co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G19120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0019593: mannitol biosynthetic process	0.00E+00
3	GO:0000038: very long-chain fatty acid metabolic process	2.50E-07
4	GO:0006633: fatty acid biosynthetic process	4.27E-07
5	GO:0010025: wax biosynthetic process	1.09E-06
6	GO:0009833: plant-type primary cell wall biogenesis	1.09E-06
7	GO:0009409: response to cold	1.65E-06
8	GO:0030244: cellulose biosynthetic process	1.69E-06
9	GO:0009631: cold acclimation	2.49E-06
10	GO:0070417: cellular response to cold	4.75E-06
11	GO:0042335: cuticle development	5.64E-06
12	GO:0071555: cell wall organization	2.36E-05
13	GO:0045926: negative regulation of growth	1.10E-04
14	GO:0009610: response to symbiotic fungus	1.45E-04
15	GO:0050829: defense response to Gram-negative bacterium	1.45E-04
16	GO:0009809: lignin biosynthetic process	1.67E-04
17	GO:0009609: response to symbiotic bacterium	2.16E-04
18	GO:0080051: cutin transport	2.16E-04
19	GO:0033481: galacturonate biosynthetic process	2.16E-04
20	GO:0009737: response to abscisic acid	2.75E-04
21	GO:0030148: sphingolipid biosynthetic process	4.49E-04
22	GO:0031407: oxylipin metabolic process	4.81E-04
23	GO:0010289: homogalacturonan biosynthetic process	4.81E-04
24	GO:0015908: fatty acid transport	4.81E-04
25	GO:0043255: regulation of carbohydrate biosynthetic process	4.81E-04
26	GO:1901679: nucleotide transmembrane transport	4.81E-04
27	GO:0015786: UDP-glucose transport	4.81E-04
28	GO:0010353: response to trehalose	4.81E-04
29	GO:0009416: response to light stimulus	4.93E-04
30	GO:0045490: pectin catabolic process	7.08E-04
31	GO:0070588: calcium ion transmembrane transport	7.34E-04
32	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.83E-04
33	GO:0080121: AMP transport	7.83E-04
34	GO:0051211: anisotropic cell growth	7.83E-04
35	GO:0015783: GDP-fucose transport	7.83E-04
36	GO:0006631: fatty acid metabolic process	8.05E-04
37	GO:0006470: protein dephosphorylation	8.67E-04
38	GO:0010468: regulation of gene expression	9.24E-04
39	GO:0031408: oxylipin biosynthetic process	1.09E-03
40	GO:0072334: UDP-galactose transmembrane transport	1.12E-03
41	GO:0006624: vacuolar protein processing	1.12E-03
42	GO:0042538: hyperosmotic salinity response	1.18E-03
43	GO:0046345: abscisic acid catabolic process	1.48E-03
44	GO:0022622: root system development	1.48E-03
45	GO:0006552: leucine catabolic process	1.48E-03
46	GO:0015867: ATP transport	1.48E-03
47	GO:0071585: detoxification of cadmium ion	1.48E-03
48	GO:0010222: stem vascular tissue pattern formation	1.48E-03
49	GO:0042631: cellular response to water deprivation	1.63E-03
50	GO:0006665: sphingolipid metabolic process	1.89E-03
51	GO:0009414: response to water deprivation	1.90E-03
52	GO:0042545: cell wall modification	1.94E-03
53	GO:0009624: response to nematode	2.01E-03
54	GO:0000302: response to reactive oxygen species	2.17E-03
55	GO:0045962: positive regulation of development, heterochronic	2.33E-03
56	GO:0035435: phosphate ion transmembrane transport	2.33E-03
57	GO:0009913: epidermal cell differentiation	2.33E-03
58	GO:1900425: negative regulation of defense response to bacterium	2.33E-03
59	GO:0006574: valine catabolic process	2.33E-03
60	GO:0015866: ADP transport	2.33E-03
61	GO:0009082: branched-chain amino acid biosynthetic process	2.80E-03
