co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G23060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
2	GO:0019593: mannitol biosynthetic process	0.00E+00
3	GO:0070328: triglyceride homeostasis	0.00E+00
4	GO:0055091: phospholipid homeostasis	0.00E+00
5	GO:1904526: regulation of microtubule binding	0.00E+00
6	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
7	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
8	GO:0009737: response to abscisic acid	1.03E-07
9	GO:0009409: response to cold	9.73E-07
10	GO:0009873: ethylene-activated signaling pathway	1.46E-06
11	GO:0006970: response to osmotic stress	2.64E-05
12	GO:0006633: fatty acid biosynthetic process	2.95E-05
13	GO:0010200: response to chitin	4.69E-05
14	GO:0006811: ion transport	5.07E-05
15	GO:0009631: cold acclimation	5.65E-05
16	GO:0042335: cuticle development	7.38E-05
17	GO:0006631: fatty acid metabolic process	1.01E-04
18	GO:0009414: response to water deprivation	1.09E-04
19	GO:0000038: very long-chain fatty acid metabolic process	1.20E-04
20	GO:0009611: response to wounding	1.84E-04
21	GO:0035435: phosphate ion transmembrane transport	3.14E-04
22	GO:0045926: negative regulation of growth	4.19E-04
23	GO:0034472: snRNA 3'-end processing	5.15E-04
24	GO:0051180: vitamin transport	5.15E-04
25	GO:0009609: response to symbiotic bacterium	5.15E-04
26	GO:1902265: abscisic acid homeostasis	5.15E-04
27	GO:0030974: thiamine pyrophosphate transport	5.15E-04
28	GO:0009865: pollen tube adhesion	5.15E-04
29	GO:0006680: glucosylceramide catabolic process	5.15E-04
30	GO:0080051: cutin transport	5.15E-04
31	GO:0033481: galacturonate biosynthetic process	5.15E-04
32	GO:0009819: drought recovery	6.69E-04
33	GO:0009415: response to water	6.69E-04
34	GO:2000070: regulation of response to water deprivation	6.69E-04
35	GO:0070417: cellular response to cold	6.77E-04
36	GO:0045489: pectin biosynthetic process	8.23E-04
37	GO:0098656: anion transmembrane transport	9.74E-04
38	GO:0010507: negative regulation of autophagy	1.11E-03
39	GO:0015709: thiosulfate transport	1.11E-03
40	GO:0071422: succinate transmembrane transport	1.11E-03
41	GO:0031407: oxylipin metabolic process	1.11E-03
42	GO:0010289: homogalacturonan biosynthetic process	1.11E-03
43	GO:0055088: lipid homeostasis	1.11E-03
44	GO:1901679: nucleotide transmembrane transport	1.11E-03
45	GO:0015786: UDP-glucose transport	1.11E-03
46	GO:0015908: fatty acid transport	1.11E-03
47	GO:0006898: receptor-mediated endocytosis	1.11E-03
48	GO:0015893: drug transport	1.11E-03
49	GO:0042538: hyperosmotic salinity response	1.13E-03
50	GO:2000280: regulation of root development	1.15E-03
51	GO:0006470: protein dephosphorylation	1.46E-03
52	GO:0030148: sphingolipid biosynthetic process	1.55E-03
53	GO:0090630: activation of GTPase activity	1.81E-03
54	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.81E-03
55	GO:0015783: GDP-fucose transport	1.81E-03
56	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.81E-03
57	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.81E-03
58	GO:1902448: positive regulation of shade avoidance	1.81E-03
59	GO:0080168: abscisic acid transport	1.81E-03
60	GO:0044210: 'de novo' CTP biosynthetic process	1.81E-03
61	GO:0016045: detection of bacterium	1.81E-03
62	GO:0010359: regulation of anion channel activity	1.81E-03
63	GO:0010288: response to lead ion	1.81E-03
64	GO:0080121: AMP transport	1.81E-03
65	GO:0010029: regulation of seed germination	1.84E-03
66	GO:0006355: regulation of transcription, DNA-templated	1.86E-03
67	GO:0018107: peptidyl-threonine phosphorylation	2.01E-03
68	GO:0009624: response to nematode	2.17E-03
69	GO:0070588: calcium ion transmembrane transport	2.55E-03
70	GO:0055089: fatty acid homeostasis	2.63E-03
71	GO:0006624: vacuolar protein processing	2.63E-03
72	GO:0010371: regulation of gibberellin biosynthetic process	2.63E-03
73	GO:0015729: oxaloacetate transport	2.63E-03
