetic process	1.76E-03
56	GO:0030100: regulation of endocytosis	1.89E-03
57	GO:0010731: protein glutathionylation	1.89E-03
58	GO:1901332: negative regulation of lateral root development	1.89E-03
59	GO:0010148: transpiration	1.89E-03
60	GO:1902358: sulfate transmembrane transport	1.89E-03
61	GO:0006020: inositol metabolic process	1.89E-03
62	GO:1901000: regulation of response to salt stress	1.89E-03
63	GO:0009735: response to cytokinin	2.05E-03
64	GO:0061077: chaperone-mediated protein folding	2.37E-03
65	GO:0007623: circadian rhythm	2.38E-03
66	GO:2000122: negative regulation of stomatal complex development	2.54E-03
67	GO:0015846: polyamine transport	2.54E-03
68	GO:0010600: regulation of auxin biosynthetic process	2.54E-03
69	GO:0045723: positive regulation of fatty acid biosynthetic process	2.54E-03
70	GO:0006552: leucine catabolic process	2.54E-03
71	GO:0010508: positive regulation of autophagy	2.54E-03
72	GO:0015713: phosphoglycerate transport	2.54E-03
73	GO:0010037: response to carbon dioxide	2.54E-03
74	GO:0006808: regulation of nitrogen utilization	2.54E-03
75	GO:0015976: carbon utilization	2.54E-03
76	GO:0010023: proanthocyanidin biosynthetic process	2.54E-03
77	GO:0051322: anaphase	2.54E-03
78	GO:0009765: photosynthesis, light harvesting	2.54E-03
79	GO:0015994: chlorophyll metabolic process	2.54E-03
80	GO:0010017: red or far-red light signaling pathway	2.59E-03
81	GO:0006284: base-excision repair	3.07E-03
82	GO:0006097: glyoxylate cycle	3.25E-03
83	GO:0035434: copper ion transmembrane transport	3.25E-03
84	GO:0048578: positive regulation of long-day photoperiodism, flowering	3.25E-03
85	GO:0009267: cellular response to starvation	4.02E-03
86	GO:0009643: photosynthetic acclimation	4.02E-03
87	GO:0000470: maturation of LSU-rRNA	4.02E-03
88	GO:0009913: epidermal cell differentiation	4.02E-03
89	GO:0009658: chloroplast organization	4.65E-03
90	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.85E-03
91	GO:0006458: 'de novo' protein folding	4.85E-03
92	GO:0042026: protein refolding	4.85E-03
93	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	4.85E-03
94	GO:0009955: adaxial/abaxial pattern specification	4.85E-03
95	GO:0071470: cellular response to osmotic stress	4.85E-03
96	GO:0030163: protein catabolic process	5.46E-03
97	GO:0070370: cellular heat acclimation	5.73E-03
98	GO:0009645: response to low light intensity stimulus	5.73E-03
99	GO:0008272: sulfate transport	5.73E-03
100	GO:0022904: respiratory electron transport chain	5.73E-03
101	GO:0030307: positive regulation of cell growth	5.73E-03
102	GO:0010103: stomatal complex morphogenesis	5.73E-03
103	GO:0010161: red light signaling pathway	5.73E-03
104	GO:0030497: fatty acid elongation	5.73E-03
105	GO:0006310: DNA recombination	5.81E-03
106	GO:0009409: response to cold	6.31E-03
107	GO:0010928: regulation of auxin mediated signaling pathway	6.65E-03
108	GO:0030091: protein repair	6.65E-03
109	GO:0009704: de-etiolation	6.65E-03
110	GO:0006353: DNA-templated transcription, termination	6.65E-03
111	GO:0010027: thylakoid membrane organization	6.94E-03
112	GO:0009657: plastid organization	7.64E-03
113	GO:0006002: fructose 6-phosphate metabolic process	7.64E-03
114	GO:0001558: regulation of cell growth	7.64E-03
115	GO:0015995: chlorophyll biosynthetic process	8.18E-03
116	GO:0010206: photosystem II repair	8.66E-03
117	GO:0006783: heme biosynthetic process	8.66E-03
118	GO:0051865: protein autoubiquitination	8.66E-03
119	GO:0000160: phosphorelay signal transduction system	9.54E-03
120	GO:0042761: very long-chain fatty acid biosynthetic process	9.74E-03
121	GO:0006869: lipid transport	9.75E-03
122	GO:0009631: cold acclimation	1.05E-02
123	GO:0006782: protoporphyrinogen IX biosynthetic process	1.09E-02
124	GO:0048829: root cap development	1.09E-02
125	GO:0009637: response to blue light	1.15E-02
126	GO:0006281: DNA repair	1.17E-02
127	GO:0006415: translational termination	1.20E-02
128	GO:0009750: response to fructose	1.20E-02
