co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G18620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0033494: ferulate metabolic process	0.00E+00
3	GO:0010378: temperature compensation of the circadian clock	0.00E+00
4	GO:0009409: response to cold	1.01E-06
5	GO:0000038: very long-chain fatty acid metabolic process	2.59E-06
6	GO:0010371: regulation of gibberellin biosynthetic process	4.63E-06
7	GO:0010143: cutin biosynthetic process	5.23E-06
8	GO:0006633: fatty acid biosynthetic process	6.59E-06
9	GO:0010025: wax biosynthetic process	7.80E-06
10	GO:0042335: cuticle development	2.64E-05
11	GO:0015812: gamma-aminobutyric acid transport	9.88E-05
12	GO:0032958: inositol phosphate biosynthetic process	9.88E-05
13	GO:0080051: cutin transport	9.88E-05
14	GO:0009609: response to symbiotic bacterium	9.88E-05
15	GO:0007623: circadian rhythm	1.22E-04
16	GO:0009631: cold acclimation	1.37E-04
17	GO:0005983: starch catabolic process	1.72E-04
18	GO:0006631: fatty acid metabolic process	1.98E-04
19	GO:0015709: thiosulfate transport	2.32E-04
20	GO:0071422: succinate transmembrane transport	2.32E-04
21	GO:0015908: fatty acid transport	2.32E-04
22	GO:0048838: release of seed from dormancy	2.32E-04
23	GO:0009737: response to abscisic acid	2.46E-04
24	GO:0009809: lignin biosynthetic process	3.31E-04
25	GO:0006020: inositol metabolic process	5.54E-04
26	GO:0015729: oxaloacetate transport	5.54E-04
27	GO:0042631: cellular response to water deprivation	5.80E-04
28	GO:0042752: regulation of circadian rhythm	6.69E-04
29	GO:0010222: stem vascular tissue pattern formation	7.37E-04
30	GO:0009687: abscisic acid metabolic process	7.37E-04
31	GO:0046345: abscisic acid catabolic process	7.37E-04
32	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	7.37E-04
33	GO:0006552: leucine catabolic process	7.37E-04
34	GO:0009649: entrainment of circadian clock	7.37E-04
35	GO:0071585: detoxification of cadmium ion	7.37E-04
36	GO:0000302: response to reactive oxygen species	7.65E-04
37	GO:0048578: positive regulation of long-day photoperiodism, flowering	9.32E-04
38	GO:0071423: malate transmembrane transport	9.32E-04
39	GO:0045487: gibberellin catabolic process	9.32E-04
40	GO:0006574: valine catabolic process	1.14E-03
41	GO:0035435: phosphate ion transmembrane transport	1.14E-03
42	GO:0009913: epidermal cell differentiation	1.14E-03
43	GO:0009082: branched-chain amino acid biosynthetic process	1.36E-03
44	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.36E-03
45	GO:0010555: response to mannitol	1.36E-03
46	GO:0071470: cellular response to osmotic stress	1.36E-03
47	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.36E-03
48	GO:0045926: negative regulation of growth	1.36E-03
49	GO:0018298: protein-chromophore linkage	1.40E-03
50	GO:0009416: response to light stimulus	1.56E-03
51	GO:1902074: response to salt	1.59E-03
52	GO:0010161: red light signaling pathway	1.59E-03
53	GO:0045995: regulation of embryonic development	1.59E-03
54	GO:0008272: sulfate transport	1.59E-03
55	GO:0050829: defense response to Gram-negative bacterium	1.59E-03
56	GO:0009637: response to blue light	1.77E-03
57	GO:0008610: lipid biosynthetic process	1.84E-03
58	GO:0010099: regulation of photomorphogenesis	2.10E-03
59	GO:0042542: response to hydrogen peroxide	2.18E-03
60	GO:0010114: response to red light	2.27E-03
61	GO:0019432: triglyceride biosynthetic process	2.37E-03
62	GO:0042761: very long-chain fatty acid biosynthetic process	2.65E-03
63	GO:2000280: regulation of root development	2.65E-03
64	GO:0042538: hyperosmotic salinity response	2.83E-03
65	GO:0009641: shade avoidance	2.95E-03
66	GO:0016024: CDP-diacylglycerol biosynthetic process	3.57E-03
67	GO:0016042: lipid catabolic process	3.66E-03
68	GO:0009718: anthocyanin-containing compound biosynthetic process	3.89E-03
69	GO:0010588: cotyledon vascular tissue pattern formation	3.89E-03
70	GO:0048440: carpel development	4.22E-03
71	GO:0009414: response to water deprivation	4.39E-03
