GO Enrichment Analysis of Co-expressed Genes with
AT4G21860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 3 | GO:0009735: response to cytokinin | 5.97E-09 |
| 4 | GO:0006412: translation | 7.35E-06 |
| 5 | GO:0045454: cell redox homeostasis | 8.53E-06 |
| 6 | GO:0043489: RNA stabilization | 5.34E-05 |
| 7 | GO:0044262: cellular carbohydrate metabolic process | 5.34E-05 |
| 8 | GO:0000023: maltose metabolic process | 5.34E-05 |
| 9 | GO:0000025: maltose catabolic process | 5.34E-05 |
| 10 | GO:0043085: positive regulation of catalytic activity | 5.99E-05 |
| 11 | GO:0009409: response to cold | 6.14E-05 |
| 12 | GO:0005983: starch catabolic process | 7.04E-05 |
| 13 | GO:0005976: polysaccharide metabolic process | 1.30E-04 |
| 14 | GO:0006662: glycerol ether metabolic process | 2.81E-04 |
| 15 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.25E-04 |
| 16 | GO:0010731: protein glutathionylation | 3.25E-04 |
| 17 | GO:0006241: CTP biosynthetic process | 3.25E-04 |
| 18 | GO:0006165: nucleoside diphosphate phosphorylation | 3.25E-04 |
| 19 | GO:0006228: UTP biosynthetic process | 3.25E-04 |
| 20 | GO:2000122: negative regulation of stomatal complex development | 4.35E-04 |
| 21 | GO:0010037: response to carbon dioxide | 4.35E-04 |
| 22 | GO:0015976: carbon utilization | 4.35E-04 |
| 23 | GO:0006109: regulation of carbohydrate metabolic process | 4.35E-04 |
| 24 | GO:0006183: GTP biosynthetic process | 4.35E-04 |
| 25 | GO:0042254: ribosome biogenesis | 6.58E-04 |
| 26 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8.05E-04 |
| 27 | GO:0034599: cellular response to oxidative stress | 8.46E-04 |
| 28 | GO:0015979: photosynthesis | 9.86E-04 |
| 29 | GO:0006353: DNA-templated transcription, termination | 1.08E-03 |
| 30 | GO:0032544: plastid translation | 1.23E-03 |
| 31 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.54E-03 |
| 32 | GO:0005982: starch metabolic process | 1.54E-03 |
| 33 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.88E-03 |
| 34 | GO:0009773: photosynthetic electron transport in photosystem I | 1.88E-03 |
| 35 | GO:0010582: floral meristem determinacy | 2.06E-03 |
| 36 | GO:0019253: reductive pentose-phosphate cycle | 2.43E-03 |
| 37 | GO:0010020: chloroplast fission | 2.43E-03 |
| 38 | GO:0010025: wax biosynthetic process | 2.83E-03 |
| 39 | GO:0051017: actin filament bundle assembly | 3.03E-03 |
| 40 | GO:0006289: nucleotide-excision repair | 3.03E-03 |
| 41 | GO:0009411: response to UV | 3.90E-03 |
| 42 | GO:0006012: galactose metabolic process | 3.90E-03 |
| 43 | GO:0000271: polysaccharide biosynthetic process | 4.60E-03 |
| 44 | GO:0042335: cuticle development | 4.60E-03 |
| 45 | GO:0045489: pectin biosynthetic process | 4.84E-03 |
| 46 | GO:0055114: oxidation-reduction process | 4.95E-03 |
| 47 | GO:0015986: ATP synthesis coupled proton transport | 5.09E-03 |
| 48 | GO:0042742: defense response to bacterium | 6.80E-03 |
| 49 | GO:0009911: positive regulation of flower development | 7.22E-03 |
| 50 | GO:0009817: defense response to fungus, incompatible interaction | 8.68E-03 |
| 51 | GO:0010119: regulation of stomatal movement | 9.61E-03 |
| 52 | GO:0009631: cold acclimation | 9.61E-03 |
| 53 | GO:0045087: innate immune response | 1.02E-02 |