129	GO:0010015: root morphogenesis	1.20E-02
130	GO:0000038: very long-chain fatty acid metabolic process	1.20E-02
131	GO:0071365: cellular response to auxin stimulus	1.33E-02
132	GO:0008361: regulation of cell size	1.33E-02
133	GO:0008152: metabolic process	1.35E-02
134	GO:0006631: fatty acid metabolic process	1.37E-02
135	GO:0010628: positive regulation of gene expression	1.45E-02
136	GO:0010102: lateral root morphogenesis	1.45E-02
137	GO:0006108: malate metabolic process	1.45E-02
138	GO:0006006: glucose metabolic process	1.45E-02
139	GO:0009718: anthocyanin-containing compound biosynthetic process	1.45E-02
140	GO:0005986: sucrose biosynthetic process	1.45E-02
141	GO:0009640: photomorphogenesis	1.49E-02
142	GO:0010114: response to red light	1.49E-02
143	GO:0009887: animal organ morphogenesis	1.58E-02
144	GO:0010143: cutin biosynthetic process	1.58E-02
145	GO:0009644: response to high light intensity	1.61E-02
146	GO:0055114: oxidation-reduction process	1.78E-02
147	GO:0009944: polarity specification of adaxial/abaxial axis	1.99E-02
148	GO:0006289: nucleotide-excision repair	1.99E-02
149	GO:0009585: red, far-red light phototransduction	2.01E-02
150	GO:0006418: tRNA aminoacylation for protein translation	2.14E-02
151	GO:0009768: photosynthesis, light harvesting in photosystem I	2.14E-02
152	GO:0007017: microtubule-based process	2.14E-02
153	GO:0006825: copper ion transport	2.14E-02
154	GO:0051302: regulation of cell division	2.14E-02
155	GO:0003333: amino acid transmembrane transport	2.29E-02
156	GO:0051260: protein homooligomerization	2.29E-02
157	GO:0048511: rhythmic process	2.29E-02
158	GO:0019915: lipid storage	2.29E-02
159	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.44E-02
160	GO:0035428: hexose transmembrane transport	2.44E-02
161	GO:0019748: secondary metabolic process	2.44E-02
162	GO:0030245: cellulose catabolic process	2.44E-02
163	GO:0080167: response to karrikin	2.56E-02
164	GO:0009686: gibberellin biosynthetic process	2.60E-02
165	GO:0001944: vasculature development	2.60E-02
166	GO:0009414: response to water deprivation	2.71E-02
167	GO:0010089: xylem development	2.76E-02
168	GO:0006979: response to oxidative stress	2.85E-02
169	GO:0042335: cuticle development	3.08E-02
170	GO:0045454: cell redox homeostasis	3.20E-02
171	GO:0046323: glucose import	3.25E-02
172	GO:0042752: regulation of circadian rhythm	3.42E-02
173	GO:0009646: response to absence of light	3.42E-02
174	GO:0048825: cotyledon development	3.60E-02
175	GO:0000302: response to reactive oxygen species	3.78E-02
176	GO:0048235: pollen sperm cell differentiation	3.96E-02
177	GO:0071281: cellular response to iron ion	4.14E-02
178	GO:1901657: glycosyl compound metabolic process	4.14E-02
179	GO:0006629: lipid metabolic process	4.15E-02
180	GO:0006633: fatty acid biosynthetic process	4.49E-02
181	GO:0000910: cytokinesis	4.71E-02
182	GO:0016126: sterol biosynthetic process	4.91E-02
183	GO:0045490: pectin catabolic process	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0004134: 4-alpha-glucanotransferase activity	0.00E+00
3	GO:0004645: phosphorylase activity	0.00E+00
4	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
5	GO:0048039: ubiquinone binding	0.00E+00
6	GO:0009899: ent-kaurene synthase activity	0.00E+00
7	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
8	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
9	GO:0008184: glycogen phosphorylase activity	0.00E+00
10	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
11	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.50E-05
12	GO:2001070: starch binding	1.90E-04
13	GO:0000828: inositol hexakisphosphate kinase activity	3.73E-04
14	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	3.73E-04
15	GO:0004853: uroporphyrinogen decarboxylase activity	3.73E-04
16	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	3.73E-04
17	GO:0004825: methionine-tRNA ligase activity	3.73E-04