62	GO:0098655: cation transmembrane transport	2.80E-03
63	GO:0010555: response to mannitol	2.80E-03
64	GO:0030497: fatty acid elongation	3.30E-03
65	GO:1902074: response to salt	3.30E-03
66	GO:0032880: regulation of protein localization	3.30E-03
67	GO:0007155: cell adhesion	3.82E-03
68	GO:0008610: lipid biosynthetic process	3.82E-03
69	GO:0009819: drought recovery	3.82E-03
70	GO:0042255: ribosome assembly	3.82E-03
71	GO:0006353: DNA-templated transcription, termination	3.82E-03
72	GO:2000070: regulation of response to water deprivation	3.82E-03
73	GO:0010150: leaf senescence	4.02E-03
74	GO:0009832: plant-type cell wall biogenesis	4.27E-03
75	GO:0009827: plant-type cell wall modification	4.38E-03
76	GO:0009834: plant-type secondary cell wall biogenesis	4.48E-03
77	GO:0005975: carbohydrate metabolic process	4.55E-03
78	GO:0098656: anion transmembrane transport	4.95E-03
79	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.95E-03
80	GO:0042761: very long-chain fatty acid biosynthetic process	5.56E-03
81	GO:2000280: regulation of root development	5.56E-03
82	GO:0006949: syncytium formation	6.18E-03
83	GO:0005983: starch catabolic process	7.51E-03
84	GO:0016024: CDP-diacylglycerol biosynthetic process	7.51E-03
85	GO:0005986: sucrose biosynthetic process	8.22E-03
86	GO:0010588: cotyledon vascular tissue pattern formation	8.22E-03
87	GO:2000012: regulation of auxin polar transport	8.22E-03
88	GO:0018107: peptidyl-threonine phosphorylation	8.22E-03
89	GO:0009611: response to wounding	8.45E-03
90	GO:0006952: defense response	8.86E-03
91	GO:0010143: cutin biosynthetic process	8.94E-03
92	GO:0051603: proteolysis involved in cellular protein catabolic process	9.26E-03
93	GO:0009225: nucleotide-sugar metabolic process	9.69E-03
94	GO:0009825: multidimensional cell growth	9.69E-03
95	GO:0006636: unsaturated fatty acid biosynthetic process	1.05E-02
96	GO:0048367: shoot system development	1.09E-02
97	GO:0007017: microtubule-based process	1.21E-02
98	GO:0009695: jasmonic acid biosynthetic process	1.21E-02
99	GO:0009269: response to desiccation	1.29E-02
100	GO:0016998: cell wall macromolecule catabolic process	1.29E-02
101	GO:0030245: cellulose catabolic process	1.37E-02
102	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.46E-02
103	GO:0001944: vasculature development	1.46E-02
104	GO:0048443: stamen development	1.55E-02
105	GO:0008284: positive regulation of cell proliferation	1.64E-02
106	GO:0000226: microtubule cytoskeleton organization	1.74E-02
107	GO:0010268: brassinosteroid homeostasis	1.83E-02
108	GO:0045489: pectin biosynthetic process	1.83E-02
109	GO:0009958: positive gravitropism	1.83E-02
110	GO:0048868: pollen tube development	1.83E-02
111	GO:0009651: response to salt stress	2.11E-02
112	GO:0071554: cell wall organization or biogenesis	2.12E-02
113	GO:0010193: response to ozone	2.12E-02
114	GO:0016132: brassinosteroid biosynthetic process	2.12E-02
115	GO:0007623: circadian rhythm	2.21E-02
116	GO:0010583: response to cyclopentenone	2.23E-02
117	GO:0032502: developmental process	2.23E-02
118	GO:0010090: trichome morphogenesis	2.33E-02
119	GO:0006979: response to oxidative stress	2.39E-02
120	GO:0016125: sterol metabolic process	2.44E-02
121	GO:0019760: glucosinolate metabolic process	2.44E-02
122	GO:0009639: response to red or far red light	2.44E-02
123	GO:0009828: plant-type cell wall loosening	2.44E-02