74	GO:0072334: UDP-galactose transmembrane transport	2.63E-03
75	GO:0009833: plant-type primary cell wall biogenesis	2.84E-03
76	GO:0010025: wax biosynthetic process	2.84E-03
77	GO:0016051: carbohydrate biosynthetic process	3.26E-03
78	GO:0009695: jasmonic acid biosynthetic process	3.49E-03
79	GO:0010222: stem vascular tissue pattern formation	3.54E-03
80	GO:0009687: abscisic acid metabolic process	3.54E-03
81	GO:0046345: abscisic acid catabolic process	3.54E-03
82	GO:0051365: cellular response to potassium ion starvation	3.54E-03
83	GO:0071585: detoxification of cadmium ion	3.54E-03
84	GO:0022622: root system development	3.54E-03
85	GO:0006552: leucine catabolic process	3.54E-03
86	GO:0042991: transcription factor import into nucleus	3.54E-03
87	GO:1902347: response to strigolactone	3.54E-03
88	GO:0015867: ATP transport	3.54E-03
89	GO:0009269: response to desiccation	3.83E-03
90	GO:0031408: oxylipin biosynthetic process	3.83E-03
91	GO:0006839: mitochondrial transport	3.85E-03
92	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.88E-03
93	GO:0009790: embryo development	3.88E-03
94	GO:0006665: sphingolipid metabolic process	4.54E-03
95	GO:0032957: inositol trisphosphate metabolic process	4.54E-03
96	GO:0009247: glycolipid biosynthetic process	4.54E-03
97	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	4.54E-03
98	GO:0071423: malate transmembrane transport	4.54E-03
99	GO:0009823: cytokinin catabolic process	4.54E-03
100	GO:0006873: cellular ion homeostasis	4.54E-03
101	GO:0006656: phosphatidylcholine biosynthetic process	4.54E-03
102	GO:0048497: maintenance of floral organ identity	4.54E-03
103	GO:0001944: vasculature development	4.58E-03
104	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.58E-03
105	GO:0045490: pectin catabolic process	5.01E-03
106	GO:0006751: glutathione catabolic process	5.63E-03
107	GO:0015866: ADP transport	5.63E-03
108	GO:0009913: epidermal cell differentiation	5.63E-03
109	GO:0047484: regulation of response to osmotic stress	5.63E-03
110	GO:1900425: negative regulation of defense response to bacterium	5.63E-03
111	GO:0006574: valine catabolic process	5.63E-03
112	GO:0042631: cellular response to water deprivation	5.85E-03
113	GO:0048868: pollen tube development	6.31E-03
114	GO:0010468: regulation of gene expression	6.56E-03
115	GO:0010555: response to mannitol	6.79E-03
116	GO:1901001: negative regulation of response to salt stress	6.79E-03
117	GO:0009082: branched-chain amino acid biosynthetic process	6.79E-03
118	GO:0098655: cation transmembrane transport	6.79E-03
119	GO:2000033: regulation of seed dormancy process	6.79E-03
120	GO:0009749: response to glucose	7.28E-03
121	GO:0006351: transcription, DNA-templated	7.43E-03
122	GO:0000302: response to reactive oxygen species	7.80E-03
123	GO:0010103: stomatal complex morphogenesis	8.04E-03
124	GO:0032880: regulation of protein localization	8.04E-03
125	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	8.04E-03
126	GO:0006401: RNA catabolic process	8.04E-03
127	GO:0009610: response to symbiotic fungus	8.04E-03
128	GO:0006955: immune response	8.04E-03
129	GO:0030497: fatty acid elongation	8.04E-03
130	GO:0008272: sulfate transport	8.04E-03
131	GO:0050829: defense response to Gram-negative bacterium	8.04E-03
132	GO:1902074: response to salt	8.04E-03
133	GO:0048367: shoot system development	8.53E-03
134	GO:0007155: cell adhesion	9.36E-03
135	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	9.36E-03
136	GO:0008610: lipid biosynthetic process	9.36E-03
137	GO:0009690: cytokinin metabolic process	9.36E-03
138	GO:0019375: galactolipid biosynthetic process	9.36E-03
139	GO:0042255: ribosome assembly	9.36E-03
140	GO:0006353: DNA-templated transcription, termination	9.36E-03
141	GO:0071555: cell wall organization	9.42E-03
142	GO:0019760: glucosinolate metabolic process	9.47E-03
143	GO:0009828: plant-type cell wall loosening	9.47E-03
144	GO:0042545: cell wall modification	9.99E-03
