co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G18810

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0046677: response to antibiotic	0.00E+00
5	GO:0015882: L-ascorbic acid transport	0.00E+00
6	GO:0019252: starch biosynthetic process	3.19E-07
7	GO:0015979: photosynthesis	1.02E-06
8	GO:0015995: chlorophyll biosynthetic process	1.26E-06
9	GO:0009644: response to high light intensity	5.56E-06
10	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.28E-05
11	GO:0010189: vitamin E biosynthetic process	1.83E-05
12	GO:0007623: circadian rhythm	5.39E-05
13	GO:0018298: protein-chromophore linkage	5.69E-05
14	GO:0010028: xanthophyll cycle	7.07E-05
15	GO:0010362: negative regulation of anion channel activity by blue light	7.07E-05
16	GO:0051775: response to redox state	7.07E-05
17	GO:0071277: cellular response to calcium ion	7.07E-05
18	GO:0031426: polycistronic mRNA processing	7.07E-05
19	GO:0009658: chloroplast organization	1.20E-04
20	GO:0005986: sucrose biosynthetic process	1.23E-04
21	GO:0019253: reductive pentose-phosphate cycle	1.41E-04
22	GO:0010207: photosystem II assembly	1.41E-04
23	GO:0016122: xanthophyll metabolic process	1.70E-04
24	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.70E-04
25	GO:0042853: L-alanine catabolic process	1.70E-04
26	GO:0009915: phloem sucrose loading	1.70E-04
27	GO:0042548: regulation of photosynthesis, light reaction	1.70E-04
28	GO:0000256: allantoin catabolic process	1.70E-04
29	GO:0050992: dimethylallyl diphosphate biosynthetic process	1.70E-04
30	GO:0055114: oxidation-reduction process	2.14E-04
31	GO:0005977: glycogen metabolic process	2.86E-04
32	GO:0006000: fructose metabolic process	2.86E-04
33	GO:0090391: granum assembly	2.86E-04
34	GO:0010136: ureide catabolic process	2.86E-04
35	GO:0071484: cellular response to light intensity	4.15E-04
36	GO:0006107: oxaloacetate metabolic process	4.15E-04
37	GO:0010239: chloroplast mRNA processing	4.15E-04
38	GO:0006145: purine nucleobase catabolic process	4.15E-04
39	GO:2001141: regulation of RNA biosynthetic process	4.15E-04
40	GO:0015994: chlorophyll metabolic process	5.53E-04
41	GO:0071483: cellular response to blue light	5.53E-04
42	GO:0006734: NADH metabolic process	5.53E-04
43	GO:0009902: chloroplast relocation	5.53E-04
44	GO:0010021: amylopectin biosynthetic process	5.53E-04
45	GO:0010117: photoprotection	7.00E-04
46	GO:0009643: photosynthetic acclimation	8.57E-04
47	GO:0009648: photoperiodism	1.02E-03
48	GO:0071470: cellular response to osmotic stress	1.02E-03
49	GO:0009637: response to blue light	1.15E-03
50	GO:0010196: nonphotochemical quenching	1.19E-03
51	GO:0009645: response to low light intensity stimulus	1.19E-03
52	GO:0009642: response to light intensity	1.37E-03
53	GO:0009704: de-etiolation	1.37E-03
54	GO:0010114: response to red light	1.47E-03
55	GO:0006002: fructose 6-phosphate metabolic process	1.56E-03
56	GO:0009657: plastid organization	1.56E-03
57	GO:0098656: anion transmembrane transport	1.76E-03
58	GO:0048507: meristem development	1.76E-03
59	GO:0090333: regulation of stomatal closure	1.76E-03
60	GO:0009638: phototropism	1.97E-03
61	GO:0009641: shade avoidance	2.19E-03
62	GO:0009970: cellular response to sulfate starvation	2.19E-03
63	GO:0006995: cellular response to nitrogen starvation	2.19E-03
64	GO:0006096: glycolytic process	2.31E-03
65	GO:0009773: photosynthetic electron transport in photosystem I	2.41E-03
66	GO:0006352: DNA-templated transcription, initiation	2.41E-03
67	GO:0016485: protein processing	2.41E-03
68	GO:0006094: gluconeogenesis	2.88E-03
69	GO:0009767: photosynthetic electron transport chain	2.88E-03
70	GO:0006829: zinc II ion transport	2.88E-03
71	GO:0006108: malate metabolic process	2.88E-03
72	GO:0006006: glucose metabolic process	2.88E-03
73	GO:0009266: response to temperature stimulus	3.12E-03
74	GO:0010223: secondary shoot formation	3.12E-03
75	GO:0006833: water transport	3.63E-03
76	GO:0006825: copper ion transport	4.17E-03
77	GO:0008299: isoprenoid biosynthetic process	4.17E-03
78	GO:0009768: photosynthesis, light harvesting in photosystem I	4.17E-03
79	GO:0019748: secondary metabolic process	4.73E-03
