Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G23550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
2GO:0032499: detection of peptidoglycan0.00E+00
3GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
4GO:0071289: cellular response to nickel ion0.00E+00
5GO:1900067: regulation of cellular response to alkaline pH0.00E+00
6GO:1903086: negative regulation of sinapate ester biosynthetic process0.00E+00
7GO:0006862: nucleotide transport0.00E+00
8GO:0032497: detection of lipopolysaccharide0.00E+00
9GO:0019481: L-alanine catabolic process, by transamination0.00E+00
10GO:0010200: response to chitin9.28E-18
11GO:0006955: immune response5.30E-06
12GO:0006468: protein phosphorylation1.13E-05
13GO:0051865: protein autoubiquitination1.60E-05
14GO:0002679: respiratory burst involved in defense response3.30E-05
15GO:1902347: response to strigolactone5.93E-05
16GO:0006952: defense response9.88E-05
17GO:0010337: regulation of salicylic acid metabolic process1.36E-04
18GO:0032491: detection of molecule of fungal origin3.02E-04
19GO:0034628: 'de novo' NAD biosynthetic process from aspartate3.02E-04
20GO:0010726: positive regulation of hydrogen peroxide metabolic process3.02E-04
21GO:0051180: vitamin transport3.02E-04
22GO:0030974: thiamine pyrophosphate transport3.02E-04
23GO:0050691: regulation of defense response to virus by host3.02E-04
24GO:0045010: actin nucleation3.05E-04
25GO:0048544: recognition of pollen3.28E-04
26GO:0009737: response to abscisic acid3.44E-04
27GO:0007166: cell surface receptor signaling pathway3.52E-04
28GO:0009611: response to wounding3.56E-04
29GO:0002229: defense response to oomycetes3.93E-04
30GO:0042742: defense response to bacterium4.89E-04
31GO:2000280: regulation of root development5.34E-04
32GO:0019538: protein metabolic process6.23E-04
33GO:0046939: nucleotide phosphorylation6.60E-04
34GO:0042754: negative regulation of circadian rhythm6.60E-04
35GO:0010372: positive regulation of gibberellin biosynthetic process6.60E-04
36GO:0006741: NADP biosynthetic process6.60E-04
37GO:0015893: drug transport6.60E-04
38GO:0052542: defense response by callose deposition6.60E-04
39GO:0008219: cell death8.83E-04
40GO:0046777: protein autophosphorylation1.00E-03
41GO:0051176: positive regulation of sulfur metabolic process1.07E-03
42GO:0010366: negative regulation of ethylene biosynthetic process1.07E-03
43GO:0019674: NAD metabolic process1.07E-03
44GO:0010447: response to acidic pH1.07E-03
45GO:0080168: abscisic acid transport1.07E-03
46GO:0042344: indole glucosinolate catabolic process1.07E-03
47GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.07E-03
48GO:0006598: polyamine catabolic process1.07E-03
49GO:0045087: innate immune response1.18E-03
50GO:0046686: response to cadmium ion1.42E-03
51GO:0019363: pyridine nucleotide biosynthetic process1.53E-03
52GO:0043207: response to external biotic stimulus1.53E-03
53GO:0030100: regulation of endocytosis1.53E-03
54GO:0009399: nitrogen fixation1.53E-03
55GO:0033014: tetrapyrrole biosynthetic process1.53E-03
56GO:0015696: ammonium transport1.53E-03
57GO:0071323: cellular response to chitin1.53E-03
58GO:0009695: jasmonic acid biosynthetic process1.58E-03
59GO:0016226: iron-sulfur cluster assembly1.90E-03
60GO:0009617: response to bacterium1.93E-03
61GO:0015743: malate transport2.06E-03
62GO:0009652: thigmotropism2.06E-03
63GO:0072488: ammonium transmembrane transport2.06E-03
64GO:0006536: glutamate metabolic process2.06E-03
65GO:0010107: potassium ion import2.06E-03
66GO:0071219: cellular response to molecule of bacterial origin2.06E-03
67GO:0034440: lipid oxidation2.06E-03
68GO:0009686: gibberellin biosynthetic process2.07E-03
69GO:0009435: NAD biosynthetic process2.63E-03
70GO:0009164: nucleoside catabolic process2.63E-03
71GO:2000762: regulation of phenylpropanoid metabolic process2.63E-03
72GO:0045487: gibberellin catabolic process2.63E-03
73GO:0030041: actin filament polymerization2.63E-03
74GO:0006014: D-ribose metabolic process3.24E-03
75GO:0010942: positive regulation of cell death3.24E-03
76GO:0006751: glutathione catabolic process3.24E-03
