co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G21980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
4	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
5	GO:0046487: glyoxylate metabolic process	0.00E+00
6	GO:0071284: cellular response to lead ion	0.00E+00
7	GO:0015833: peptide transport	0.00E+00
8	GO:0015746: citrate transport	0.00E+00
9	GO:0042430: indole-containing compound metabolic process	0.00E+00
10	GO:0009398: FMN biosynthetic process	0.00E+00
11	GO:0023052: signaling	0.00E+00
12	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
13	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
14	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
15	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
16	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
17	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
18	GO:0006511: ubiquitin-dependent protein catabolic process	2.81E-10
19	GO:0051603: proteolysis involved in cellular protein catabolic process	6.57E-06
20	GO:0008333: endosome to lysosome transport	2.05E-05
21	GO:0045454: cell redox homeostasis	9.04E-05
22	GO:0043248: proteasome assembly	1.80E-04
23	GO:0009554: megasporogenesis	2.44E-04
24	GO:0055114: oxidation-reduction process	2.68E-04
25	GO:0010044: response to aluminum ion	3.16E-04
26	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.16E-04
27	GO:0032365: intracellular lipid transport	3.60E-04
28	GO:0010265: SCF complex assembly	3.60E-04
29	GO:0006474: N-terminal protein amino acid acetylation	3.60E-04
30	GO:0015798: myo-inositol transport	3.60E-04
31	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	3.60E-04
32	GO:0009690: cytokinin metabolic process	3.97E-04
33	GO:0009735: response to cytokinin	5.06E-04
34	GO:0080183: response to photooxidative stress	7.83E-04
35	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	7.83E-04
36	GO:0046939: nucleotide phosphorylation	7.83E-04
37	GO:0009915: phloem sucrose loading	7.83E-04
38	GO:0006212: uracil catabolic process	7.83E-04
39	GO:0019483: beta-alanine biosynthetic process	7.83E-04
40	GO:0051788: response to misfolded protein	7.83E-04
41	GO:0042939: tripeptide transport	7.83E-04
42	GO:0080148: negative regulation of response to water deprivation	7.83E-04
43	GO:0009651: response to salt stress	1.01E-03
44	GO:0043617: cellular response to sucrose starvation	1.27E-03
45	GO:0045793: positive regulation of cell size	1.27E-03
46	GO:0051259: protein oligomerization	1.83E-03
47	GO:0006166: purine ribonucleoside salvage	1.83E-03
48	GO:0009647: skotomorphogenesis	1.83E-03
49	GO:1901332: negative regulation of lateral root development	1.83E-03
50	GO:0006168: adenine salvage	1.83E-03
51	GO:0071786: endoplasmic reticulum tubular network organization	1.83E-03
52	GO:0001676: long-chain fatty acid metabolic process	1.83E-03
53	GO:0032877: positive regulation of DNA endoreduplication	1.83E-03
54	GO:0046836: glycolipid transport	1.83E-03
55	GO:0015992: proton transport	2.25E-03
56	GO:0051781: positive regulation of cell division	2.45E-03
57	GO:0010387: COP9 signalosome assembly	2.45E-03
58	GO:0010363: regulation of plant-type hypersensitive response	2.45E-03
59	GO:0032366: intracellular sterol transport	2.45E-03
60	GO:0042938: dipeptide transport	2.45E-03
61	GO:0046686: response to cadmium ion	2.68E-03
62	GO:0006979: response to oxidative stress	2.96E-03
63	GO:1902183: regulation of shoot apical meristem development	3.14E-03
64	GO:0044209: AMP salvage	3.14E-03
65	GO:0006564: L-serine biosynthetic process	3.14E-03
66	GO:0097428: protein maturation by iron-sulfur cluster transfer	3.14E-03
67	GO:0042147: retrograde transport, endosome to Golgi	3.16E-03
68	GO:0015991: ATP hydrolysis coupled proton transport	3.42E-03