145	GO:0055085: transmembrane transport	1.02E-02
146	GO:0009827: plant-type cell wall modification	1.08E-02
147	GO:0009657: plastid organization	1.08E-02
148	GO:0009651: response to salt stress	1.13E-02
149	GO:0010345: suberin biosynthetic process	1.22E-02
150	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.22E-02
151	GO:0006098: pentose-phosphate shunt	1.22E-02
152	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.22E-02
153	GO:0080167: response to karrikin	1.35E-02
154	GO:0042761: very long-chain fatty acid biosynthetic process	1.38E-02
155	GO:0048268: clathrin coat assembly	1.38E-02
156	GO:0007346: regulation of mitotic cell cycle	1.38E-02
157	GO:0030244: cellulose biosynthetic process	1.48E-02
158	GO:0009641: shade avoidance	1.54E-02
159	GO:0006949: syncytium formation	1.54E-02
160	GO:0055062: phosphate ion homeostasis	1.54E-02
161	GO:0019538: protein metabolic process	1.54E-02
162	GO:0010015: root morphogenesis	1.70E-02
163	GO:0009698: phenylpropanoid metabolic process	1.70E-02
164	GO:0052544: defense response by callose deposition in cell wall	1.70E-02
165	GO:0018119: peptidyl-cysteine S-nitrosylation	1.70E-02
166	GO:0050832: defense response to fungus	1.87E-02
167	GO:0016024: CDP-diacylglycerol biosynthetic process	1.88E-02
168	GO:0045037: protein import into chloroplast stroma	1.88E-02
169	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.88E-02
170	GO:0009416: response to light stimulus	1.95E-02
171	GO:0050826: response to freezing	2.05E-02
172	GO:0005986: sucrose biosynthetic process	2.05E-02
173	GO:0010588: cotyledon vascular tissue pattern formation	2.05E-02
174	GO:2000012: regulation of auxin polar transport	2.05E-02
175	GO:0007623: circadian rhythm	2.08E-02
176	GO:0010150: leaf senescence	2.08E-02
177	GO:0048467: gynoecium development	2.24E-02
178	GO:0010143: cutin biosynthetic process	2.24E-02
179	GO:0010020: chloroplast fission	2.24E-02
180	GO:0009751: response to salicylic acid	2.37E-02
181	GO:0051707: response to other organism	2.43E-02
182	GO:0009225: nucleotide-sugar metabolic process	2.43E-02
183	GO:0010030: positive regulation of seed germination	2.43E-02
184	GO:0006468: protein phosphorylation	2.54E-02
185	GO:0006636: unsaturated fatty acid biosynthetic process	2.62E-02
186	GO:2000377: regulation of reactive oxygen species metabolic process	2.83E-02
187	GO:0009863: salicylic acid mediated signaling pathway	2.83E-02
188	GO:0030150: protein import into mitochondrial matrix	2.83E-02
189	GO:0010187: negative regulation of seed germination	2.83E-02
190	GO:0007017: microtubule-based process	3.03E-02
191	GO:0009664: plant-type cell wall organization	3.06E-02
192	GO:0051321: meiotic cell cycle	3.24E-02
193	GO:0006364: rRNA processing	3.28E-02
194	GO:0080092: regulation of pollen tube growth	3.46E-02
195	GO:0043086: negative regulation of catalytic activity	3.87E-02
196	GO:0010584: pollen exine formation	3.90E-02
197	GO:0048443: stamen development	3.90E-02
198	GO:0008284: positive regulation of cell proliferation	4.13E-02
199	GO:0000226: microtubule cytoskeleton organization	4.37E-02
200	GO:0000271: polysaccharide biosynthetic process	4.37E-02
201	GO:0010501: RNA secondary structure unwinding	4.37E-02
202	GO:0010268: brassinosteroid homeostasis	4.61E-02
203	GO:0009960: endosperm development	4.61E-02
204	GO:0009958: positive gravitropism	4.61E-02
205	GO:0010154: fruit development	4.61E-02
206	GO:0018105: peptidyl-serine phosphorylation	4.79E-02
207	GO:0006814: sodium ion transport	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
2	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
3	GO:0017048: Rho GTPase binding	0.00E+00
4	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
5	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.11E-08
6	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.11E-08
7	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.11E-08