| 54 | GO:0016051: carbohydrate biosynthetic process | 1.02E-02 |
| 55 | GO:0005975: carbohydrate metabolic process | 1.16E-02 |
| 56 | GO:0042542: response to hydrogen peroxide | 1.19E-02 |
| 57 | GO:0006855: drug transmembrane transport | 1.37E-02 |
| 58 | GO:0000165: MAPK cascade | 1.40E-02 |
| 59 | GO:0042538: hyperosmotic salinity response | 1.44E-02 |
| 60 | GO:0009585: red, far-red light phototransduction | 1.51E-02 |
| 61 | GO:0009416: response to light stimulus | 1.66E-02 |
| 62 | GO:0006096: glycolytic process | 1.70E-02 |
| 63 | GO:0043086: negative regulation of catalytic activity | 1.70E-02 |
| 64 | GO:0009624: response to nematode | 1.94E-02 |
| 65 | GO:0009793: embryo development ending in seed dormancy | 1.97E-02 |
| 66 | GO:0006396: RNA processing | 1.98E-02 |
| 67 | GO:0006633: fatty acid biosynthetic process | 2.68E-02 |
| 68 | GO:0007623: circadian rhythm | 2.87E-02 |
| 69 | GO:0009451: RNA modification | 2.91E-02 |
| 70 | GO:0006470: protein dephosphorylation | 3.15E-02 |
| 71 | GO:0071555: cell wall organization | 3.36E-02 |
| 72 | GO:0006979: response to oxidative stress | 3.38E-02 |
| 73 | GO:0030154: cell differentiation | 3.65E-02 |
| 74 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 3.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 1.43E-07 |
| 2 | GO:0019843: rRNA binding | 4.27E-07 |
| 3 | GO:0051920: peroxiredoxin activity | 1.16E-05 |
| 4 | GO:0016209: antioxidant activity | 2.11E-05 |
| 5 | GO:0008047: enzyme activator activity | 5.04E-05 |
| 6 | GO:0004134: 4-alpha-glucanotransferase activity | 5.34E-05 |
| 7 | GO:0019203: carbohydrate phosphatase activity | 5.34E-05 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 5.34E-05 |
| 9 | GO:0018708: thiol S-methyltransferase activity | 1.30E-04 |
| 10 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.30E-04 |
| 11 | GO:0004618: phosphoglycerate kinase activity | 1.30E-04 |
| 12 | GO:0010297: heteropolysaccharide binding | 1.30E-04 |
| 13 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.30E-04 |
| 14 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 2.22E-04 |
| 15 | GO:0030267: glyoxylate reductase (NADP) activity | 2.22E-04 |
| 16 | GO:0047134: protein-disulfide reductase activity | 2.40E-04 |
| 17 | GO:0004791: thioredoxin-disulfide reductase activity | 3.02E-04 |
| 18 | GO:0004550: nucleoside diphosphate kinase activity | 3.25E-04 |
| 19 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.96E-04 |
| 20 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 5.52E-04 |
| 21 | GO:2001070: starch binding | 6.76E-04 |
| 22 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 8.05E-04 |
| 23 | GO:0004602: glutathione peroxidase activity | 8.05E-04 |
| 24 | GO:0004034: aldose 1-epimerase activity | 1.08E-03 |
| 25 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.23E-03 |
| 26 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.38E-03 |
| 27 | GO:0015035: protein disulfide oxidoreductase activity | 1.99E-03 |
| 28 | GO:0004089: carbonate dehydratase activity | 2.25E-03 |
| 29 | GO:0031072: heat shock protein binding | 2.25E-03 |
| 30 | GO:0008266: poly(U) RNA binding | 2.43E-03 |
| 31 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.73E-03 |