69	GO:0006662: glycerol ether metabolic process	3.68E-03
70	GO:0006555: methionine metabolic process	3.88E-03
71	GO:0048831: regulation of shoot system development	3.88E-03
72	GO:0006574: valine catabolic process	3.88E-03
73	GO:0006623: protein targeting to vacuole	4.25E-03
74	GO:0019509: L-methionine salvage from methylthioadenosine	4.67E-03
75	GO:1901001: negative regulation of response to salt stress	4.67E-03
76	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.67E-03
77	GO:0009612: response to mechanical stimulus	4.67E-03
78	GO:0010189: vitamin E biosynthetic process	4.67E-03
79	GO:0030163: protein catabolic process	5.18E-03
80	GO:0009610: response to symbiotic fungus	5.52E-03
81	GO:0080027: response to herbivore	5.52E-03
82	GO:0048528: post-embryonic root development	5.52E-03
83	GO:0071446: cellular response to salicylic acid stimulus	5.52E-03
84	GO:0000338: protein deneddylation	5.52E-03
85	GO:0006914: autophagy	5.52E-03
86	GO:0009231: riboflavin biosynthetic process	6.41E-03
87	GO:0006102: isocitrate metabolic process	6.41E-03
88	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	6.41E-03
89	GO:0009642: response to light intensity	6.41E-03
90	GO:0009850: auxin metabolic process	6.41E-03
91	GO:0006506: GPI anchor biosynthetic process	6.41E-03
92	GO:0031540: regulation of anthocyanin biosynthetic process	6.41E-03
93	GO:0009615: response to virus	6.58E-03
94	GO:0009627: systemic acquired resistance	7.35E-03
95	GO:0043562: cellular response to nitrogen levels	7.36E-03
96	GO:0006002: fructose 6-phosphate metabolic process	7.36E-03
97	GO:0022900: electron transport chain	7.36E-03
98	GO:0006526: arginine biosynthetic process	7.36E-03
99	GO:0042744: hydrogen peroxide catabolic process	8.20E-03
100	GO:0015780: nucleotide-sugar transport	8.35E-03
101	GO:0098656: anion transmembrane transport	8.35E-03
102	GO:0046685: response to arsenic-containing substance	8.35E-03
103	GO:0009821: alkaloid biosynthetic process	8.35E-03
104	GO:0009245: lipid A biosynthetic process	8.35E-03
105	GO:0080144: amino acid homeostasis	8.35E-03
106	GO:0009817: defense response to fungus, incompatible interaction	8.60E-03
107	GO:0010449: root meristem growth	9.38E-03
108	GO:0010043: response to zinc ion	9.96E-03
109	GO:0000103: sulfate assimilation	1.05E-02
110	GO:0006032: chitin catabolic process	1.05E-02
111	GO:0043069: negative regulation of programmed cell death	1.05E-02
112	GO:0009853: photorespiration	1.09E-02
113	GO:0034599: cellular response to oxidative stress	1.14E-02
114	GO:0072593: reactive oxygen species metabolic process	1.16E-02
115	GO:0015770: sucrose transport	1.16E-02
116	GO:0000272: polysaccharide catabolic process	1.16E-02
117	GO:0048229: gametophyte development	1.16E-02
118	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.21E-02
119	GO:0006790: sulfur compound metabolic process	1.28E-02
120	GO:0006820: anion transport	1.28E-02
121	GO:0016925: protein sumoylation	1.28E-02
122	GO:0006631: fatty acid metabolic process	1.30E-02
123	GO:0006626: protein targeting to mitochondrion	1.40E-02
124	GO:0006807: nitrogen compound metabolic process	1.40E-02
125	GO:0009926: auxin polar transport	1.41E-02
126	GO:0008283: cell proliferation	1.41E-02
127	GO:0009266: response to temperature stimulus	1.52E-02
128	GO:0007034: vacuolar transport	1.52E-02
129	GO:0046854: phosphatidylinositol phosphorylation	1.65E-02
130	GO:0010053: root epidermal cell differentiation	1.65E-02
131	GO:0007030: Golgi organization	1.65E-02
132	GO:0010167: response to nitrate	1.65E-02
133	GO:0006855: drug transmembrane transport	1.65E-02
134	GO:0006636: unsaturated fatty acid biosynthetic process	1.78E-02
135	GO:0006487: protein N-linked glycosylation	1.92E-02
