co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G23410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:1905177: tracheary element differentiation	0.00E+00
3	GO:0060627: regulation of vesicle-mediated transport	8.78E-05
4	GO:0015786: UDP-glucose transport	2.08E-04
5	GO:0044210: 'de novo' CTP biosynthetic process	3.48E-04
6	GO:0010623: programmed cell death involved in cell development	3.48E-04
7	GO:0015783: GDP-fucose transport	3.48E-04
8	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.93E-04
9	GO:0070417: cellular response to cold	4.63E-04
10	GO:1901000: regulation of response to salt stress	5.01E-04
11	GO:0072334: UDP-galactose transmembrane transport	5.01E-04
12	GO:0030100: regulation of endocytosis	5.01E-04
13	GO:0071585: detoxification of cadmium ion	6.66E-04
14	GO:0046345: abscisic acid catabolic process	6.66E-04
15	GO:0015689: molybdate ion transport	6.66E-04
16	GO:0022622: root system development	6.66E-04
17	GO:0010508: positive regulation of autophagy	6.66E-04
18	GO:0009828: plant-type cell wall loosening	7.93E-04
19	GO:0006461: protein complex assembly	8.44E-04
20	GO:0009823: cytokinin catabolic process	8.44E-04
21	GO:0006656: phosphatidylcholine biosynthetic process	8.44E-04
22	GO:0009913: epidermal cell differentiation	1.03E-03
23	GO:0047484: regulation of response to osmotic stress	1.03E-03
24	GO:1900425: negative regulation of defense response to bacterium	1.03E-03
25	GO:0006974: cellular response to DNA damage stimulus	1.04E-03
26	GO:0071470: cellular response to osmotic stress	1.23E-03
27	GO:0009631: cold acclimation	1.39E-03
28	GO:0010103: stomatal complex morphogenesis	1.44E-03
29	GO:0032880: regulation of protein localization	1.44E-03
30	GO:0009690: cytokinin metabolic process	1.66E-03
31	GO:0009704: de-etiolation	1.66E-03
32	GO:0008610: lipid biosynthetic process	1.66E-03
33	GO:0042255: ribosome assembly	1.66E-03
34	GO:0006353: DNA-templated transcription, termination	1.66E-03
35	GO:0042761: very long-chain fatty acid biosynthetic process	2.39E-03
36	GO:0009664: plant-type cell wall organization	2.43E-03
37	GO:0042538: hyperosmotic salinity response	2.43E-03
38	GO:0009641: shade avoidance	2.65E-03
39	GO:0006949: syncytium formation	2.65E-03
40	GO:0043086: negative regulation of catalytic activity	3.07E-03
41	GO:0045037: protein import into chloroplast stroma	3.21E-03
42	GO:2000012: regulation of auxin polar transport	3.50E-03
43	GO:0009624: response to nematode	3.69E-03
44	GO:0030154: cell differentiation	4.08E-03
45	GO:0010025: wax biosynthetic process	4.42E-03
46	GO:0009833: plant-type primary cell wall biogenesis	4.42E-03
47	GO:0006289: nucleotide-excision repair	4.74E-03
48	GO:0030150: protein import into mitochondrial matrix	4.74E-03
49	GO:0007017: microtubule-based process	5.07E-03
50	GO:0015031: protein transport	5.15E-03
51	GO:0009409: response to cold	5.67E-03
52	GO:0045490: pectin catabolic process	6.35E-03
53	GO:0010089: xylem development	6.48E-03
54	GO:0006284: base-excision repair	6.48E-03
55	GO:0008284: positive regulation of cell proliferation	6.86E-03
56	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.86E-03
57	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	7.11E-03
58	GO:0042631: cellular response to water deprivation	7.24E-03
59	GO:0009958: positive gravitropism	7.62E-03
60	GO:0010268: brassinosteroid homeostasis	7.62E-03
61	GO:0048825: cotyledon development	8.42E-03
62	GO:0009749: response to glucose	8.42E-03
63	GO:0016132: brassinosteroid biosynthetic process	8.83E-03
64	GO:0010583: response to cyclopentenone	9.24E-03
65	GO:0032502: developmental process	9.24E-03
66	GO:0009826: unidimensional cell growth	9.46E-03
67	GO:0009639: response to red or far red light	1.01E-02
68	GO:0016125: sterol metabolic process	1.01E-02
69	GO:0019760: glucosinolate metabolic process	1.01E-02
70	GO:0048527: lateral root development	1.53E-02
71	GO:0009414: response to water deprivation	1.53E-02
72	GO:0006979: response to oxidative stress	1.59E-02
73	GO:0016051: carbohydrate biosynthetic process	1.63E-02
74	GO:0006631: fatty acid metabolic process	1.84E-02
75	GO:0008283: cell proliferation	1.95E-02
76	GO:0010114: response to red light	1.95E-02