| 32 | GO:0004857: enzyme inhibitor activity | 3.03E-03 |
| 33 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.68E-03 |
| 34 | GO:0001085: RNA polymerase II transcription factor binding | 4.84E-03 |
| 35 | GO:0004601: peroxidase activity | 5.09E-03 |
| 36 | GO:0050662: coenzyme binding | 5.09E-03 |
| 37 | GO:0016853: isomerase activity | 5.09E-03 |
| 38 | GO:0048038: quinone binding | 5.60E-03 |
| 39 | GO:0051015: actin filament binding | 6.12E-03 |
| 40 | GO:0008237: metallopeptidase activity | 6.66E-03 |
| 41 | GO:0030247: polysaccharide binding | 8.09E-03 |
| 42 | GO:0004222: metalloendopeptidase activity | 9.30E-03 |
| 43 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 9.61E-03 |
| 44 | GO:0016491: oxidoreductase activity | 9.64E-03 |
| 45 | GO:0009055: electron carrier activity | 9.99E-03 |
| 46 | GO:0004364: glutathione transferase activity | 1.19E-02 |
| 47 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.74E-02 |
| 48 | GO:0051082: unfolded protein binding | 1.94E-02 |
| 49 | GO:0030246: carbohydrate binding | 2.23E-02 |
| 50 | GO:0016758: transferase activity, transferring hexosyl groups | 2.24E-02 |
| 51 | GO:0004252: serine-type endopeptidase activity | 2.46E-02 |
| 52 | GO:0003723: RNA binding | 2.89E-02 |
| 53 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.40E-02 |
| 54 | GO:0008168: methyltransferase activity | 3.81E-02 |
| 55 | GO:0003682: chromatin binding | 4.07E-02 |
| 56 | GO:0003729: mRNA binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009941: chloroplast envelope | 1.44E-25 |
| 2 | GO:0009570: chloroplast stroma | 6.26E-24 |
| 3 | GO:0009507: chloroplast | 7.07E-24 |
| 4 | GO:0009579: thylakoid | 2.09E-14 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.06E-13 |
| 6 | GO:0010319: stromule | 2.90E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 3.92E-07 |
| 8 | GO:0009538: photosystem I reaction center | 2.11E-05 |
| 9 | GO:0005840: ribosome | 3.19E-05 |
| 10 | GO:0030093: chloroplast photosystem I | 1.30E-04 |
| 11 | GO:0010287: plastoglobule | 2.25E-04 |
| 12 | GO:0009295: nucleoid | 4.47E-04 |
| 13 | GO:0048046: apoplast | 5.60E-04 |
| 14 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 6.76E-04 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 9.40E-04 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.38E-03 |
| 17 | GO:0000311: plastid large ribosomal subunit | 2.06E-03 |
| 18 | GO:0009508: plastid chromosome | 2.25E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 2.41E-03 |
| 20 | GO:0000312: plastid small ribosomal subunit | 2.43E-03 |
| 21 | GO:0015935: small ribosomal subunit | 3.46E-03 |
| 22 | GO:0015629: actin cytoskeleton | 3.90E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 7.22E-03 |
| 24 | GO:0005667: transcription factor complex | 7.79E-03 |
| 25 | GO:0015934: large ribosomal subunit | 9.61E-03 |
| 26 | GO:0031977: thylakoid lumen | 1.16E-02 |
| 27 | GO:0005856: cytoskeleton | 1.33E-02 |
| 28 | GO:0009706: chloroplast inner membrane | 1.94E-02 |
| 29 | GO:0022627: cytosolic small ribosomal subunit | 3.50E-02 |
| 30 | GO:0005618: cell wall | 3.85E-02 |
| 31 | GO:0009536: plastid | 4.11E-02 |
| 32 | GO:0031969: chloroplast membrane | 4.56E-02 |
| 33 | GO:0022625: cytosolic large ribosomal subunit | 4.73E-02 |