136	GO:0009116: nucleoside metabolic process	1.92E-02
137	GO:0006406: mRNA export from nucleus	1.92E-02
138	GO:0006289: nucleotide-excision repair	1.92E-02
139	GO:0051302: regulation of cell division	2.06E-02
140	GO:0009723: response to ethylene	2.19E-02
141	GO:0051260: protein homooligomerization	2.20E-02
142	GO:0048511: rhythmic process	2.20E-02
143	GO:0010431: seed maturation	2.20E-02
144	GO:0061077: chaperone-mediated protein folding	2.20E-02
145	GO:0003333: amino acid transmembrane transport	2.20E-02
146	GO:0035428: hexose transmembrane transport	2.35E-02
147	GO:0007005: mitochondrion organization	2.35E-02
148	GO:0016192: vesicle-mediated transport	2.55E-02
149	GO:0042742: defense response to bacterium	2.58E-02
150	GO:0010584: pollen exine formation	2.65E-02
151	GO:0019722: calcium-mediated signaling	2.65E-02
152	GO:0010118: stomatal movement	2.97E-02
153	GO:0042631: cellular response to water deprivation	2.97E-02
154	GO:0034220: ion transmembrane transport	2.97E-02
155	GO:0010051: xylem and phloem pattern formation	2.97E-02
156	GO:0009733: response to auxin	3.12E-02
157	GO:0046323: glucose import	3.13E-02
158	GO:0010197: polar nucleus fusion	3.13E-02
159	GO:0009646: response to absence of light	3.30E-02
160	GO:0015986: ATP synthesis coupled proton transport	3.30E-02
161	GO:0009556: microsporogenesis	3.47E-02
162	GO:0010183: pollen tube guidance	3.47E-02
163	GO:0048825: cotyledon development	3.47E-02
164	GO:0080156: mitochondrial mRNA modification	3.64E-02
165	GO:0010193: response to ozone	3.64E-02
166	GO:0006635: fatty acid beta-oxidation	3.64E-02
167	GO:0009751: response to salicylic acid	3.82E-02
168	GO:0015031: protein transport	3.83E-02
169	GO:0009753: response to jasmonic acid	4.24E-02
170	GO:0010286: heat acclimation	4.35E-02
171	GO:0051607: defense response to virus	4.54E-02
172	GO:0000910: cytokinesis	4.54E-02
173	GO:0010150: leaf senescence	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0008752: FMN reductase activity	0.00E+00
2	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
3	GO:0008531: riboflavin kinase activity	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
6	GO:0015197: peptide transporter activity	0.00E+00
7	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
8	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
9	GO:0003796: lysozyme activity	0.00E+00
10	GO:0008777: acetylornithine deacetylase activity	0.00E+00
11	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
12	GO:0004298: threonine-type endopeptidase activity	5.47E-21
13	GO:0008233: peptidase activity	1.14E-11
14	GO:0015035: protein disulfide oxidoreductase activity	1.64E-04
15	GO:0004602: glutathione peroxidase activity	2.44E-04
16	GO:0015137: citrate transmembrane transporter activity	3.60E-04
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	3.60E-04
18	GO:0047326: inositol tetrakisphosphate 5-kinase activity	3.60E-04
19	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	3.60E-04
20	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.60E-04
21	GO:0030544: Hsp70 protein binding	3.60E-04
22	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	3.60E-04
23	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.48E-04
24	GO:0004617: phosphoglycerate dehydrogenase activity	7.83E-04
25	GO:0003919: FMN adenylyltransferase activity	7.83E-04
26	GO:0032934: sterol binding	7.83E-04
27	GO:0042937: tripeptide transporter activity	7.83E-04
28	GO:0005366: myo-inositol:proton symporter activity	7.83E-04
29	GO:0008517: folic acid transporter activity	7.83E-04
30	GO:0004596: peptide alpha-N-acetyltransferase activity	7.83E-04
31	GO:0009055: electron carrier activity	8.16E-04