77	GO:0009744: response to sucrose	1.95E-02
78	GO:0000209: protein polyubiquitination	2.01E-02
79	GO:0006260: DNA replication	2.24E-02
80	GO:0009585: red, far-red light phototransduction	2.41E-02
81	GO:0048367: shoot system development	2.78E-02
82	GO:0042545: cell wall modification	3.04E-02
83	GO:0009742: brassinosteroid mediated signaling pathway	3.23E-02
84	GO:0009058: biosynthetic process	3.78E-02
85	GO:0009845: seed germination	3.85E-02
86	GO:0009737: response to abscisic acid	4.05E-02
87	GO:0009739: response to gibberellin	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0003883: CTP synthase activity	3.77E-06
2	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	8.78E-05
3	GO:0004105: choline-phosphate cytidylyltransferase activity	8.78E-05
4	GO:0008083: growth factor activity	1.91E-04
5	GO:0003690: double-stranded DNA binding	2.82E-04
6	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	3.48E-04
7	GO:0005457: GDP-fucose transmembrane transporter activity	3.48E-04
8	GO:0005460: UDP-glucose transmembrane transporter activity	5.01E-04
9	GO:0003924: GTPase activity	5.20E-04
10	GO:0019104: DNA N-glycosylase activity	6.66E-04
11	GO:0015098: molybdate ion transmembrane transporter activity	6.66E-04
12	GO:0046910: pectinesterase inhibitor activity	7.77E-04
13	GO:0005459: UDP-galactose transmembrane transporter activity	8.44E-04
14	GO:0019139: cytokinin dehydrogenase activity	8.44E-04
15	GO:0004620: phospholipase activity	1.44E-03
16	GO:0015288: porin activity	1.66E-03
17	GO:0016209: antioxidant activity	1.66E-03
18	GO:0061630: ubiquitin protein ligase activity	2.03E-03
19	GO:0005525: GTP binding	2.61E-03
20	GO:0015020: glucuronosyltransferase activity	2.65E-03
21	GO:0015266: protein channel activity	3.50E-03
22	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.80E-03
23	GO:0043565: sequence-specific DNA binding	4.16E-03
24	GO:0030570: pectate lyase activity	6.12E-03
25	GO:0003727: single-stranded RNA binding	6.48E-03
26	GO:0003684: damaged DNA binding	1.01E-02
27	GO:0005200: structural constituent of cytoskeleton	1.05E-02
28	GO:0008375: acetylglucosaminyltransferase activity	1.24E-02
29	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.38E-02
30	GO:0004222: metalloendopeptidase activity	1.48E-02
31	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.53E-02
32	GO:0044212: transcription regulatory region DNA binding	1.58E-02
33	GO:0003993: acid phosphatase activity	1.68E-02
34	GO:0015171: amino acid transmembrane transporter activity	2.60E-02
35	GO:0031625: ubiquitin protein ligase binding	2.60E-02
36	GO:0045330: aspartyl esterase activity	2.60E-02
37	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.78E-02
38	GO:0016874: ligase activity	2.97E-02
39	GO:0030599: pectinesterase activity	2.97E-02
40	GO:0022857: transmembrane transporter activity	2.97E-02
41	GO:0019843: rRNA binding	3.64E-02
42	GO:0016829: lyase activity	3.85E-02
43	GO:0004252: serine-type endopeptidase activity	3.92E-02
44	GO:0015144: carbohydrate transmembrane transporter activity	4.14E-02
45	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.35E-02
46	GO:0015297: antiporter activity	4.43E-02
47	GO:0005351: sugar:proton symporter activity	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0031357: integral component of chloroplast inner membrane	4.16E-07
3	GO:0009527: plastid outer membrane	6.66E-04
4	GO:0005798: Golgi-associated vesicle	1.03E-03
5	GO:0031305: integral component of mitochondrial inner membrane	1.66E-03
6	GO:0046930: pore complex	1.89E-03
7	GO:0045298: tubulin complex	2.14E-03
8	GO:0005618: cell wall	2.52E-03
9	GO:0016607: nuclear speck	3.17E-03
10	GO:0009508: plastid chromosome	3.50E-03
11	GO:0031012: extracellular matrix	3.50E-03
12	GO:0005769: early endosome	4.42E-03
13	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.48E-03
14	GO:0005615: extracellular space	7.11E-03
15	GO:0046658: anchored component of plasma membrane	8.41E-03
16	GO:0009295: nucleoid	1.05E-02
17	GO:0031225: anchored component of membrane	1.13E-02
18	GO:0009707: chloroplast outer membrane	1.38E-02
19	GO:0005886: plasma membrane	2.20E-02
20	GO:0000139: Golgi membrane	2.31E-02
21	GO:0005773: vacuole	4.34E-02
22	GO:0005794: Golgi apparatus	4.52E-02