124	GO:0009739: response to gibberellin	2.47E-02
125	GO:0006904: vesicle docking involved in exocytosis	2.54E-02
126	GO:0009911: positive regulation of flower development	2.76E-02
127	GO:0010029: regulation of seed germination	2.87E-02
128	GO:0055114: oxidation-reduction process	2.97E-02
129	GO:0006974: cellular response to DNA damage stimulus	2.99E-02
130	GO:0010411: xyloglucan metabolic process	3.10E-02
131	GO:0009826: unidimensional cell growth	3.29E-02
132	GO:0018298: protein-chromophore linkage	3.34E-02
133	GO:0006811: ion transport	3.58E-02
134	GO:0048527: lateral root development	3.70E-02
135	GO:0009637: response to blue light	3.95E-02
136	GO:0055085: transmembrane transport	4.17E-02
137	GO:0080167: response to karrikin	4.23E-02
138	GO:0006839: mitochondrial transport	4.33E-02
139	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.38E-02
140	GO:0050832: defense response to fungus	4.45E-02
141	GO:0051707: response to other organism	4.73E-02
142	GO:0009640: photomorphogenesis	4.73E-02
143	GO:0010114: response to red light	4.73E-02
144	GO:0000209: protein polyubiquitination	4.86E-02
145	GO:0042546: cell wall biogenesis	4.86E-02
146	GO:0009644: response to high light intensity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
2	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.78E-10
3	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.78E-10
4	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.78E-10
5	GO:0009922: fatty acid elongase activity	4.08E-07
6	GO:0016629: 12-oxophytodienoate reductase activity	2.19E-06
7	GO:0070330: aromatase activity	8.00E-06
8	GO:0018685: alkane 1-monooxygenase activity	5.37E-05
9	GO:0016760: cellulose synthase (UDP-forming) activity	9.54E-05
10	GO:0052747: sinapyl alcohol dehydrogenase activity	1.85E-04
11	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.01E-04
12	GO:0050521: alpha-glucan, water dikinase activity	2.16E-04
13	GO:0005534: galactose binding	2.16E-04
14	GO:0015245: fatty acid transporter activity	2.16E-04
15	GO:0016759: cellulose synthase activity	2.68E-04
16	GO:0016746: transferase activity, transferring acyl groups	3.17E-04
17	GO:0001047: core promoter binding	4.81E-04
18	GO:0042389: omega-3 fatty acid desaturase activity	4.81E-04
19	GO:0017040: ceramidase activity	4.81E-04
20	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.15E-04
21	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.57E-04
22	GO:0047274: galactinol-sucrose galactosyltransferase activity	7.83E-04
23	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	7.83E-04
24	GO:0005457: GDP-fucose transmembrane transporter activity	7.83E-04
25	GO:0052655: L-valine transaminase activity	1.12E-03
26	GO:0003883: CTP synthase activity	1.12E-03
27	GO:0005460: UDP-glucose transmembrane transporter activity	1.12E-03
28	GO:0052656: L-isoleucine transaminase activity	1.12E-03
29	GO:0052654: L-leucine transaminase activity	1.12E-03
30	GO:0045330: aspartyl esterase activity	1.46E-03
31	GO:0004084: branched-chain-amino-acid transaminase activity	1.48E-03
32	GO:0050378: UDP-glucuronate 4-epimerase activity	1.48E-03
33	GO:0030599: pectinesterase activity	1.86E-03
34	GO:0005459: UDP-galactose transmembrane transporter activity	1.89E-03
35	GO:0010181: FMN binding	1.89E-03
36	GO:0080122: AMP transmembrane transporter activity	1.89E-03
