Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G22285

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
2GO:0044843: cell cycle G1/S phase transition0.00E+00
3GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
4GO:0009264: deoxyribonucleotide catabolic process0.00E+00
5GO:0030149: sphingolipid catabolic process0.00E+00
6GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
7GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
8GO:0006412: translation3.67E-51
9GO:0042254: ribosome biogenesis5.86E-15
10GO:0006626: protein targeting to mitochondrion1.14E-08
11GO:0000027: ribosomal large subunit assembly2.45E-06
12GO:0048569: post-embryonic animal organ development3.07E-06
13GO:1902626: assembly of large subunit precursor of preribosome1.11E-05
14GO:0009735: response to cytokinin2.50E-05
15GO:0030150: protein import into mitochondrial matrix7.91E-05
16GO:0001731: formation of translation preinitiation complex1.05E-04
17GO:0009955: adaxial/abaxial pattern specification1.45E-04
18GO:0048453: sepal formation2.57E-04
19GO:0035266: meristem growth2.57E-04
20GO:0031060: regulation of histone methylation2.57E-04
21GO:0006434: seryl-tRNA aminoacylation2.57E-04
22GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.57E-04
23GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.57E-04
24GO:0006407: rRNA export from nucleus2.57E-04
25GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process2.57E-04
26GO:0030163: protein catabolic process3.47E-04
27GO:0010449: root meristem growth4.27E-04
28GO:0009156: ribonucleoside monophosphate biosynthetic process5.68E-04
29GO:2000072: regulation of defense response to fungus, incompatible interaction5.68E-04
30GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine5.68E-04
31GO:0009967: positive regulation of signal transduction5.68E-04
32GO:0051788: response to misfolded protein5.68E-04
33GO:0006435: threonyl-tRNA aminoacylation5.68E-04
34GO:0015786: UDP-glucose transport5.68E-04
35GO:0019752: carboxylic acid metabolic process5.68E-04
36GO:0045859: regulation of protein kinase activity5.68E-04
37GO:0006820: anion transport6.59E-04
38GO:0046686: response to cadmium ion8.15E-04
39GO:0006446: regulation of translational initiation8.40E-04
40GO:0015783: GDP-fucose transport9.22E-04
41GO:0010476: gibberellin mediated signaling pathway9.22E-04
42GO:0042256: mature ribosome assembly9.22E-04
43GO:0010338: leaf formation9.22E-04
44GO:0046168: glycerol-3-phosphate catabolic process9.22E-04
45GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening9.22E-04
46GO:0006413: translational initiation9.39E-04
47GO:0008283: cell proliferation1.22E-03
48GO:0001676: long-chain fatty acid metabolic process1.32E-03
49GO:0046513: ceramide biosynthetic process1.32E-03
50GO:0033617: mitochondrial respiratory chain complex IV assembly1.32E-03
51GO:0070301: cellular response to hydrogen peroxide1.32E-03
52GO:0006241: CTP biosynthetic process1.32E-03
53GO:0072334: UDP-galactose transmembrane transport1.32E-03
54GO:0006072: glycerol-3-phosphate metabolic process1.32E-03
55GO:0009647: skotomorphogenesis1.32E-03
56GO:0006165: nucleoside diphosphate phosphorylation1.32E-03
57GO:0006228: UTP biosynthetic process1.32E-03
58GO:0006164: purine nucleotide biosynthetic process1.32E-03
59GO:0032981: mitochondrial respiratory chain complex I assembly1.32E-03
60GO:0009165: nucleotide biosynthetic process1.76E-03
61GO:0006183: GTP biosynthetic process1.76E-03
62GO:1902183: regulation of shoot apical meristem development2.25E-03
63GO:0045116: protein neddylation2.25E-03
64GO:0019408: dolichol biosynthetic process2.25E-03
65GO:0036065: fucosylation2.25E-03
66GO:0010305: leaf vascular tissue pattern formation2.26E-03
67GO:0000470: maturation of LSU-rRNA2.77E-03
68GO:0043248: proteasome assembly2.77E-03
69GO:0010358: leaf shaping2.77E-03
70GO:0045040: protein import into mitochondrial outer membrane2.77E-03
