Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G18580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0001881: receptor recycling0.00E+00
3GO:1903647: negative regulation of chlorophyll catabolic process0.00E+00
4GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
5GO:0045905: positive regulation of translational termination2.20E-04
6GO:0045901: positive regulation of translational elongation2.20E-04
7GO:0006452: translational frameshifting2.20E-04
8GO:0009915: phloem sucrose loading2.20E-04
9GO:0034227: tRNA thio-modification3.67E-04
10GO:0044746: amino acid transmembrane export3.67E-04
11GO:0008333: endosome to lysosome transport3.67E-04
12GO:0045454: cell redox homeostasis4.26E-04
13GO:0010731: protein glutathionylation5.28E-04
14GO:0006168: adenine salvage5.28E-04
15GO:0071786: endoplasmic reticulum tubular network organization5.28E-04
16GO:0006166: purine ribonucleoside salvage5.28E-04
17GO:0015991: ATP hydrolysis coupled proton transport5.39E-04
18GO:0006662: glycerol ether metabolic process5.80E-04
19GO:0010387: COP9 signalosome assembly7.02E-04
20GO:0006464: cellular protein modification process8.55E-04
21GO:0006914: autophagy8.55E-04
22GO:0044209: AMP salvage8.88E-04
23GO:0006574: valine catabolic process1.08E-03
24GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.08E-03
25GO:0006555: methionine metabolic process1.08E-03
26GO:0010189: vitamin E biosynthetic process1.29E-03
27GO:0009554: megasporogenesis1.29E-03
28GO:0019509: L-methionine salvage from methylthioadenosine1.29E-03
29GO:0006120: mitochondrial electron transport, NADH to ubiquinone1.29E-03
30GO:0022904: respiratory electron transport chain1.51E-03
31GO:0000338: protein deneddylation1.51E-03
32GO:0009853: photorespiration1.64E-03
33GO:0034599: cellular response to oxidative stress1.71E-03
34GO:0006099: tricarboxylic acid cycle1.71E-03
35GO:0009690: cytokinin metabolic process1.75E-03
36GO:0006102: isocitrate metabolic process1.75E-03
37GO:0006506: GPI anchor biosynthetic process1.75E-03
38GO:0009060: aerobic respiration2.25E-03
39GO:0000103: sulfate assimilation2.80E-03
40GO:0043069: negative regulation of programmed cell death2.80E-03
41GO:0007034: vacuolar transport4.01E-03
42GO:0009266: response to temperature stimulus4.01E-03
43GO:0006636: unsaturated fatty acid biosynthetic process4.67E-03
44GO:0034976: response to endoplasmic reticulum stress4.67E-03
45GO:0006487: protein N-linked glycosylation5.01E-03
46GO:0009116: nucleoside metabolic process5.01E-03
47GO:0055114: oxidation-reduction process5.07E-03
48GO:0051302: regulation of cell division5.36E-03
49GO:0015992: proton transport5.72E-03
50GO:0048511: rhythmic process5.72E-03
51GO:0061077: chaperone-mediated protein folding5.72E-03
52GO:0010089: xylem development6.85E-03
53GO:0019722: calcium-mediated signaling6.85E-03
54GO:0042147: retrograde transport, endosome to Golgi7.25E-03
55GO:0010118: stomatal movement7.65E-03
56GO:0006623: protein targeting to vacuole8.90E-03
57GO:0080156: mitochondrial mRNA modification9.33E-03
58GO:0006511: ubiquitin-dependent protein catabolic process1.05E-02
59GO:0006950: response to stress1.36E-02
60GO:0016192: vesicle-mediated transport1.39E-02
61GO:0006499: N-terminal protein myristoylation1.56E-02
62GO:0009407: toxin catabolic process1.56E-02
63GO:0009640: photomorphogenesis2.07E-02
64GO:0009636: response to toxic substance2.24E-02
65GO:0006855: drug transmembrane transport2.31E-02
66GO:0031347: regulation of defense response2.37E-02
67GO:0009585: red, far-red light phototransduction2.55E-02
68GO:0048316: seed development2.94E-02
69GO:0009624: response to nematode3.28E-02
70GO:0000398: mRNA splicing, via spliceosome3.64E-02
71GO:0042744: hydrogen peroxide catabolic process4.22E-02
72GO:0009790: embryo development4.30E-02
73GO:0006413: translational initiation4.61E-02
74GO:0007623: circadian rhythm4.84E-02
RankGO TermAdjusted P value
1GO:0010176: homogentisate phytyltransferase activity0.00E+00
2GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity9.33E-05
3GO:0019786: Atg8-specific protease activity9.33E-05
4GO:0004129: cytochrome-c oxidase activity1.37E-04
5GO:0004364: glutathione transferase activity1.89E-04
6GO:0008517: folic acid transporter activity2.20E-04
7GO:0019779: Atg8 activating enzyme activity2.20E-04