37	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.89E-03
38	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.33E-03
39	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.33E-03
40	GO:0015217: ADP transmembrane transporter activity	2.80E-03
41	GO:0005347: ATP transmembrane transporter activity	2.80E-03
42	GO:0004722: protein serine/threonine phosphatase activity	2.86E-03
43	GO:0016413: O-acetyltransferase activity	2.95E-03
44	GO:0016621: cinnamoyl-CoA reductase activity	3.30E-03
45	GO:0009881: photoreceptor activity	3.30E-03
46	GO:0016209: antioxidant activity	3.82E-03
47	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.38E-03
48	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.46E-03
49	GO:0046872: metal ion binding	6.60E-03
50	GO:0043565: sequence-specific DNA binding	7.34E-03
51	GO:0005262: calcium channel activity	8.22E-03
52	GO:0015114: phosphate ion transmembrane transporter activity	8.22E-03
53	GO:0005388: calcium-transporting ATPase activity	8.22E-03
54	GO:0008083: growth factor activity	8.94E-03
55	GO:0008146: sulfotransferase activity	9.69E-03
56	GO:0031625: ubiquitin protein ligase binding	9.91E-03
57	GO:0004707: MAP kinase activity	1.29E-02
58	GO:0030570: pectate lyase activity	1.46E-02
59	GO:0008810: cellulase activity	1.46E-02
60	GO:0003727: single-stranded RNA binding	1.55E-02
61	GO:0018024: histone-lysine N-methyltransferase activity	1.64E-02
62	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.12E-02
63	GO:0004518: nuclease activity	2.23E-02
64	GO:0004197: cysteine-type endopeptidase activity	2.23E-02
65	GO:0016791: phosphatase activity	2.44E-02
66	GO:0005200: structural constituent of cytoskeleton	2.54E-02
67	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.10E-02
68	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.22E-02
69	GO:0005096: GTPase activator activity	3.46E-02
70	GO:0004842: ubiquitin-protein transferase activity	3.79E-02
71	GO:0003993: acid phosphatase activity	4.07E-02
72	GO:0004185: serine-type carboxypeptidase activity	4.73E-02
73	GO:0019825: oxygen binding	4.80E-02
74	GO:0043621: protein self-association	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0031357: integral component of chloroplast inner membrane	2.19E-06
2	GO:0009505: plant-type cell wall	8.59E-06
3	GO:0005618: cell wall	1.50E-04
4	GO:0046658: anchored component of plasma membrane	1.83E-04
5	GO:0005802: trans-Golgi network	3.23E-04
6	GO:0005768: endosome	4.35E-04
7	GO:0042170: plastid membrane	4.81E-04
8	GO:0005886: plasma membrane	5.92E-04
9	GO:0009897: external side of plasma membrane	7.83E-04
10	GO:0016021: integral component of membrane	1.30E-03
11	GO:0009506: plasmodesma	2.50E-03
12	GO:0005794: Golgi apparatus	2.80E-03
13	GO:0031225: anchored component of membrane	4.45E-03
14	GO:0005615: extracellular space	4.64E-03
15	GO:0045298: tubulin complex	4.95E-03
16	GO:0005783: endoplasmic reticulum	6.08E-03
17	GO:0016020: membrane	6.44E-03
18	GO:0009508: plastid chromosome	8.22E-03
19	GO:0005576: extracellular region	1.05E-02
20	GO:0000139: Golgi membrane	1.19E-02
21	GO:0005789: endoplasmic reticulum membrane	1.46E-02
22	GO:0009941: chloroplast envelope	1.58E-02
23	GO:0005694: chromosome	2.23E-02
24	GO:0000145: exocyst	2.23E-02
25	GO:0071944: cell periphery	2.33E-02
26	GO:0032580: Golgi cisterna membrane	2.44E-02
27	GO:0009295: nucleoid	2.54E-02