71GO:0009554: megasporogenesis3.33E-03
72GO:1901001: negative regulation of response to salt stress3.33E-03
73GO:0006458: 'de novo' protein folding3.33E-03
74GO:0000398: mRNA splicing, via spliceosome3.34E-03
75GO:0048528: post-embryonic root development3.93E-03
76GO:0000338: protein deneddylation3.93E-03
77GO:0015937: coenzyme A biosynthetic process3.93E-03
78GO:0009645: response to low light intensity stimulus3.93E-03
79GO:0000028: ribosomal small subunit assembly4.56E-03
80GO:0050821: protein stabilization4.56E-03
81GO:0031540: regulation of anthocyanin biosynthetic process4.56E-03
82GO:0030968: endoplasmic reticulum unfolded protein response5.22E-03
83GO:0043562: cellular response to nitrogen levels5.22E-03
84GO:0010208: pollen wall assembly5.22E-03
85GO:0001558: regulation of cell growth5.22E-03
86GO:0010204: defense response signaling pathway, resistance gene-independent5.22E-03
87GO:0006511: ubiquitin-dependent protein catabolic process5.51E-03
88GO:0006189: 'de novo' IMP biosynthetic process5.92E-03
89GO:0015780: nucleotide-sugar transport5.92E-03
90GO:0098656: anion transmembrane transport5.92E-03
91GO:0048507: meristem development5.92E-03
92GO:0042761: very long-chain fatty acid biosynthetic process6.64E-03
93GO:0045036: protein targeting to chloroplast7.40E-03
94GO:0006298: mismatch repair7.40E-03
95GO:0009870: defense response signaling pathway, resistance gene-dependent7.40E-03
96GO:0048229: gametophyte development8.19E-03
97GO:0010015: root morphogenesis8.19E-03
98GO:0006913: nucleocytoplasmic transport8.19E-03
99GO:0010072: primary shoot apical meristem specification8.19E-03
100GO:0006312: mitotic recombination9.00E-03
101GO:0008643: carbohydrate transport9.29E-03
102GO:0009965: leaf morphogenesis9.66E-03
103GO:2000012: regulation of auxin polar transport9.85E-03
104GO:0010102: lateral root morphogenesis9.85E-03
105GO:0048467: gynoecium development1.07E-02
106GO:0048440: carpel development1.07E-02
107GO:0009933: meristem structural organization1.07E-02
108GO:0090351: seedling development1.16E-02
109GO:0009969: xyloglucan biosynthetic process1.16E-02
110GO:0034976: response to endoplasmic reticulum stress1.25E-02
111GO:0006289: nucleotide-excision repair1.35E-02
112GO:0006487: protein N-linked glycosylation1.35E-02
113GO:0009651: response to salt stress1.35E-02
114GO:0009116: nucleoside metabolic process1.35E-02
115GO:0010073: meristem maintenance1.45E-02
116GO:0051302: regulation of cell division1.45E-02
117GO:0061077: chaperone-mediated protein folding1.55E-02
118GO:0007005: mitochondrion organization1.65E-02
119GO:0015031: protein transport1.67E-02
120GO:0071215: cellular response to abscisic acid stimulus1.76E-02
121GO:0010082: regulation of root meristem growth1.76E-02
122GO:0010584: pollen exine formation1.86E-02
123GO:0048443: stamen development1.86E-02
124GO:0008033: tRNA processing2.09E-02
125GO:0000413: protein peptidyl-prolyl isomerization2.09E-02
126GO:0008360: regulation of cell shape2.20E-02
127GO:0010154: fruit development2.20E-02
128GO:0006520: cellular amino acid metabolic process2.20E-02
129GO:0009845: seed germination2.25E-02
130GO:0042752: regulation of circadian rhythm2.32E-02
131GO:0009556: microsporogenesis2.43E-02
132GO:0010183: pollen tube guidance2.43E-02
133GO:0048825: cotyledon development2.43E-02
134GO:0009749: response to glucose2.43E-02
135GO:0010193: response to ozone2.56E-02
136GO:0010228: vegetative to reproductive phase transition of meristem3.00E-02
137GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.20E-02
138GO:0009739: response to gibberellin3.20E-02
139GO:0009734: auxin-activated signaling pathway3.22E-02
140GO:0007275: multicellular organism development3.47E-02
141GO:0009627: systemic acquired resistance3.59E-02
142GO:0042128: nitrate assimilation3.59E-02
143GO:0009908: flower development3.78E-02
144GO:0016049: cell growth3.87E-02
145GO:0030244: cellulose biosynthetic process4.01E-02