80	GO:0035428: hexose transmembrane transport	4.73E-03
81	GO:0045893: positive regulation of transcription, DNA-templated	5.31E-03
82	GO:0010118: stomatal movement	5.93E-03
83	GO:0006606: protein import into nucleus	5.93E-03
84	GO:0034220: ion transmembrane transport	5.93E-03
85	GO:0046323: glucose import	6.24E-03
86	GO:0009791: post-embryonic development	6.89E-03
87	GO:0010027: thylakoid membrane organization	9.34E-03
88	GO:0045454: cell redox homeostasis	1.09E-02
89	GO:0006979: response to oxidative stress	1.10E-02
90	GO:0008219: cell death	1.13E-02
91	GO:0000160: phosphorelay signal transduction system	1.17E-02
92	GO:0010218: response to far red light	1.21E-02
93	GO:0009853: photorespiration	1.33E-02
94	GO:0016051: carbohydrate biosynthetic process	1.33E-02
95	GO:0009408: response to heat	1.35E-02
96	GO:0006099: tricarboxylic acid cycle	1.37E-02
97	GO:0034599: cellular response to oxidative stress	1.37E-02
98	GO:0006631: fatty acid metabolic process	1.50E-02
99	GO:0042542: response to hydrogen peroxide	1.55E-02
100	GO:0009409: response to cold	1.60E-02
101	GO:0006810: transport	1.78E-02
102	GO:0031347: regulation of defense response	1.82E-02
103	GO:0005975: carbohydrate metabolic process	1.85E-02
104	GO:0042538: hyperosmotic salinity response	1.87E-02
105	GO:0046686: response to cadmium ion	1.91E-02
106	GO:0006364: rRNA processing	1.97E-02
107	GO:0006417: regulation of translation	2.11E-02
108	GO:0009735: response to cytokinin	2.20E-02
109	GO:0009416: response to light stimulus	2.40E-02
110	GO:0009624: response to nematode	2.53E-02
111	GO:0035556: intracellular signal transduction	2.54E-02
112	GO:0006396: RNA processing	2.58E-02
113	GO:0009737: response to abscisic acid	2.83E-02
114	GO:0055085: transmembrane transport	3.05E-02
115	GO:0009058: biosynthetic process	3.08E-02
116	GO:0006457: protein folding	3.11E-02
117	GO:0042744: hydrogen peroxide catabolic process	3.25E-02
118	GO:0006413: translational initiation	3.55E-02
119	GO:0016036: cellular response to phosphate starvation	3.55E-02
120	GO:0010468: regulation of gene expression	4.23E-02
121	GO:0009414: response to water deprivation	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
2	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
3	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
4	GO:0022883: zinc efflux transmembrane transporter activity	0.00E+00
5	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
6	GO:0009976: tocopherol cyclase activity	0.00E+00
7	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
8	GO:0033840: NDP-glucose-starch glucosyltransferase activity	0.00E+00
9	GO:0045550: geranylgeranyl reductase activity	0.00E+00
10	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
11	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
12	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
13	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
14	GO:0009011: starch synthase activity	4.96E-06
15	GO:0016853: isomerase activity	1.64E-05
16	GO:0035671: enone reductase activity	7.07E-05
17	GO:0047958: glycine:2-oxoglutarate aminotransferase activity	7.07E-05
18	GO:0004008: copper-exporting ATPase activity	7.07E-05
19	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	7.07E-05
20	GO:0008746: NAD(P)+ transhydrogenase activity	7.07E-05
21	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.70E-04
22	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	1.70E-04
23	GO:0019156: isoamylase activity	1.70E-04
24	GO:0070402: NADPH binding	2.86E-04
25	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.86E-04
26	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.86E-04
27	GO:0004373: glycogen (starch) synthase activity	2.86E-04
28	GO:0003913: DNA photolyase activity	2.86E-04
29	GO:0004148: dihydrolipoyl dehydrogenase activity	2.86E-04
30	GO:0050307: sucrose-phosphate phosphatase activity	2.86E-04
31	GO:0030267: glyoxylate reductase (NADP) activity	2.86E-04
32	GO:0004096: catalase activity	2.86E-04
33	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	4.15E-04
34	GO:0048027: mRNA 5'-UTR binding	4.15E-04
