co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G23710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
2	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
3	GO:0001881: receptor recycling	0.00E+00
4	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
5	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
6	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
7	GO:0046487: glyoxylate metabolic process	0.00E+00
8	GO:0035269: protein O-linked mannosylation	0.00E+00
9	GO:0006412: translation	1.59E-36
10	GO:0042254: ribosome biogenesis	2.73E-23
11	GO:0006511: ubiquitin-dependent protein catabolic process	5.81E-09
12	GO:0009735: response to cytokinin	7.90E-08
13	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	5.18E-06
14	GO:0051603: proteolysis involved in cellular protein catabolic process	4.31E-05
15	GO:0006820: anion transport	4.41E-05
16	GO:0000027: ribosomal large subunit assembly	1.09E-04
17	GO:0043248: proteasome assembly	1.34E-04
18	GO:0009554: megasporogenesis	1.83E-04
19	GO:0009955: adaxial/abaxial pattern specification	1.83E-04
20	GO:0008283: cell proliferation	2.25E-04
21	GO:0042964: thioredoxin reduction	2.99E-04
22	GO:0032365: intracellular lipid transport	2.99E-04
23	GO:1990542: mitochondrial transmembrane transport	2.99E-04
24	GO:1901349: glucosinolate transport	2.99E-04
25	GO:0090449: phloem glucosinolate loading	2.99E-04
26	GO:0015786: UDP-glucose transport	6.55E-04
27	GO:0045905: positive regulation of translational termination	6.55E-04
28	GO:0045901: positive regulation of translational elongation	6.55E-04
29	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	6.55E-04
30	GO:0006452: translational frameshifting	6.55E-04
31	GO:0051788: response to misfolded protein	6.55E-04
32	GO:0006626: protein targeting to mitochondrion	9.19E-04
33	GO:1902626: assembly of large subunit precursor of preribosome	1.06E-03
34	GO:0002181: cytoplasmic translation	1.06E-03
35	GO:0045793: positive regulation of cell size	1.06E-03
36	GO:0015783: GDP-fucose transport	1.06E-03
37	GO:0008333: endosome to lysosome transport	1.06E-03
38	GO:0042744: hydrogen peroxide catabolic process	1.08E-03
39	GO:0009853: photorespiration	1.17E-03
40	GO:0009647: skotomorphogenesis	1.52E-03
41	GO:0006168: adenine salvage	1.52E-03
42	GO:0071786: endoplasmic reticulum tubular network organization	1.52E-03
43	GO:0001676: long-chain fatty acid metabolic process	1.52E-03
44	GO:0032877: positive regulation of DNA endoreduplication	1.52E-03
45	GO:0046836: glycolipid transport	1.52E-03
46	GO:0006166: purine ribonucleoside salvage	1.52E-03
47	GO:0072334: UDP-galactose transmembrane transport	1.52E-03
48	GO:0051781: positive regulation of cell division	2.04E-03
49	GO:0042274: ribosomal small subunit biogenesis	2.04E-03
50	GO:0010363: regulation of plant-type hypersensitive response	2.04E-03
51	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.61E-03
52	GO:0000413: protein peptidyl-prolyl isomerization	2.61E-03
53	GO:0007029: endoplasmic reticulum organization	2.61E-03
54	GO:1902183: regulation of shoot apical meristem development	2.61E-03
55	GO:0044209: AMP salvage	2.61E-03
56	GO:0000302: response to reactive oxygen species	3.46E-03
57	GO:0010193: response to ozone	3.46E-03
58	GO:0009648: photoperiodism	3.87E-03
59	GO:1901001: negative regulation of response to salt stress	3.87E-03
60	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.87E-03