18	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	3.73E-04
19	GO:0000829: inositol heptakisphosphate kinase activity	3.73E-04
20	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.73E-04
21	GO:0005227: calcium activated cation channel activity	3.73E-04
22	GO:0048038: quinone binding	5.87E-04
23	GO:0003844: 1,4-alpha-glucan branching enzyme activity	8.10E-04
24	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	8.10E-04
25	GO:0050736: O-malonyltransferase activity	8.10E-04
26	GO:0008967: phosphoglycolate phosphatase activity	8.10E-04
27	GO:0044390: ubiquitin-like protein conjugating enzyme binding	8.10E-04
28	GO:0016868: intramolecular transferase activity, phosphotransferases	8.10E-04
29	GO:0010297: heteropolysaccharide binding	8.10E-04
30	GO:0033201: alpha-1,4-glucan synthase activity	8.10E-04
31	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.10E-04
32	GO:0018708: thiol S-methyltransferase activity	8.10E-04
33	GO:0044183: protein binding involved in protein folding	9.70E-04
34	GO:0047372: acylglycerol lipase activity	9.70E-04
35	GO:0017150: tRNA dihydrouridine synthase activity	1.31E-03
36	GO:0050734: hydroxycinnamoyltransferase activity	1.31E-03
37	GO:0017108: 5'-flap endonuclease activity	1.31E-03
38	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.31E-03
39	GO:0071917: triose-phosphate transmembrane transporter activity	1.31E-03
40	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.31E-03
41	GO:0043169: cation binding	1.31E-03
42	GO:0004373: glycogen (starch) synthase activity	1.31E-03
43	GO:0016149: translation release factor activity, codon specific	1.89E-03
44	GO:0015203: polyamine transmembrane transporter activity	1.89E-03
45	GO:0016851: magnesium chelatase activity	1.89E-03
46	GO:0043023: ribosomal large subunit binding	1.89E-03
47	GO:0009011: starch synthase activity	2.54E-03
48	GO:0004506: squalene monooxygenase activity	2.54E-03
49	GO:0019199: transmembrane receptor protein kinase activity	2.54E-03
50	GO:0008878: glucose-1-phosphate adenylyltransferase activity	2.54E-03
51	GO:0042277: peptide binding	2.54E-03
52	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	2.54E-03
53	GO:0015120: phosphoglycerate transmembrane transporter activity	2.54E-03
54	GO:0019104: DNA N-glycosylase activity	2.54E-03
55	GO:0030570: pectate lyase activity	2.83E-03
56	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	3.25E-03
57	GO:0008725: DNA-3-methyladenine glycosylase activity	3.25E-03
58	GO:0009055: electron carrier activity	3.48E-03
59	GO:0004130: cytochrome-c peroxidase activity	4.02E-03
60	GO:0016615: malate dehydrogenase activity	4.02E-03
61	GO:0004332: fructose-bisphosphate aldolase activity	4.02E-03
62	GO:0004602: glutathione peroxidase activity	4.85E-03
63	GO:0030060: L-malate dehydrogenase activity	4.85E-03
64	GO:0005261: cation channel activity	4.85E-03
65	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.85E-03
66	GO:0000156: phosphorelay response regulator activity	5.46E-03
67	GO:0004033: aldo-keto reductase (NADP) activity	6.65E-03
68	GO:0030674: protein binding, bridging	6.65E-03
69	GO:0005337: nucleoside transmembrane transporter activity	6.65E-03
70	GO:0016209: antioxidant activity	6.65E-03
71	GO:0019843: rRNA binding	7.43E-03
72	GO:0005375: copper ion transmembrane transporter activity	7.64E-03
73	GO:0008271: secondary active sulfate transmembrane transporter activity	7.64E-03
74	GO:0003747: translation release factor activity	8.66E-03
75	GO:0015174: basic amino acid transmembrane transporter activity	9.74E-03
76	GO:0004222: metalloendopeptidase activity	1.00E-02
77	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.33E-02
78	GO:0015116: sulfate transmembrane transporter activity	1.33E-02
79	GO:0004565: beta-galactosidase activity	1.45E-02
80	GO:0004022: alcohol dehydrogenase (NAD) activity	1.45E-02
81	GO:0004089: carbonate dehydratase activity	1.45E-02
82	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.52E-02