8GO:0045174: glutathione dehydrogenase (ascorbate) activity3.67E-04
9GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity3.67E-04
10GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity3.67E-04
11GO:0015035: protein disulfide oxidoreductase activity4.91E-04
12GO:0047134: protein-disulfide reductase activity5.00E-04
13GO:0003999: adenine phosphoribosyltransferase activity5.28E-04
14GO:0015186: L-glutamine transmembrane transporter activity5.28E-04
15GO:0004449: isocitrate dehydrogenase (NAD+) activity5.28E-04
16GO:0004791: thioredoxin-disulfide reductase activity6.22E-04
17GO:0004576: oligosaccharyl transferase activity7.02E-04
18GO:0019776: Atg8 ligase activity7.02E-04
19GO:0004659: prenyltransferase activity7.02E-04
20GO:0008137: NADH dehydrogenase (ubiquinone) activity7.11E-04
21GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor8.05E-04
22GO:0008177: succinate dehydrogenase (ubiquinone) activity8.88E-04
23GO:0031386: protein tag8.88E-04
24GO:0051538: 3 iron, 4 sulfur cluster binding8.88E-04
25GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity8.88E-04
26GO:0000104: succinate dehydrogenase activity8.88E-04
27GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.29E-03
28GO:0004602: glutathione peroxidase activity1.29E-03
29GO:0043295: glutathione binding1.51E-03
30GO:0043022: ribosome binding1.75E-03
31GO:0051539: 4 iron, 4 sulfur cluster binding1.86E-03
32GO:0015078: hydrogen ion transmembrane transporter activity2.00E-03
33GO:0045309: protein phosphorylated amino acid binding2.52E-03
34GO:0051287: NAD binding2.54E-03
35GO:0019904: protein domain specific binding3.09E-03
36GO:0046961: proton-transporting ATPase activity, rotational mechanism3.09E-03
37GO:0008559: xenobiotic-transporting ATPase activity3.09E-03
38GO:0008794: arsenate reductase (glutaredoxin) activity3.09E-03
39GO:0005528: FK506 binding5.01E-03
40GO:0003756: protein disulfide isomerase activity6.85E-03
41GO:0004222: metalloendopeptidase activity1.56E-02
42GO:0003746: translation elongation factor activity1.73E-02
43GO:0003697: single-stranded DNA binding1.73E-02
44GO:0009055: electron carrier activity2.10E-02
45GO:0051537: 2 iron, 2 sulfur cluster binding2.18E-02
46GO:0043621: protein self-association2.18E-02
47GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.31E-02
48GO:0016298: lipase activity2.62E-02
49GO:0016746: transferase activity, transferring acyl groups3.35E-02
50GO:0005507: copper ion binding4.92E-02
51GO:0008017: microtubule binding5.00E-02
RankGO TermAdjusted P value
1GO:0005747: mitochondrial respiratory chain complex I2.83E-05
2GO:0000421: autophagosome membrane5.09E-05
3GO:0009510: plasmodesmatal desmotubule9.33E-05
4GO:0045281: succinate dehydrogenase complex2.20E-04
5GO:0045271: respiratory chain complex I3.24E-04
6GO:0031410: cytoplasmic vesicle3.90E-04
7GO:0071782: endoplasmic reticulum tubular network5.28E-04
8GO:0005775: vacuolar lumen5.28E-04
9GO:0033180: proton-transporting V-type ATPase, V1 domain5.28E-04
10GO:0005776: autophagosome7.02E-04
11GO:0033179: proton-transporting V-type ATPase, V0 domain7.02E-04
12GO:0055035: plastid thylakoid membrane8.88E-04
13GO:0008250: oligosaccharyltransferase complex8.88E-04
14GO:0005788: endoplasmic reticulum lumen1.07E-03
15GO:0005771: multivesicular body1.08E-03
16GO:0030904: retromer complex1.08E-03
17GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.75E-03
18GO:0045273: respiratory chain complex II1.75E-03
19GO:0008180: COP9 signalosome2.25E-03
20GO:0031966: mitochondrial membrane2.63E-03
21GO:0005740: mitochondrial envelope2.80E-03
22GO:0005783: endoplasmic reticulum2.91E-03
23GO:0005750: mitochondrial respiratory chain complex III4.01E-03
24GO:0005758: mitochondrial intermembrane space5.01E-03
25GO:0005773: vacuole5.25E-03
26GO:0005789: endoplasmic reticulum membrane7.69E-03
27GO:0005739: mitochondrion8.39E-03
28GO:0009504: cell plate8.90E-03
29GO:0005874: microtubule1.28E-02
30GO:0000325: plant-type vacuole1.62E-02
31GO:0031902: late endosome membrane1.95E-02
32GO:0005794: Golgi apparatus2.17E-02
33GO:0005774: vacuolar membrane2.62E-02
34GO:0005635: nuclear envelope2.68E-02
35GO:0010008: endosome membrane2.94E-02
36GO:0005737: cytoplasm4.12E-02
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Gene type



Gene DE type