GO Enrichment Analysis of Co-expressed Genes with
AT4G21280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 4.70E-12 |
| 4 | GO:0090391: granum assembly | 6.49E-11 |
| 5 | GO:0010196: nonphotochemical quenching | 1.29E-08 |
| 6 | GO:0018298: protein-chromophore linkage | 7.94E-08 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.01E-07 |
| 8 | GO:0010027: thylakoid membrane organization | 4.17E-06 |
| 9 | GO:0009642: response to light intensity | 6.41E-06 |
| 10 | GO:0010206: photosystem II repair | 1.06E-05 |
| 11 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.53E-05 |
| 12 | GO:1904964: positive regulation of phytol biosynthetic process | 2.53E-05 |
| 13 | GO:0019253: reductive pentose-phosphate cycle | 3.12E-05 |
| 14 | GO:0006729: tetrahydrobiopterin biosynthetic process | 6.44E-05 |
| 15 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.44E-05 |
| 16 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.44E-05 |
| 17 | GO:0009735: response to cytokinin | 7.60E-05 |
| 18 | GO:0071492: cellular response to UV-A | 1.13E-04 |
| 19 | GO:0006000: fructose metabolic process | 1.13E-04 |
| 20 | GO:0071486: cellular response to high light intensity | 2.30E-04 |
| 21 | GO:0009765: photosynthesis, light harvesting | 2.30E-04 |
| 22 | GO:0006109: regulation of carbohydrate metabolic process | 2.30E-04 |
| 23 | GO:0045727: positive regulation of translation | 2.30E-04 |
| 24 | GO:0015994: chlorophyll metabolic process | 2.30E-04 |
| 25 | GO:0010218: response to far red light | 2.81E-04 |
| 26 | GO:0010236: plastoquinone biosynthetic process | 2.95E-04 |
| 27 | GO:0009637: response to blue light | 3.23E-04 |
| 28 | GO:0010114: response to red light | 4.15E-04 |
| 29 | GO:0010189: vitamin E biosynthetic process | 4.36E-04 |
| 30 | GO:0048564: photosystem I assembly | 5.89E-04 |
| 31 | GO:0032544: plastid translation | 6.69E-04 |
| 32 | GO:0006002: fructose 6-phosphate metabolic process | 6.69E-04 |
| 33 | GO:0009245: lipid A biosynthetic process | 7.52E-04 |
| 34 | GO:0019684: photosynthesis, light reaction | 1.01E-03 |
| 35 | GO:0043085: positive regulation of catalytic activity | 1.01E-03 |
| 36 | GO:0000272: polysaccharide catabolic process | 1.01E-03 |
| 37 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.01E-03 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 1.01E-03 |
| 39 | GO:0006006: glucose metabolic process | 1.20E-03 |
| 40 | GO:0006094: gluconeogenesis | 1.20E-03 |
| 41 | GO:0005986: sucrose biosynthetic process | 1.20E-03 |
| 42 | GO:0009658: chloroplast organization | 1.99E-03 |
| 43 | GO:0042742: defense response to bacterium | 2.02E-03 |
| 44 | GO:0009561: megagametogenesis | 2.18E-03 |
| 45 | GO:0042631: cellular response to water deprivation | 2.42E-03 |
| 46 | GO:0042335: cuticle development | 2.42E-03 |
| 47 | GO:0080167: response to karrikin | 2.46E-03 |
| 48 | GO:0006662: glycerol ether metabolic process | 2.55E-03 |
| 49 | GO:0019252: starch biosynthetic process | 2.80E-03 |
| 50 | GO:0032259: methylation | 3.46E-03 |
| 51 | GO:0009627: systemic acquired resistance | 4.06E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 4.21E-03 |
| 53 | GO:0016311: dephosphorylation | 4.36E-03 |
| 54 | GO:0016051: carbohydrate biosynthetic process | 5.31E-03 |
| 55 | GO:0009853: photorespiration | 5.31E-03 |
| 56 | GO:0034599: cellular response to oxidative stress | 5.47E-03 |
| 57 | GO:0030001: metal ion transport | 5.81E-03 |
| 58 | GO:0009611: response to wounding | 6.51E-03 |
| 59 | GO:0009644: response to high light intensity | 6.67E-03 |
| 60 | GO:0045893: positive regulation of transcription, DNA-templated | 7.31E-03 |
| 61 | GO:0006364: rRNA processing | 7.78E-03 |
| 62 | GO:0055085: transmembrane transport | 8.09E-03 |
| 63 | GO:0006096: glycolytic process | 8.74E-03 |
| 64 | GO:0043086: negative regulation of catalytic activity | 8.74E-03 |
| 65 | GO:0006633: fatty acid biosynthetic process | 1.37E-02 |
| 66 | GO:0007623: circadian rhythm | 1.46E-02 |
| 67 | GO:0045490: pectin catabolic process | 1.46E-02 |
| 68 | GO:0010468: regulation of gene expression | 1.66E-02 |