32	GO:0046961: proton-transporting ATPase activity, rotational mechanism	9.22E-04
33	GO:0004129: cytochrome-c oxidase activity	9.22E-04
34	GO:0008794: arsenate reductase (glutaredoxin) activity	9.22E-04
35	GO:0004601: peroxidase activity	9.68E-04
36	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	1.27E-03
37	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.27E-03
38	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.27E-03
39	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.27E-03
40	GO:0017089: glycolipid transporter activity	1.83E-03
41	GO:0019201: nucleotide kinase activity	1.83E-03
42	GO:0003999: adenine phosphoribosyltransferase activity	1.83E-03
43	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.83E-03
44	GO:0004659: prenyltransferase activity	2.45E-03
45	GO:0015368: calcium:cation antiporter activity	2.45E-03
46	GO:0010011: auxin binding	2.45E-03
47	GO:0042936: dipeptide transporter activity	2.45E-03
48	GO:0051861: glycolipid binding	2.45E-03
49	GO:0015369: calcium:proton antiporter activity	2.45E-03
50	GO:0070628: proteasome binding	2.45E-03
51	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	2.45E-03
52	GO:0004576: oligosaccharyl transferase activity	2.45E-03
53	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.14E-03
54	GO:0004040: amidase activity	3.14E-03
55	GO:0005496: steroid binding	3.14E-03
56	GO:0031386: protein tag	3.14E-03
57	GO:0047134: protein-disulfide reductase activity	3.16E-03
58	GO:0031593: polyubiquitin binding	3.88E-03
59	GO:0031177: phosphopantetheine binding	3.88E-03
60	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	3.88E-03
61	GO:0004791: thioredoxin-disulfide reductase activity	3.96E-03
62	GO:0051920: peroxiredoxin activity	4.67E-03
63	GO:0004017: adenylate kinase activity	4.67E-03
64	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.67E-03
65	GO:0000035: acyl binding	4.67E-03
66	GO:0102391: decanoate--CoA ligase activity	4.67E-03
67	GO:0004656: procollagen-proline 4-dioxygenase activity	4.67E-03
68	GO:0005338: nucleotide-sugar transmembrane transporter activity	5.52E-03
69	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.52E-03
70	GO:0003872: 6-phosphofructokinase activity	5.52E-03
71	GO:0004467: long-chain fatty acid-CoA ligase activity	5.52E-03
72	GO:0015288: porin activity	6.41E-03
73	GO:0016209: antioxidant activity	6.41E-03
74	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	6.41E-03
75	GO:0052747: sinapyl alcohol dehydrogenase activity	6.41E-03
76	GO:0015491: cation:cation antiporter activity	6.41E-03
77	GO:0008308: voltage-gated anion channel activity	7.36E-03
78	GO:0020037: heme binding	7.81E-03
79	GO:0000989: transcription factor activity, transcription factor binding	8.35E-03
80	GO:0016844: strictosidine synthase activity	9.38E-03
81	GO:0050897: cobalt ion binding	9.96E-03
82	GO:0004568: chitinase activity	1.05E-02
83	GO:0008559: xenobiotic-transporting ATPase activity	1.16E-02
84	GO:0008515: sucrose transmembrane transporter activity	1.16E-02
85	GO:0008327: methyl-CpG binding	1.16E-02
86	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.28E-02
87	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.42E-02
88	GO:0008061: chitin binding	1.65E-02
89	GO:0003712: transcription cofactor activity	1.65E-02
90	GO:0051119: sugar transmembrane transporter activity	1.65E-02
91	GO:0051287: NAD binding	1.71E-02
92	GO:0051536: iron-sulfur cluster binding	1.92E-02
93	GO:0031418: L-ascorbic acid binding	1.92E-02
94	GO:0043130: ubiquitin binding	1.92E-02
95	GO:0005528: FK506 binding	1.92E-02
96	GO:0004540: ribonuclease activity	2.20E-02
97	GO:0003713: transcription coactivator activity	3.13E-02
98	GO:0005199: structural constituent of cell wall	3.13E-02