77GO:0048317: seed morphogenesis3.24E-03
78GO:0006796: phosphate-containing compound metabolic process3.24E-03
79GO:1900425: negative regulation of defense response to bacterium3.24E-03
80GO:0009749: response to glucose3.27E-03
81GO:0010555: response to mannitol3.90E-03
82GO:0080086: stamen filament development3.90E-03
83GO:2000067: regulation of root morphogenesis3.90E-03
84GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.90E-03
85GO:0009742: brassinosteroid mediated signaling pathway4.02E-03
86GO:0010044: response to aluminum ion4.60E-03
87GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.60E-03
88GO:0010161: red light signaling pathway4.60E-03
89GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway4.60E-03
90GO:0009414: response to water deprivation5.03E-03
91GO:0035556: intracellular signal transduction5.31E-03
92GO:2000070: regulation of response to water deprivation5.35E-03
93GO:0048658: anther wall tapetum development5.35E-03
94GO:0006402: mRNA catabolic process5.35E-03
95GO:1900150: regulation of defense response to fungus5.35E-03
96GO:0009699: phenylpropanoid biosynthetic process6.13E-03
97GO:0009932: cell tip growth6.13E-03
98GO:0007186: G-protein coupled receptor signaling pathway6.13E-03
99GO:0009817: defense response to fungus, incompatible interaction6.61E-03
100GO:0010311: lateral root formation6.94E-03
101GO:0009060: aerobic respiration6.95E-03
102GO:0098656: anion transmembrane transport6.95E-03
103GO:0090305: nucleic acid phosphodiester bond hydrolysis6.95E-03
104GO:0090333: regulation of stomatal closure6.95E-03
105GO:0006783: heme biosynthetic process6.95E-03
106GO:0008202: steroid metabolic process7.80E-03
107GO:0006779: porphyrin-containing compound biosynthetic process7.80E-03
108GO:0009753: response to jasmonic acid8.02E-03
109GO:0048829: root cap development8.70E-03
110GO:0006782: protoporphyrinogen IX biosynthetic process8.70E-03
111GO:0006839: mitochondrial transport9.56E-03
112GO:0009750: response to fructose9.63E-03
113GO:0010015: root morphogenesis9.63E-03
114GO:0009682: induced systemic resistance9.63E-03
115GO:0052544: defense response by callose deposition in cell wall9.63E-03
116GO:1903507: negative regulation of nucleic acid-templated transcription9.63E-03
117GO:0010105: negative regulation of ethylene-activated signaling pathway1.06E-02
118GO:0055046: microgametogenesis1.16E-02
119GO:0034605: cellular response to heat1.26E-02
120GO:0002237: response to molecule of bacterial origin1.26E-02
121GO:0031347: regulation of defense response1.31E-02
122GO:0090351: seedling development1.37E-02
123GO:0009901: anther dehiscence1.37E-02
124GO:0071732: cellular response to nitric oxide1.37E-02
125GO:0006970: response to osmotic stress1.44E-02
126GO:0010224: response to UV-B1.52E-02
127GO:0009723: response to ethylene1.57E-02
128GO:0009863: salicylic acid mediated signaling pathway1.59E-02
129GO:0009738: abscisic acid-activated signaling pathway1.63E-02
130GO:0006979: response to oxidative stress1.67E-02
131GO:0043622: cortical microtubule organization1.71E-02
132GO:0009555: pollen development1.72E-02
133GO:0016567: protein ubiquitination1.79E-02
134GO:0016998: cell wall macromolecule catabolic process1.82E-02
135GO:0098542: defense response to other organism1.82E-02
136GO:0031408: oxylipin biosynthetic process1.82E-02
137GO:0009626: plant-type hypersensitive response1.85E-02
138GO:0009620: response to fungus1.91E-02
139GO:0030245: cellulose catabolic process1.95E-02
140GO:2000022: regulation of jasmonic acid mediated signaling pathway1.95E-02
141GO:0030433: ubiquitin-dependent ERAD pathway1.95E-02
142GO:0071369: cellular response to ethylene stimulus2.07E-02
143GO:0040007: growth2.07E-02
144GO:0071215: cellular response to abscisic acid stimulus2.07E-02
145GO:0009624: response to nematode2.09E-02
146GO:0009306: protein secretion2.20E-02
147GO:0010089: xylem development2.20E-02
148GO:0045492: xylan biosynthetic process2.20E-02
149GO:0006817: phosphate ion transport2.20E-02
150GO:0045892: negative regulation of transcription, DNA-templated2.20E-02
151GO:0010091: trichome branching2.20E-02
152GO:0019722: calcium-mediated signaling2.20E-02