| 69 | GO:0045454: cell redox homeostasis | 2.64E-02 |
| 70 | GO:0009416: response to light stimulus | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 4 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 5 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 6 | GO:0016168: chlorophyll binding | 3.70E-10 |
| 7 | GO:0031409: pigment binding | 3.43E-07 |
| 8 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.53E-05 |
| 9 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.53E-05 |
| 10 | GO:0031072: heat shock protein binding | 2.69E-05 |
| 11 | GO:0047746: chlorophyllase activity | 6.44E-05 |
| 12 | GO:0010297: heteropolysaccharide binding | 6.44E-05 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.44E-05 |
| 14 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 6.44E-05 |
| 15 | GO:0022891: substrate-specific transmembrane transporter activity | 7.16E-05 |
| 16 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.13E-04 |
| 17 | GO:0008453: alanine-glyoxylate transaminase activity | 2.30E-04 |
| 18 | GO:0043495: protein anchor | 2.30E-04 |
| 19 | GO:0031177: phosphopantetheine binding | 3.65E-04 |
| 20 | GO:0042578: phosphoric ester hydrolase activity | 3.65E-04 |
| 21 | GO:0000035: acyl binding | 4.36E-04 |
| 22 | GO:0019899: enzyme binding | 5.11E-04 |
| 23 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 5.89E-04 |
| 24 | GO:0051082: unfolded protein binding | 7.77E-04 |
| 25 | GO:0008047: enzyme activator activity | 9.24E-04 |
| 26 | GO:0019843: rRNA binding | 9.61E-04 |
| 27 | GO:0008266: poly(U) RNA binding | 1.30E-03 |
| 28 | GO:0004857: enzyme inhibitor activity | 1.61E-03 |
| 29 | GO:0005509: calcium ion binding | 1.82E-03 |
| 30 | GO:0030570: pectate lyase activity | 2.06E-03 |
| 31 | GO:0003756: protein disulfide isomerase activity | 2.18E-03 |
| 32 | GO:0047134: protein-disulfide reductase activity | 2.30E-03 |
| 33 | GO:0046872: metal ion binding | 2.30E-03 |
| 34 | GO:0050662: coenzyme binding | 2.68E-03 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 2.68E-03 |
| 36 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.21E-03 |
| 37 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.36E-03 |
| 38 | GO:0003993: acid phosphatase activity | 5.47E-03 |
| 39 | GO:0050661: NADP binding | 5.81E-03 |
| 40 | GO:0051287: NAD binding | 7.22E-03 |
| 41 | GO:0015035: protein disulfide oxidoreductase activity | 1.02E-02 |
| 42 | GO:0016829: lyase activity | 1.23E-02 |
| 43 | GO:0042802: identical protein binding | 1.73E-02 |
| 44 | GO:0008168: methyltransferase activity | 1.94E-02 |
| 45 | GO:0009055: electron carrier activity | 3.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.12E-35 |
| 3 | GO:0009534: chloroplast thylakoid | 2.65E-33 |
| 4 | GO:0009507: chloroplast | 2.31E-30 |
| 5 | GO:0009579: thylakoid | 5.35E-19 |
| 6 | GO:0009941: chloroplast envelope | 8.52E-18 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 4.43E-14 |
| 8 | GO:0009570: chloroplast stroma | 9.56E-14 |
| 9 | GO:0010287: plastoglobule | 3.51E-10 |
| 10 | GO:0030095: chloroplast photosystem II | 9.22E-10 |
| 11 | GO:0031977: thylakoid lumen | 2.15E-09 |
| 12 | GO:0009523: photosystem II | 1.53E-08 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 5.01E-07 |
| 14 | GO:0009522: photosystem I | 1.69E-06 |
| 15 | GO:0019898: extrinsic component of membrane | 1.92E-06 |
| 16 | GO:0009538: photosystem I reaction center | 6.41E-06 |
| 17 | GO:0009783: photosystem II antenna complex | 2.53E-05 |
| 18 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 6.44E-05 |
| 19 | GO:0048046: apoplast | 4.15E-04 |
| 20 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.52E-04 |
| 21 | GO:0030076: light-harvesting complex | 1.40E-03 |
| 22 | GO:0016020: membrane | 1.67E-03 |
| 23 | GO:0042651: thylakoid membrane | 1.72E-03 |
| 24 | GO:0010319: stromule | 3.48E-03 |
| 25 | GO:0016021: integral component of membrane | 5.87E-03 |
| 26 | GO:0005777: peroxisome | 7.31E-03 |
| 27 | GO:0009706: chloroplast inner membrane | 9.95E-03 |
| 28 | GO:0005623: cell | 1.19E-02 |
| 29 | GO:0005840: ribosome | 1.36E-02 |
| 30 | GO:0031969: chloroplast membrane | 2.32E-02 |