61	GO:0030163: protein catabolic process	3.94E-03
62	GO:0006914: autophagy	4.20E-03
63	GO:0048528: post-embryonic root development	4.57E-03
64	GO:0009690: cytokinin metabolic process	5.30E-03
65	GO:0031540: regulation of anthocyanin biosynthetic process	5.30E-03
66	GO:0006102: isocitrate metabolic process	5.30E-03
67	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.30E-03
68	GO:0009642: response to light intensity	5.30E-03
69	GO:0006506: GPI anchor biosynthetic process	5.30E-03
70	GO:0019430: removal of superoxide radicals	6.08E-03
71	GO:0022900: electron transport chain	6.08E-03
72	GO:0016049: cell growth	6.20E-03
73	GO:0006413: translational initiation	6.75E-03
74	GO:0015780: nucleotide-sugar transport	6.89E-03
75	GO:0098656: anion transmembrane transport	6.89E-03
76	GO:0046685: response to arsenic-containing substance	6.89E-03
77	GO:0009245: lipid A biosynthetic process	6.89E-03
78	GO:0006811: ion transport	7.20E-03
79	GO:0010043: response to zinc ion	7.55E-03
80	GO:0010449: root meristem growth	7.74E-03
81	GO:0009651: response to salt stress	8.47E-03
82	GO:0006032: chitin catabolic process	8.62E-03
83	GO:0043069: negative regulation of programmed cell death	8.62E-03
84	GO:0009617: response to bacterium	9.24E-03
85	GO:0072593: reactive oxygen species metabolic process	9.55E-03
86	GO:0000272: polysaccharide catabolic process	9.55E-03
87	GO:0048229: gametophyte development	9.55E-03
88	GO:0010015: root morphogenesis	9.55E-03
89	GO:0006913: nucleocytoplasmic transport	9.55E-03
90	GO:0009965: leaf morphogenesis	1.20E-02
91	GO:0046686: response to cadmium ion	1.22E-02
92	GO:0007034: vacuolar transport	1.25E-02
93	GO:0010167: response to nitrate	1.36E-02
94	GO:0034976: response to endoplasmic reticulum stress	1.47E-02
95	GO:0006406: mRNA export from nucleus	1.58E-02
96	GO:0006289: nucleotide-excision repair	1.58E-02
97	GO:0006487: protein N-linked glycosylation	1.58E-02
98	GO:0009116: nucleoside metabolic process	1.58E-02
99	GO:0030150: protein import into mitochondrial matrix	1.58E-02
100	GO:0006979: response to oxidative stress	1.63E-02
101	GO:0016192: vesicle-mediated transport	1.80E-02
102	GO:0048511: rhythmic process	1.81E-02
103	GO:0061077: chaperone-mediated protein folding	1.81E-02
104	GO:0016226: iron-sulfur cluster assembly	1.93E-02
105	GO:0007005: mitochondrion organization	1.93E-02
106	GO:0030245: cellulose catabolic process	1.93E-02
107	GO:0040007: growth	2.05E-02
108	GO:0045454: cell redox homeostasis	2.12E-02
109	GO:0006817: phosphate ion transport	2.18E-02
110	GO:0010584: pollen exine formation	2.18E-02
111	GO:0042147: retrograde transport, endosome to Golgi	2.31E-02
112	GO:0015031: protein transport	2.42E-02
113	GO:0010118: stomatal movement	2.44E-02
114	GO:0015991: ATP hydrolysis coupled proton transport	2.44E-02
115	GO:0042631: cellular response to water deprivation	2.44E-02
116	GO:0048825: cotyledon development	2.85E-02
117	GO:0009556: microsporogenesis	2.85E-02
118	GO:0006623: protein targeting to vacuole	2.85E-02
119	GO:0006635: fatty acid beta-oxidation	2.99E-02
120	GO:0000910: cytokinesis	3.73E-02
121	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.98E-02
122	GO:0009817: defense response to fungus, incompatible interaction	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
2	GO:0003796: lysozyme activity	0.00E+00
3	GO:0008752: FMN reductase activity	0.00E+00