146GO:0010311: lateral root formation4.16E-02
147GO:0009832: plant-type cell wall biogenesis4.16E-02
148GO:0006811: ion transport4.30E-02
149GO:0045087: innate immune response4.75E-02
RankGO TermAdjusted P value
1GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
2GO:0016881: acid-amino acid ligase activity0.00E+00
3GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
4GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
5GO:0033919: glucan 1,3-alpha-glucosidase activity0.00E+00
6GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity0.00E+00
7GO:0004532: exoribonuclease activity0.00E+00
8GO:0015926: glucosidase activity0.00E+00
9GO:0003735: structural constituent of ribosome3.13E-62
10GO:0003729: mRNA binding7.69E-16
11GO:0019843: rRNA binding4.69E-07
12GO:0008097: 5S rRNA binding2.51E-05
13GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity6.33E-05
14GO:0003746: translation elongation factor activity9.85E-05
15GO:0031369: translation initiation factor binding1.05E-04
16GO:0004298: threonine-type endopeptidase activity1.06E-04
17GO:0003743: translation initiation factor activity2.37E-04
18GO:0015288: porin activity2.41E-04
19GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity2.57E-04
20GO:0035614: snRNA stem-loop binding2.57E-04
21GO:0016817: hydrolase activity, acting on acid anhydrides2.57E-04
22GO:0000824: inositol tetrakisphosphate 3-kinase activity2.57E-04
23GO:0004828: serine-tRNA ligase activity2.57E-04
24GO:0004679: AMP-activated protein kinase activity2.57E-04
25GO:0047326: inositol tetrakisphosphate 5-kinase activity2.57E-04
26GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity2.57E-04
27GO:0008308: voltage-gated anion channel activity2.98E-04
28GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity5.68E-04
29GO:0030619: U1 snRNA binding5.68E-04
30GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity5.68E-04
31GO:0050291: sphingosine N-acyltransferase activity5.68E-04
32GO:0004594: pantothenate kinase activity5.68E-04
33GO:0019781: NEDD8 activating enzyme activity5.68E-04
34GO:0004750: ribulose-phosphate 3-epimerase activity5.68E-04
35GO:0005078: MAP-kinase scaffold activity5.68E-04
36GO:0004829: threonine-tRNA ligase activity5.68E-04
37GO:0035241: protein-arginine omega-N monomethyltransferase activity5.68E-04
38GO:0043141: ATP-dependent 5'-3' DNA helicase activity5.68E-04
39GO:0008233: peptidase activity5.76E-04
40GO:0000166: nucleotide binding8.31E-04
41GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity9.22E-04
42GO:0005457: GDP-fucose transmembrane transporter activity9.22E-04
43GO:0008469: histone-arginine N-methyltransferase activity9.22E-04
44GO:0015462: ATPase-coupled protein transmembrane transporter activity9.22E-04
45GO:0032947: protein complex scaffold9.22E-04
46GO:0008253: 5'-nucleotidase activity9.22E-04
47GO:0005515: protein binding9.85E-04
48GO:0004550: nucleoside diphosphate kinase activity1.32E-03
49GO:0004749: ribose phosphate diphosphokinase activity1.32E-03
50GO:0005460: UDP-glucose transmembrane transporter activity1.32E-03
51GO:0070628: proteasome binding1.76E-03
52GO:0008514: organic anion transmembrane transporter activity1.80E-03
53GO:0005459: UDP-galactose transmembrane transporter activity2.25E-03
54GO:0008641: small protein activating enzyme activity2.25E-03
55GO:0045547: dehydrodolichyl diphosphate synthase activity2.25E-03
56GO:0004888: transmembrane signaling receptor activity2.25E-03
57GO:0004040: amidase activity2.25E-03
58GO:0030983: mismatched DNA binding2.77E-03
59GO:0031593: polyubiquitin binding2.77E-03
60GO:0102391: decanoate--CoA ligase activity3.33E-03
61GO:0019887: protein kinase regulator activity3.33E-03
62GO:0004467: long-chain fatty acid-CoA ligase activity3.93E-03
63GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity3.93E-03
64GO:0016831: carboxy-lyase activity3.93E-03
65GO:0005338: nucleotide-sugar transmembrane transporter activity3.93E-03