35	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	4.15E-04
36	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.15E-04
37	GO:0016851: magnesium chelatase activity	4.15E-04
38	GO:0009882: blue light photoreceptor activity	4.15E-04
39	GO:0001053: plastid sigma factor activity	5.53E-04
40	GO:0008453: alanine-glyoxylate transaminase activity	5.53E-04
41	GO:0016987: sigma factor activity	5.53E-04
42	GO:0051538: 3 iron, 4 sulfur cluster binding	7.00E-04
43	GO:0016168: chlorophyll binding	7.52E-04
44	GO:0042578: phosphoric ester hydrolase activity	8.57E-04
45	GO:0004556: alpha-amylase activity	8.57E-04
46	GO:0016615: malate dehydrogenase activity	8.57E-04
47	GO:0030060: L-malate dehydrogenase activity	1.02E-03
48	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.02E-03
49	GO:0030145: manganese ion binding	1.05E-03
50	GO:0050897: cobalt ion binding	1.05E-03
51	GO:0005375: copper ion transmembrane transporter activity	1.56E-03
52	GO:0051287: NAD binding	1.77E-03
53	GO:0031072: heat shock protein binding	2.88E-03
54	GO:0000155: phosphorelay sensor kinase activity	2.88E-03
55	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.88E-03
56	GO:0005315: inorganic phosphate transmembrane transporter activity	2.88E-03
57	GO:0031409: pigment binding	3.63E-03
58	GO:0016887: ATPase activity	3.75E-03
59	GO:0022891: substrate-specific transmembrane transporter activity	5.02E-03
60	GO:0003727: single-stranded RNA binding	5.32E-03
61	GO:0008514: organic anion transmembrane transporter activity	5.32E-03
62	GO:0010181: FMN binding	6.56E-03
63	GO:0005355: glucose transmembrane transporter activity	6.56E-03
64	GO:0016791: phosphatase activity	8.25E-03
65	GO:0015250: water channel activity	9.34E-03
66	GO:0004721: phosphoprotein phosphatase activity	1.05E-02
67	GO:0050661: NADP binding	1.46E-02
68	GO:0004185: serine-type carboxypeptidase activity	1.59E-02
69	GO:0051537: 2 iron, 2 sulfur cluster binding	1.68E-02
70	GO:0043621: protein self-association	1.68E-02
71	GO:0046872: metal ion binding	1.82E-02
72	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.97E-02
73	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.26E-02
74	GO:0016874: ligase activity	2.42E-02
75	GO:0051082: unfolded protein binding	2.53E-02
76	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.02E-02
77	GO:0030170: pyridoxal phosphate binding	3.19E-02
78	GO:0015144: carbohydrate transmembrane transporter activity	3.37E-02
79	GO:0008565: protein transporter activity	3.37E-02
80	GO:0005351: sugar:proton symporter activity	3.67E-02
81	GO:0042802: identical protein binding	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.67E-23
2	GO:0009535: chloroplast thylakoid membrane	7.78E-14
3	GO:0009941: chloroplast envelope	9.19E-13
4	GO:0009534: chloroplast thylakoid	4.06E-09
5	GO:0009570: chloroplast stroma	1.78E-08
6	GO:0009579: thylakoid	1.40E-06
7	GO:0009706: chloroplast inner membrane	1.85E-05
8	GO:0009782: photosystem I antenna complex	7.07E-05
9	GO:0009515: granal stacked thylakoid	7.07E-05
10	GO:0045254: pyruvate dehydrogenase complex	1.70E-04
11	GO:0009569: chloroplast starch grain	1.70E-04
12	GO:0042651: thylakoid membrane	2.22E-04
13	GO:0010007: magnesium chelatase complex	2.86E-04
14	GO:0010287: plastoglobule	3.66E-04
15	GO:0010319: stromule	6.38E-04
16	GO:0009514: glyoxysome	1.56E-03
17	GO:0042644: chloroplast nucleoid	1.76E-03
18	GO:0030076: light-harvesting complex	3.37E-03
19	GO:0009654: photosystem II oxygen evolving complex	4.17E-03
20	GO:0005759: mitochondrial matrix	4.34E-03
21	GO:0009532: plastid stroma	4.44E-03
22	GO:0048046: apoplast	4.48E-03
23	GO:0005777: peroxisome	5.31E-03
24	GO:0009523: photosystem II	6.89E-03
25	GO:0019898: extrinsic component of membrane	6.89E-03
26	GO:0005778: peroxisomal membrane	8.61E-03
27	GO:0031969: chloroplast membrane	9.13E-03
28	GO:0031977: thylakoid lumen	1.50E-02
29	GO:0005747: mitochondrial respiratory chain complex I	2.26E-02
30	GO:0005739: mitochondrion	2.56E-02
31	GO:0009543: chloroplast thylakoid lumen	2.96E-02
32	GO:0009705: plant-type vacuole membrane	3.73E-02
33	GO:0046658: anchored component of plasma membrane	4.55E-02