99	GO:0008080: N-acetyltransferase activity	3.13E-02
100	GO:0001085: RNA polymerase II transcription factor binding	3.13E-02
101	GO:0005355: glucose transmembrane transporter activity	3.30E-02
102	GO:0010181: FMN binding	3.30E-02
103	GO:0004872: receptor activity	3.47E-02
104	GO:0008137: NADH dehydrogenase (ubiquinone) activity	3.64E-02
105	GO:0003684: damaged DNA binding	4.17E-02
106	GO:0005507: copper ion binding	4.25E-02
107	GO:0008483: transaminase activity	4.35E-02
108	GO:0008237: metallopeptidase activity	4.35E-02
109	GO:0016597: amino acid binding	4.54E-02
110	GO:0005351: sugar:proton symporter activity	4.57E-02
111	GO:0046872: metal ion binding	4.66E-02
112	GO:0051213: dioxygenase activity	4.72E-02
113	GO:0015250: water channel activity	4.72E-02
114	GO:0008017: microtubule binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0031417: NatC complex	0.00E+00
2	GO:0000502: proteasome complex	6.53E-23
3	GO:0005839: proteasome core complex	5.47E-21
4	GO:0005774: vacuolar membrane	2.23E-10
5	GO:0019773: proteasome core complex, alpha-subunit complex	2.34E-09
6	GO:0005773: vacuole	5.04E-08
7	GO:0005829: cytosol	3.43E-07
8	GO:0000325: plant-type vacuole	8.26E-07
9	GO:0005783: endoplasmic reticulum	3.00E-05
10	GO:0005771: multivesicular body	1.80E-04
11	GO:0030904: retromer complex	1.80E-04
12	GO:0019774: proteasome core complex, beta-subunit complex	3.60E-04
13	GO:0009510: plasmodesmatal desmotubule	3.60E-04
14	GO:0000421: autophagosome membrane	3.97E-04
15	GO:0009705: plant-type vacuole membrane	4.46E-04
16	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	7.83E-04
17	GO:0008541: proteasome regulatory particle, lid subcomplex	9.22E-04
18	GO:0005788: endoplasmic reticulum lumen	9.39E-04
19	GO:0005794: Golgi apparatus	9.60E-04
20	GO:0046861: glyoxysomal membrane	1.27E-03
21	GO:0009530: primary cell wall	1.27E-03
22	GO:0005750: mitochondrial respiratory chain complex III	1.34E-03
23	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.50E-03
24	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.83E-03
25	GO:0071782: endoplasmic reticulum tubular network	1.83E-03
26	GO:0005758: mitochondrial intermembrane space	1.85E-03
27	GO:0005886: plasma membrane	1.86E-03
28	GO:0022626: cytosolic ribosome	2.02E-03
29	GO:0070469: respiratory chain	2.05E-03
30	GO:0045271: respiratory chain complex I	2.05E-03
31	GO:0016471: vacuolar proton-transporting V-type ATPase complex	2.45E-03
32	GO:0031410: cytoplasmic vesicle	2.46E-03
33	GO:0005777: peroxisome	2.90E-03
34	GO:0055035: plastid thylakoid membrane	3.14E-03
35	GO:0005746: mitochondrial respiratory chain	3.14E-03
36	GO:0005945: 6-phosphofructokinase complex	3.14E-03
37	GO:0008250: oligosaccharyltransferase complex	3.14E-03
38	GO:0005747: mitochondrial respiratory chain complex I	4.29E-03
39	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	6.41E-03
40	GO:0005789: endoplasmic reticulum membrane	7.29E-03
41	GO:0046930: pore complex	7.36E-03
42	GO:0009514: glyoxysome	7.36E-03
43	GO:0008180: COP9 signalosome	8.35E-03
44	GO:0031090: organelle membrane	8.35E-03
45	GO:0005759: mitochondrial matrix	9.29E-03
46	GO:0017119: Golgi transport complex	1.05E-02
47	GO:0005665: DNA-directed RNA polymerase II, core complex	1.28E-02
48	GO:0031902: late endosome membrane	1.30E-02
49	GO:0090406: pollen tube	1.41E-02
50	GO:0031966: mitochondrial membrane	1.78E-02
51	GO:0005769: early endosome	1.78E-02
52	GO:0000419: DNA-directed RNA polymerase V complex	1.78E-02
53	GO:0005741: mitochondrial outer membrane	2.20E-02
54	GO:0005732: small nucleolar ribonucleoprotein complex	2.97E-02
55	GO:0009504: cell plate	3.47E-02
56	GO:0005739: mitochondrion	3.59E-02
57	GO:0005737: cytoplasm	4.66E-02