66GO:0008235: metalloexopeptidase activity3.93E-03
67GO:0030674: protein binding, bridging4.56E-03
68GO:0008135: translation factor activity, RNA binding5.22E-03
69GO:0008417: fucosyltransferase activity5.92E-03
70GO:0000989: transcription factor activity, transcription factor binding5.92E-03
71GO:0003723: RNA binding6.59E-03
72GO:0044183: protein binding involved in protein folding8.19E-03
73GO:0015266: protein channel activity9.85E-03
74GO:0016887: ATPase activity9.86E-03
75GO:0004535: poly(A)-specific ribonuclease activity1.07E-02
76GO:0043130: ubiquitin binding1.35E-02
77GO:0003714: transcription corepressor activity1.35E-02
78GO:0051087: chaperone binding1.45E-02
79GO:0003756: protein disulfide isomerase activity1.86E-02
80GO:0016853: isomerase activity2.32E-02
81GO:0010181: FMN binding2.32E-02
82GO:0005525: GTP binding2.55E-02
83GO:0003684: damaged DNA binding2.93E-02
84GO:0008237: metallopeptidase activity3.06E-02
85GO:0008375: acetylglucosaminyltransferase activity3.59E-02
86GO:0005524: ATP binding4.63E-02
87GO:0003697: single-stranded DNA binding4.75E-02
RankGO TermAdjusted P value
1GO:0005832: chaperonin-containing T-complex0.00E+00
2GO:0022626: cytosolic ribosome8.63E-48
3GO:0022625: cytosolic large ribosomal subunit7.52E-44
4GO:0005840: ribosome4.12E-38
5GO:0005829: cytosol2.54E-28
6GO:0022627: cytosolic small ribosomal subunit2.34E-23
7GO:0005737: cytoplasm3.22E-19
8GO:0005730: nucleolus1.94E-16
9GO:0015934: large ribosomal subunit5.34E-14
10GO:0009506: plasmodesma4.65E-11
11GO:0000502: proteasome complex5.85E-08
12GO:0016020: membrane6.77E-07
13GO:0005773: vacuole1.20E-06
14GO:0005774: vacuolar membrane2.86E-06
15GO:0009507: chloroplast1.60E-05
16GO:0005852: eukaryotic translation initiation factor 3 complex2.49E-05
17GO:0016282: eukaryotic 43S preinitiation complex1.05E-04
18GO:0005839: proteasome core complex1.06E-04
19GO:0015935: small ribosomal subunit1.06E-04
20GO:0005741: mitochondrial outer membrane1.06E-04
21GO:0005618: cell wall1.11E-04
22GO:0033290: eukaryotic 48S preinitiation complex1.45E-04
23GO:0005744: mitochondrial inner membrane presequence translocase complex1.56E-04
24GO:0005712: chiasma2.57E-04
25GO:0030686: 90S preribosome2.57E-04
26GO:0032389: MutLalpha complex2.57E-04
27GO:0046930: pore complex2.98E-04
28GO:0019773: proteasome core complex, alpha-subunit complex2.98E-04
29GO:0005742: mitochondrial outer membrane translocase complex2.98E-04
30GO:0008541: proteasome regulatory particle, lid subcomplex5.76E-04
31GO:0005886: plasma membrane6.67E-04
32GO:0046861: glyoxysomal membrane9.22E-04
33GO:0005853: eukaryotic translation elongation factor 1 complex9.22E-04
34GO:0005743: mitochondrial inner membrane1.04E-03
35GO:0005758: mitochondrial intermembrane space1.15E-03
36GO:0009331: glycerol-3-phosphate dehydrogenase complex1.32E-03
37GO:0000795: synaptonemal complex2.25E-03
38GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.32E-03
39GO:0000974: Prp19 complex2.77E-03
40GO:0031359: integral component of chloroplast outer membrane3.93E-03
41GO:0030529: intracellular ribonucleoprotein complex4.03E-03
42GO:0009514: glyoxysome5.22E-03
43GO:0005685: U1 snRNP5.92E-03
44GO:0008180: COP9 signalosome5.92E-03
45GO:0071011: precatalytic spliceosome6.64E-03
46GO:0015030: Cajal body6.64E-03
47GO:0071013: catalytic step 2 spliceosome8.19E-03
48GO:0048471: perinuclear region of cytoplasm8.19E-03
49GO:0019013: viral nucleocapsid9.85E-03
50GO:0005783: endoplasmic reticulum1.17E-02
51GO:0005769: early endosome1.25E-02
52GO:0005681: spliceosomal complex1.37E-02
53GO:0005834: heterotrimeric G-protein complex1.46E-02
54GO:0000790: nuclear chromatin1.97E-02
55GO:0016592: mediator complex2.68E-02
56GO:0032580: Golgi cisterna membrane2.93E-02
57GO:0005788: endoplasmic reticulum lumen3.46E-02
58GO:0009707: chloroplast outer membrane4.01E-02
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Gene type



Gene DE type