8	GO:0009922: fatty acid elongase activity	2.60E-08
9	GO:0070330: aromatase activity	1.33E-07
10	GO:0018685: alkane 1-monooxygenase activity	4.02E-06
11	GO:0016629: 12-oxophytodienoate reductase activity	1.16E-05
12	GO:0003883: CTP synthase activity	8.39E-05
13	GO:0016746: transferase activity, transferring acyl groups	4.61E-04
14	GO:0090422: thiamine pyrophosphate transporter activity	5.15E-04
15	GO:0004105: choline-phosphate cytidylyltransferase activity	5.15E-04
16	GO:0005534: galactose binding	5.15E-04
17	GO:0004348: glucosylceramidase activity	5.15E-04
18	GO:0090440: abscisic acid transporter activity	5.15E-04
19	GO:0015245: fatty acid transporter activity	5.15E-04
20	GO:0010181: FMN binding	9.02E-04
21	GO:0015297: antiporter activity	1.06E-03
22	GO:0001047: core promoter binding	1.11E-03
23	GO:0042389: omega-3 fatty acid desaturase activity	1.11E-03
24	GO:0017040: ceramidase activity	1.11E-03
25	GO:0003839: gamma-glutamylcyclotransferase activity	1.11E-03
26	GO:0003958: NADPH-hemoprotein reductase activity	1.11E-03
27	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.11E-03
28	GO:1901677: phosphate transmembrane transporter activity	1.11E-03
29	GO:0015117: thiosulfate transmembrane transporter activity	1.11E-03
30	GO:0017022: myosin binding	1.11E-03
31	GO:0043565: sequence-specific DNA binding	1.56E-03
32	GO:0004722: protein serine/threonine phosphatase activity	1.64E-03
33	GO:0005457: GDP-fucose transmembrane transporter activity	1.81E-03
34	GO:0047325: inositol tetrakisphosphate 1-kinase activity	1.81E-03
35	GO:0047274: galactinol-sucrose galactosyltransferase activity	1.81E-03
36	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.81E-03
37	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.81E-03
38	GO:0015141: succinate transmembrane transporter activity	1.81E-03
39	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	1.81E-03
40	GO:0046423: allene-oxide cyclase activity	1.81E-03
41	GO:0004383: guanylate cyclase activity	1.81E-03
42	GO:0008083: growth factor activity	2.27E-03
43	GO:0052654: L-leucine transaminase activity	2.63E-03
44	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	2.63E-03
45	GO:0052655: L-valine transaminase activity	2.63E-03
46	GO:0001653: peptide receptor activity	2.63E-03
47	GO:0015131: oxaloacetate transmembrane transporter activity	2.63E-03
48	GO:0035250: UDP-galactosyltransferase activity	2.63E-03
49	GO:0005460: UDP-glucose transmembrane transporter activity	2.63E-03
50	GO:0005432: calcium:sodium antiporter activity	2.63E-03
51	GO:0052656: L-isoleucine transaminase activity	2.63E-03
52	GO:0016301: kinase activity	3.51E-03
53	GO:0004084: branched-chain-amino-acid transaminase activity	3.54E-03
54	GO:0050378: UDP-glucuronate 4-epimerase activity	3.54E-03
55	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	3.54E-03
56	GO:0004707: MAP kinase activity	3.83E-03
57	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.88E-03
58	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.20E-03
59	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.54E-03
60	GO:0010294: abscisic acid glucosyltransferase activity	4.54E-03
61	GO:0005459: UDP-galactose transmembrane transporter activity	4.54E-03
62	GO:0019139: cytokinin dehydrogenase activity	4.54E-03
63	GO:0004623: phospholipase A2 activity	4.54E-03
64	GO:0080122: AMP transmembrane transporter activity	4.54E-03
65	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	5.63E-03
66	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	5.63E-03
67	GO:0015217: ADP transmembrane transporter activity	6.79E-03
68	GO:0005347: ATP transmembrane transporter activity	6.79E-03
69	GO:0045330: aspartyl esterase activity	7.52E-03
70	GO:0016621: cinnamoyl-CoA reductase activity	8.04E-03
71	GO:0015140: malate transmembrane transporter activity	8.04E-03
72	GO:0015288: porin activity	9.36E-03
73	GO:0016209: antioxidant activity	9.36E-03
74	GO:0015491: cation:cation antiporter activity	9.36E-03