72	GO:0010030: positive regulation of seed germination	4.57E-03
73	GO:0006071: glycerol metabolic process	4.92E-03
74	GO:0003333: amino acid transmembrane transport	6.03E-03
75	GO:0010431: seed maturation	6.03E-03
76	GO:0009269: response to desiccation	6.03E-03
77	GO:0009411: response to UV	6.82E-03
78	GO:0010150: leaf senescence	7.43E-03
79	GO:0070417: cellular response to cold	7.64E-03
80	GO:0000271: polysaccharide biosynthetic process	8.07E-03
81	GO:0000413: protein peptidyl-prolyl isomerization	8.07E-03
82	GO:0048653: anther development	8.07E-03
83	GO:0009611: response to wounding	8.08E-03
84	GO:0048868: pollen tube development	8.50E-03
85	GO:0010268: brassinosteroid homeostasis	8.50E-03
86	GO:0045489: pectin biosynthetic process	8.50E-03
87	GO:0071472: cellular response to salt stress	8.50E-03
88	GO:0010468: regulation of gene expression	8.86E-03
89	GO:0009749: response to glucose	9.39E-03
90	GO:0019252: starch biosynthetic process	9.39E-03
91	GO:0010183: pollen tube guidance	9.39E-03
92	GO:0016132: brassinosteroid biosynthetic process	9.85E-03
93	GO:0032502: developmental process	1.03E-02
94	GO:0010090: trichome morphogenesis	1.08E-02
95	GO:0016125: sterol metabolic process	1.13E-02
96	GO:0009639: response to red or far red light	1.13E-02
97	GO:0010286: heat acclimation	1.18E-02
98	GO:0006904: vesicle docking involved in exocytosis	1.18E-02
99	GO:0009911: positive regulation of flower development	1.28E-02
100	GO:0010029: regulation of seed germination	1.33E-02
101	GO:0006974: cellular response to DNA damage stimulus	1.38E-02
102	GO:0080167: response to karrikin	1.43E-02
103	GO:0015995: chlorophyll biosynthetic process	1.43E-02
104	GO:0009817: defense response to fungus, incompatible interaction	1.54E-02
105	GO:0048481: plant ovule development	1.54E-02
106	GO:0000160: phosphorelay signal transduction system	1.60E-02
107	GO:0010311: lateral root formation	1.60E-02
108	GO:0010218: response to far red light	1.65E-02
109	GO:0007568: aging	1.71E-02
110	GO:0045087: innate immune response	1.82E-02
111	GO:0016051: carbohydrate biosynthetic process	1.82E-02
112	GO:0071555: cell wall organization	1.92E-02
113	GO:0006839: mitochondrial transport	2.00E-02
114	GO:0006887: exocytosis	2.06E-02
115	GO:0000209: protein polyubiquitination	2.24E-02
116	GO:0050832: defense response to fungus	2.35E-02
117	GO:0009736: cytokinin-activated signaling pathway	2.70E-02
118	GO:0009585: red, far-red light phototransduction	2.70E-02
119	GO:0010224: response to UV-B	2.77E-02
120	GO:0042545: cell wall modification	3.39E-02
121	GO:0009908: flower development	3.39E-02
122	GO:0009735: response to cytokinin	3.43E-02
123	GO:0051726: regulation of cell cycle	3.62E-02
124	GO:0009555: pollen development	3.75E-02
125	GO:0035556: intracellular signal transduction	3.95E-02
126	GO:0006457: protein folding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0036033: mediator complex binding	0.00E+00
2	GO:0010303: limit dextrinase activity	0.00E+00
3	GO:0051060: pullulanase activity	0.00E+00
4	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.51E-08
5	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.51E-08
6	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.51E-08
7	GO:0052747: sinapyl alcohol dehydrogenase activity	5.06E-07
8	GO:0070330: aromatase activity	1.95E-06
9	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.33E-06
10	GO:0018685: alkane 1-monooxygenase activity	1.46E-05
11	GO:0004556: alpha-amylase activity	2.21E-05
12	GO:0009881: photoreceptor activity	4.27E-05
13	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	9.88E-05
14	GO:0015245: fatty acid transporter activity	9.88E-05
15	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	9.88E-05
16	GO:0000829: inositol heptakisphosphate kinase activity	9.88E-05
17	GO:0000828: inositol hexakisphosphate kinase activity	9.88E-05
18	GO:0005534: galactose binding	9.88E-05
19	GO:0031957: very long-chain fatty acid-CoA ligase activity	9.88E-05