4	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
5	GO:0003735: structural constituent of ribosome	1.43E-45
6	GO:0004298: threonine-type endopeptidase activity	2.72E-17
7	GO:0008233: peptidase activity	7.43E-10
8	GO:0015288: porin activity	7.85E-06
9	GO:0008308: voltage-gated anion channel activity	1.13E-05
10	GO:0008097: 5S rRNA binding	3.26E-05
11	GO:0003729: mRNA binding	1.04E-04
12	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.39E-04
13	GO:0090448: glucosinolate:proton symporter activity	2.99E-04
14	GO:0019786: Atg8-specific protease activity	2.99E-04
15	GO:0008517: folic acid transporter activity	6.55E-04
16	GO:0004047: aminomethyltransferase activity	6.55E-04
17	GO:0004582: dolichyl-phosphate beta-D-mannosyltransferase activity	6.55E-04
18	GO:0032934: sterol binding	6.55E-04
19	GO:0019779: Atg8 activating enzyme activity	6.55E-04
20	GO:0019843: rRNA binding	8.92E-04
21	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.06E-03
22	GO:0005457: GDP-fucose transmembrane transporter activity	1.06E-03
23	GO:0008253: 5'-nucleotidase activity	1.06E-03
24	GO:0003999: adenine phosphoribosyltransferase activity	1.52E-03
25	GO:0005460: UDP-glucose transmembrane transporter activity	1.52E-03
26	GO:0017077: oxidative phosphorylation uncoupler activity	1.52E-03
27	GO:0017089: glycolipid transporter activity	1.52E-03
28	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.52E-03
29	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.95E-03
30	GO:0070628: proteasome binding	2.04E-03
31	GO:0004576: oligosaccharyl transferase activity	2.04E-03
32	GO:0019776: Atg8 ligase activity	2.04E-03
33	GO:0016004: phospholipase activator activity	2.04E-03
34	GO:0010011: auxin binding	2.04E-03
35	GO:0051861: glycolipid binding	2.04E-03
36	GO:0005496: steroid binding	2.61E-03
37	GO:0005459: UDP-galactose transmembrane transporter activity	2.61E-03
38	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.61E-03
39	GO:0004601: peroxidase activity	2.82E-03
40	GO:0031593: polyubiquitin binding	3.22E-03
41	GO:0031177: phosphopantetheine binding	3.22E-03
42	GO:0000035: acyl binding	3.87E-03
43	GO:0004656: procollagen-proline 4-dioxygenase activity	3.87E-03
44	GO:0102391: decanoate--CoA ligase activity	3.87E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	4.57E-03
46	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.57E-03
47	GO:0043022: ribosome binding	5.30E-03
48	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	5.30E-03
49	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.53E-03
50	GO:0050897: cobalt ion binding	7.55E-03
51	GO:0045309: protein phosphorylated amino acid binding	7.74E-03
52	GO:0003746: translation elongation factor activity	8.28E-03
53	GO:0004568: chitinase activity	8.62E-03
54	GO:0019904: protein domain specific binding	9.55E-03
55	GO:0046961: proton-transporting ATPase activity, rotational mechanism	9.55E-03
56	GO:0008559: xenobiotic-transporting ATPase activity	9.55E-03
57	GO:0008794: arsenate reductase (glutaredoxin) activity	9.55E-03
58	GO:0015266: protein channel activity	1.15E-02
59	GO:0020037: heme binding	1.25E-02
60	GO:0008134: transcription factor binding	1.58E-02
61	GO:0031418: L-ascorbic acid binding	1.58E-02
62	GO:0043130: ubiquitin binding	1.58E-02
63	GO:0005528: FK506 binding	1.58E-02
64	GO:0008810: cellulase activity	2.05E-02
65	GO:0003756: protein disulfide isomerase activity	2.18E-02