75	GO:0044212: transcription regulatory region DNA binding	9.42E-03
76	GO:0030599: pectinesterase activity	9.61E-03
77	GO:0008308: voltage-gated anion channel activity	1.08E-02
78	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.08E-02
79	GO:0000989: transcription factor activity, transcription factor binding	1.22E-02
80	GO:0004004: ATP-dependent RNA helicase activity	1.34E-02
81	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.41E-02
82	GO:0004674: protein serine/threonine kinase activity	1.46E-02
83	GO:0005545: 1-phosphatidylinositol binding	1.54E-02
84	GO:0015020: glucuronosyltransferase activity	1.54E-02
85	GO:0005096: GTPase activator activity	1.56E-02
86	GO:0015116: sulfate transmembrane transporter activity	1.88E-02
87	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.91E-02
88	GO:0046910: pectinesterase inhibitor activity	1.91E-02
89	GO:0005262: calcium channel activity	2.05E-02
90	GO:0015114: phosphate ion transmembrane transporter activity	2.05E-02
91	GO:0005388: calcium-transporting ATPase activity	2.05E-02
92	GO:0000175: 3'-5'-exoribonuclease activity	2.05E-02
93	GO:0015266: protein channel activity	2.05E-02
94	GO:0005315: inorganic phosphate transmembrane transporter activity	2.05E-02
95	GO:0003677: DNA binding	2.21E-02
96	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.24E-02
97	GO:0017025: TBP-class protein binding	2.43E-02
98	GO:0008146: sulfotransferase activity	2.43E-02
99	GO:0046872: metal ion binding	2.47E-02
100	GO:0004857: enzyme inhibitor activity	2.83E-02
101	GO:0051087: chaperone binding	3.03E-02
102	GO:0005216: ion channel activity	3.03E-02
103	GO:0004540: ribonuclease activity	3.24E-02
104	GO:0016760: cellulose synthase (UDP-forming) activity	3.68E-02
105	GO:0030570: pectate lyase activity	3.68E-02
106	GO:0003727: single-stranded RNA binding	3.90E-02
107	GO:0008514: organic anion transmembrane transporter activity	3.90E-02
108	GO:0018024: histone-lysine N-methyltransferase activity	4.13E-02
109	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.25E-02
110	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.25E-02
111	GO:0030276: clathrin binding	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0032039: integrator complex	0.00E+00
3	GO:0070382: exocytic vesicle	5.15E-04
4	GO:0030133: transport vesicle	1.11E-03
5	GO:0031357: integral component of chloroplast inner membrane	1.11E-03
6	GO:0042170: plastid membrane	1.11E-03
7	GO:0016021: integral component of membrane	1.40E-03
8	GO:0005618: cell wall	1.52E-03
9	GO:0009897: external side of plasma membrane	1.81E-03
10	GO:0046658: anchored component of plasma membrane	1.89E-03
11	GO:0045177: apical part of cell	2.63E-03
12	GO:0016020: membrane	3.44E-03
13	GO:0009527: plastid outer membrane	3.54E-03
14	GO:0009526: plastid envelope	3.54E-03
15	GO:0000178: exosome (RNase complex)	4.54E-03
16	GO:0000793: condensed chromosome	5.63E-03
17	GO:0009505: plant-type cell wall	5.80E-03
18	GO:0000794: condensed nuclear chromosome	8.04E-03
19	GO:0031305: integral component of mitochondrial inner membrane	9.36E-03
20	GO:0046930: pore complex	1.08E-02
21	GO:0045298: tubulin complex	1.22E-02
22	GO:0016604: nuclear body	1.38E-02
23	GO:0031225: anchored component of membrane	1.53E-02
24	GO:0005622: intracellular	1.96E-02
25	GO:0005768: endosome	2.05E-02
26	GO:0009508: plastid chromosome	2.05E-02
27	GO:0005938: cell cortex	2.05E-02
28	GO:0005743: mitochondrial inner membrane	2.17E-02
29	GO:0005886: plasma membrane	2.28E-02
30	GO:0005615: extracellular space	2.40E-02
31	GO:0005905: clathrin-coated pit	3.24E-02
32	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.90E-02
33	GO:0030136: clathrin-coated vesicle	4.13E-02
34	GO:0005802: trans-Golgi network	4.29E-02
35	GO:0000139: Golgi membrane	4.36E-02
36	GO:0005770: late endosome	4.61E-02
37	GO:0009706: chloroplast inner membrane	4.65E-02
38	GO:0005794: Golgi apparatus	4.85E-02