83	GO:0051537: 2 iron, 2 sulfur cluster binding	1.61E-02
84	GO:0016491: oxidoreductase activity	1.67E-02
85	GO:0015293: symporter activity	1.68E-02
86	GO:0004190: aspartic-type endopeptidase activity	1.71E-02
87	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.85E-02
88	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.85E-02
89	GO:0031409: pigment binding	1.85E-02
90	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.85E-02
91	GO:0008289: lipid binding	1.92E-02
92	GO:0005528: FK506 binding	1.99E-02
93	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.46E-02
94	GO:0008810: cellulase activity	2.60E-02
95	GO:0022891: substrate-specific transmembrane transporter activity	2.60E-02
96	GO:0004812: aminoacyl-tRNA ligase activity	2.92E-02
97	GO:0015035: protein disulfide oxidoreductase activity	2.95E-02
98	GO:0005249: voltage-gated potassium channel activity	3.08E-02
99	GO:0003713: transcription coactivator activity	3.25E-02
100	GO:0001085: RNA polymerase II transcription factor binding	3.25E-02
101	GO:0004871: signal transducer activity	3.39E-02
102	GO:0005355: glucose transmembrane transporter activity	3.42E-02
103	GO:0016829: lyase activity	3.88E-02
104	GO:0004518: nuclease activity	3.96E-02
105	GO:0004252: serine-type endopeptidase activity	3.98E-02
106	GO:0030170: pyridoxal phosphate binding	3.98E-02
107	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.11E-02
108	GO:0003684: damaged DNA binding	4.33E-02
109	GO:0005200: structural constituent of cytoskeleton	4.52E-02
110	GO:0008237: metallopeptidase activity	4.52E-02
111	GO:0043565: sequence-specific DNA binding	4.55E-02
112	GO:0016597: amino acid binding	4.71E-02
113	GO:0015297: antiporter activity	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0042579: microbody	0.00E+00
3	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
4	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
5	GO:0009507: chloroplast	2.09E-20
6	GO:0009535: chloroplast thylakoid membrane	6.92E-18
7	GO:0009570: chloroplast stroma	7.67E-17
8	GO:0009941: chloroplast envelope	6.23E-16
9	GO:0009534: chloroplast thylakoid	5.96E-15
10	GO:0009579: thylakoid	1.93E-08
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.69E-07
12	GO:0009543: chloroplast thylakoid lumen	3.03E-06
13	GO:0009501: amyloplast	1.36E-05
14	GO:0010287: plastoglobule	3.02E-05
15	GO:0031977: thylakoid lumen	3.48E-05
16	GO:0009295: nucleoid	8.42E-05
17	GO:0009508: plastid chromosome	8.89E-05
18	GO:0030095: chloroplast photosystem II	1.07E-04
19	GO:0009533: chloroplast stromal thylakoid	3.33E-04
20	GO:0030093: chloroplast photosystem I	8.10E-04
21	GO:0043036: starch grain	8.10E-04
22	GO:0010007: magnesium chelatase complex	1.31E-03
23	GO:0031931: TORC1 complex	1.31E-03
24	GO:0036513: Derlin-1 retrotranslocation complex	1.89E-03
25	GO:0008076: voltage-gated potassium channel complex	1.89E-03
26	GO:0030915: Smc5-Smc6 complex	3.25E-03
27	GO:0005798: Golgi-associated vesicle	4.02E-03
28	GO:0009523: photosystem II	4.48E-03
29	GO:0009538: photosystem I reaction center	6.65E-03
30	GO:0031305: integral component of mitochondrial inner membrane	6.65E-03
31	GO:0042644: chloroplast nucleoid	8.66E-03
32	GO:0045298: tubulin complex	8.66E-03
33	GO:0010494: cytoplasmic stress granule	8.66E-03
34	GO:0005740: mitochondrial envelope	1.09E-02
35	GO:0009574: preprophase band	1.45E-02
36	GO:0016020: membrane	1.50E-02
37	GO:0030076: light-harvesting complex	1.71E-02
38	GO:0005769: early endosome	1.85E-02
39	GO:0042651: thylakoid membrane	2.14E-02
40	GO:0009654: photosystem II oxygen evolving complex	2.14E-02
41	GO:0005622: intracellular	2.26E-02
42	GO:0005874: microtubule	2.45E-02
43	GO:0009706: chloroplast inner membrane	2.87E-02
44	GO:0005840: ribosome	3.05E-02
45	GO:0009522: photosystem I	3.42E-02
46	GO:0019898: extrinsic component of membrane	3.60E-02
47	GO:0009536: plastid	3.95E-02
48	GO:0010319: stromule	4.52E-02
49	GO:0048046: apoplast	4.88E-02
50	GO:0000932: P-body	4.91E-02