66	GO:0008514: organic anion transmembrane transporter activity	2.18E-02
67	GO:0004791: thioredoxin-disulfide reductase activity	2.71E-02
68	GO:0010181: FMN binding	2.71E-02
69	GO:0004872: receptor activity	2.85E-02
70	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.99E-02
71	GO:0003684: damaged DNA binding	3.42E-02
72	GO:0003743: translation initiation factor activity	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0022625: cytosolic large ribosomal subunit	1.04E-38
2	GO:0005840: ribosome	2.31E-36
3	GO:0022626: cytosolic ribosome	1.77E-34
4	GO:0000502: proteasome complex	2.53E-20
5	GO:0005839: proteasome core complex	2.72E-17
6	GO:0005774: vacuolar membrane	2.41E-14
7	GO:0022627: cytosolic small ribosomal subunit	2.05E-13
8	GO:0005773: vacuole	1.12E-10
9	GO:0005829: cytosol	1.66E-10
10	GO:0019773: proteasome core complex, alpha-subunit complex	1.10E-09
11	GO:0005737: cytoplasm	1.23E-09
12	GO:0015934: large ribosomal subunit	1.17E-08
13	GO:0009506: plasmodesma	1.42E-08
14	GO:0005730: nucleolus	2.13E-08
15	GO:0046930: pore complex	1.13E-05
16	GO:0005783: endoplasmic reticulum	2.29E-05
17	GO:0005750: mitochondrial respiratory chain complex III	6.59E-05
18	GO:0005618: cell wall	7.61E-05
19	GO:0005741: mitochondrial outer membrane	1.46E-04
20	GO:0016020: membrane	2.48E-04
21	GO:0009510: plasmodesmatal desmotubule	2.99E-04
22	GO:0000421: autophagosome membrane	3.02E-04
23	GO:0033185: dolichol-phosphate-mannose synthase complex	6.55E-04
24	GO:0005886: plasma membrane	6.60E-04
25	GO:0005788: endoplasmic reticulum lumen	6.68E-04
26	GO:0008541: proteasome regulatory particle, lid subcomplex	7.11E-04
27	GO:0009507: chloroplast	9.33E-04
28	GO:0046861: glyoxysomal membrane	1.06E-03
29	GO:0005758: mitochondrial intermembrane space	1.42E-03
30	GO:0071782: endoplasmic reticulum tubular network	1.52E-03
31	GO:0005775: vacuolar lumen	1.52E-03
32	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.52E-03
33	GO:0045271: respiratory chain complex I	1.56E-03
34	GO:0070469: respiratory chain	1.56E-03
35	GO:0031410: cytoplasmic vesicle	1.88E-03
36	GO:0005776: autophagosome	2.04E-03
37	GO:0008250: oligosaccharyltransferase complex	2.61E-03
38	GO:0005747: mitochondrial respiratory chain complex I	3.03E-03
39	GO:0005771: multivesicular body	3.22E-03
40	GO:0030904: retromer complex	3.22E-03
41	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.30E-03
42	GO:0009514: glyoxysome	6.08E-03
43	GO:0005742: mitochondrial outer membrane translocase complex	6.08E-03
44	GO:0005759: mitochondrial matrix	6.54E-03
45	GO:0000325: plant-type vacuole	7.55E-03
46	GO:0005740: mitochondrial envelope	8.62E-03
47	GO:0005665: DNA-directed RNA polymerase II, core complex	1.05E-02
48	GO:0019013: viral nucleocapsid	1.15E-02
49	GO:0005794: Golgi apparatus	1.32E-02
50	GO:0031966: mitochondrial membrane	1.35E-02
51	GO:0005769: early endosome	1.47E-02
52	GO:0000419: DNA-directed RNA polymerase V complex	1.47E-02
53	GO:0005681: spliceosomal complex	1.71E-02
54	GO:0015935: small ribosomal subunit	1.81E-02
55	GO:0005777: peroxisome	2.07E-02
56	GO:0005732: small nucleolar ribonucleoprotein complex	2.25E-02
57	GO:0005743: mitochondrial inner membrane	2.52E-02
58	GO:0009504: cell plate	2.85E-02
59	GO:0005789: endoplasmic reticulum membrane	3.29E-02
60	GO:0032580: Golgi cisterna membrane	3.42E-02
61	GO:0009707: chloroplast outer membrane	4.69E-02