153GO:0010118: stomatal movement2.46E-02
154GO:0048653: anther development2.46E-02
155GO:0042631: cellular response to water deprivation2.46E-02
156GO:0009960: endosperm development2.59E-02
157GO:0009845: seed germination2.83E-02
158GO:0019252: starch biosynthetic process2.87E-02
159GO:0016310: phosphorylation2.95E-02
160GO:0010193: response to ozone3.01E-02
161GO:0009630: gravitropism3.16E-02
162GO:0031047: gene silencing by RNA3.16E-02
163GO:1901657: glycosyl compound metabolic process3.31E-02
164GO:0071281: cellular response to iron ion3.31E-02
165GO:0010090: trichome morphogenesis3.31E-02
166GO:0019760: glucosinolate metabolic process3.46E-02
167GO:0009639: response to red or far red light3.46E-02
168GO:0006904: vesicle docking involved in exocytosis3.61E-02
169GO:0007623: circadian rhythm3.61E-02
170GO:0009615: response to virus3.92E-02
171GO:0001666: response to hypoxia3.92E-02
172GO:0006357: regulation of transcription from RNA polymerase II promoter3.97E-02
173GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.03E-02
174GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.07E-02
175GO:0006470: protein dephosphorylation4.12E-02
176GO:0048573: photoperiodism, flowering4.40E-02
177GO:0015995: chlorophyll biosynthetic process4.40E-02
178GO:0016049: cell growth4.56E-02
RankGO TermAdjusted P value
1GO:2001080: chitosan binding0.00E+00
2GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
3GO:0010857: calcium-dependent protein kinase activity0.00E+00
4GO:0015215: nucleotide transmembrane transporter activity0.00E+00
5GO:0008987: quinolinate synthetase A activity0.00E+00
6GO:0005522: profilin binding0.00E+00
7GO:0047734: CDP-glycerol diphosphatase activity0.00E+00
8GO:0016301: kinase activity5.89E-07
9GO:0004674: protein serine/threonine kinase activity3.27E-06
10GO:0005524: ATP binding4.18E-05
11GO:0047631: ADP-ribose diphosphatase activity9.36E-05
12GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.39E-04
13GO:0042736: NADH kinase activity3.02E-04
14GO:0052894: norspermine:oxygen oxidoreductase activity3.02E-04
15GO:0090422: thiamine pyrophosphate transporter activity3.02E-04
16GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.02E-04
17GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity3.02E-04
18GO:0090440: abscisic acid transporter activity3.02E-04
19GO:0003951: NAD+ kinase activity3.75E-04
20GO:0004713: protein tyrosine kinase activity6.23E-04
21GO:0004103: choline kinase activity6.60E-04
22GO:0008883: glutamyl-tRNA reductase activity6.60E-04
23GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity6.60E-04
24GO:0043141: ATP-dependent 5'-3' DNA helicase activity6.60E-04
25GO:0030246: carbohydrate binding6.66E-04
26GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.06E-03
27GO:0004383: guanylate cyclase activity1.07E-03
28GO:0016165: linoleate 13S-lipoxygenase activity1.07E-03
29GO:0004842: ubiquitin-protein transferase activity1.07E-03
30GO:0001664: G-protein coupled receptor binding1.07E-03
31GO:0046592: polyamine oxidase activity1.07E-03
32GO:0031683: G-protein beta/gamma-subunit complex binding1.07E-03
33GO:0003840: gamma-glutamyltransferase activity1.07E-03
34GO:0036374: glutathione hydrolase activity1.07E-03
35GO:0046423: allene-oxide cyclase activity1.07E-03
36GO:0004672: protein kinase activity1.23E-03
37GO:0004351: glutamate decarboxylase activity1.53E-03
38GO:0019201: nucleotide kinase activity1.53E-03
39GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.53E-03
40GO:0001653: peptide receptor activity1.53E-03
41GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.53E-03
42GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.53E-03
43GO:0004715: non-membrane spanning protein tyrosine kinase activity1.53E-03
44GO:0043015: gamma-tubulin binding2.06E-03
45GO:0019199: transmembrane receptor protein kinase activity2.06E-03
46GO:0005253: anion channel activity2.06E-03
47GO:0002020: protease binding2.63E-03
48GO:0004356: glutamate-ammonia ligase activity2.63E-03
49GO:0018685: alkane 1-monooxygenase activity2.63E-03
50GO:0008519: ammonium transmembrane transporter activity3.24E-03