20	GO:1901677: phosphate transmembrane transporter activity	2.32E-04
21	GO:0015180: L-alanine transmembrane transporter activity	2.32E-04
22	GO:0001047: core promoter binding	2.32E-04
23	GO:0015117: thiosulfate transmembrane transporter activity	2.32E-04
24	GO:0005310: dicarboxylic acid transmembrane transporter activity	3.86E-04
25	GO:0050734: hydroxycinnamoyltransferase activity	3.86E-04
26	GO:0015141: succinate transmembrane transporter activity	3.86E-04
27	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	3.86E-04
28	GO:0016746: transferase activity, transferring acyl groups	5.40E-04
29	GO:0052656: L-isoleucine transaminase activity	5.54E-04
30	GO:0052654: L-leucine transaminase activity	5.54E-04
31	GO:0052655: L-valine transaminase activity	5.54E-04
32	GO:0015189: L-lysine transmembrane transporter activity	5.54E-04
33	GO:0015181: arginine transmembrane transporter activity	5.54E-04
34	GO:0015131: oxaloacetate transmembrane transporter activity	5.54E-04
35	GO:0005313: L-glutamate transmembrane transporter activity	7.37E-04
36	GO:0004084: branched-chain-amino-acid transaminase activity	7.37E-04
37	GO:0009922: fatty acid elongase activity	9.32E-04
38	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.14E-03
39	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.14E-03
40	GO:0004144: diacylglycerol O-acyltransferase activity	1.36E-03
41	GO:0102391: decanoate--CoA ligase activity	1.36E-03
42	GO:0005085: guanyl-nucleotide exchange factor activity	1.59E-03
43	GO:0004467: long-chain fatty acid-CoA ligase activity	1.59E-03
44	GO:0015140: malate transmembrane transporter activity	1.59E-03
45	GO:0016788: hydrolase activity, acting on ester bonds	1.81E-03
46	GO:0000989: transcription factor activity, transcription factor binding	2.37E-03
47	GO:0052689: carboxylic ester hydrolase activity	2.63E-03
48	GO:0003680: AT DNA binding	3.25E-03
49	GO:0015116: sulfate transmembrane transporter activity	3.57E-03
50	GO:0016758: transferase activity, transferring hexosyl groups	5.24E-03
51	GO:0004707: MAP kinase activity	6.03E-03
52	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.42E-03
53	GO:0015297: antiporter activity	7.09E-03
54	GO:0005199: structural constituent of cell wall	8.50E-03
55	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	8.50E-03
56	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.44E-03
57	GO:0000156: phosphorelay response regulator activity	1.08E-02
58	GO:0016791: phosphatase activity	1.13E-02
59	GO:0019825: oxygen binding	1.23E-02
60	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.65E-02
61	GO:0042803: protein homodimerization activity	1.80E-02
62	GO:0005506: iron ion binding	1.89E-02
63	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.44E-02
64	GO:0015171: amino acid transmembrane transporter activity	2.90E-02
65	GO:0031625: ubiquitin protein ligase binding	2.90E-02
66	GO:0045330: aspartyl esterase activity	2.90E-02
67	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.11E-02
68	GO:0030599: pectinesterase activity	3.32E-02
69	GO:0020037: heme binding	3.40E-02
70	GO:0016740: transferase activity	4.56E-02
71	GO:0005515: protein binding	4.65E-02
72	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.86E-02
73	GO:0046910: pectinesterase inhibitor activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0031357: integral component of chloroplast inner membrane	2.32E-04
2	GO:0009897: external side of plasma membrane	3.86E-04
3	GO:0005811: lipid particle	2.10E-03
4	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	2.10E-03
5	GO:0005783: endoplasmic reticulum	3.46E-03
6	GO:0005654: nucleoplasm	5.24E-03
7	GO:0005737: cytoplasm	5.53E-03
8	GO:0000145: exocyst	1.03E-02
9	GO:0000785: chromatin	1.03E-02
10	GO:0071944: cell periphery	1.08E-02
11	GO:0016021: integral component of membrane	1.96E-02
12	GO:0090406: pollen tube	2.18E-02
13	GO:0031966: mitochondrial membrane	2.57E-02
14	GO:0016607: nuclear speck	3.11E-02
15	GO:0005789: endoplasmic reticulum membrane	3.27E-02