51GO:0035673: oligopeptide transmembrane transporter activity3.24E-03
52GO:0000210: NAD+ diphosphatase activity3.24E-03
53GO:0019137: thioglucosidase activity3.24E-03
54GO:0016462: pyrophosphatase activity3.24E-03
55GO:0003779: actin binding3.59E-03
56GO:0019900: kinase binding3.90E-03
57GO:0051020: GTPase binding3.90E-03
58GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides3.90E-03
59GO:0004747: ribokinase activity3.90E-03
60GO:0004017: adenylate kinase activity3.90E-03
61GO:0043295: glutathione binding4.60E-03
62GO:0004143: diacylglycerol kinase activity4.60E-03
63GO:0004427: inorganic diphosphatase activity4.60E-03
64GO:0016621: cinnamoyl-CoA reductase activity4.60E-03
65GO:0015140: malate transmembrane transporter activity4.60E-03
66GO:0008143: poly(A) binding4.60E-03
67GO:0004714: transmembrane receptor protein tyrosine kinase activity5.35E-03
68GO:0008865: fructokinase activity5.35E-03
69GO:0102483: scopolin beta-glucosidase activity5.97E-03
70GO:0004721: phosphoprotein phosphatase activity5.97E-03
71GO:0008142: oxysterol binding6.13E-03
72GO:0003678: DNA helicase activity6.95E-03
73GO:0009055: electron carrier activity8.02E-03
74GO:0008047: enzyme activator activity8.70E-03
75GO:0008422: beta-glucosidase activity9.16E-03
76GO:0043565: sequence-specific DNA binding9.68E-03
77GO:0005516: calmodulin binding9.86E-03
78GO:0015198: oligopeptide transporter activity1.06E-02
79GO:0005315: inorganic phosphate transmembrane transporter activity1.16E-02
80GO:0019888: protein phosphatase regulator activity1.16E-02
81GO:0008131: primary amine oxidase activity1.26E-02
82GO:0008061: chitin binding1.37E-02
83GO:0004725: protein tyrosine phosphatase activity1.48E-02
84GO:0050660: flavin adenine dinucleotide binding1.57E-02
85GO:0003714: transcription corepressor activity1.59E-02
86GO:0031625: ubiquitin protein ligase binding1.62E-02
87GO:0051087: chaperone binding1.71E-02
88GO:0019706: protein-cysteine S-palmitoyltransferase activity1.82E-02
89GO:0008408: 3'-5' exonuclease activity1.82E-02
90GO:0004707: MAP kinase activity1.82E-02
91GO:0033612: receptor serine/threonine kinase binding1.82E-02
92GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.16E-02
93GO:0008514: organic anion transmembrane transporter activity2.20E-02
94GO:0004722: protein serine/threonine phosphatase activity2.42E-02
95GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.47E-02
96GO:0050662: coenzyme binding2.73E-02
97GO:0019901: protein kinase binding2.87E-02
98GO:0004518: nuclease activity3.16E-02
99GO:0051015: actin filament binding3.31E-02
100GO:0016791: phosphatase activity3.46E-02
101GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.61E-02
102GO:0009931: calcium-dependent protein serine/threonine kinase activity4.24E-02
103GO:0005509: calcium ion binding4.29E-02
104GO:0004683: calmodulin-dependent protein kinase activity4.40E-02
105GO:0030247: polysaccharide binding4.40E-02
106GO:0044212: transcription regulatory region DNA binding4.81E-02
107GO:0015238: drug transmembrane transporter activity4.90E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.85E-06
2GO:0005911: cell-cell junction3.02E-04
3GO:0016442: RISC complex3.02E-04
4GO:0010494: cytoplasmic stress granule4.52E-04
5GO:0016021: integral component of membrane2.84E-03
6GO:0010008: endosome membrane3.07E-03
7GO:0016363: nuclear matrix3.90E-03
8GO:0016604: nuclear body7.80E-03
9GO:0000159: protein phosphatase type 2A complex9.63E-03
10GO:0090404: pollen tube tip9.63E-03
11GO:0071013: catalytic step 2 spliceosome9.63E-03
12GO:0048471: perinuclear region of cytoplasm9.63E-03
13GO:0031902: late endosome membrane9.98E-03
14GO:0005768: endosome1.37E-02
15GO:0043234: protein complex1.48E-02
16GO:0005758: mitochondrial intermembrane space1.59E-02
17GO:0030136: clathrin-coated vesicle2.33E-02
18GO:0009506: plasmodesma2.34E-02
19GO:0005743: mitochondrial inner membrane2.56E-02
20GO:0005770: late endosome2.59E-02
21GO:0000145: exocyst3.16E-02
22GO:0005778: peroxisomal membrane3.61E-02
23GO:0000932: P-body3.92E-02
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Gene type



Gene DE type