co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G17890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007141: male meiosis I	0.00E+00
2	GO:1904526: regulation of microtubule binding	0.00E+00
3	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
4	GO:0009873: ethylene-activated signaling pathway	1.52E-05
5	GO:0010200: response to chitin	1.77E-05
6	GO:0009409: response to cold	4.50E-05
7	GO:0009631: cold acclimation	9.60E-05
8	GO:0035435: phosphate ion transmembrane transport	1.15E-04
9	GO:0045926: negative regulation of growth	1.58E-04
10	GO:0006633: fatty acid biosynthetic process	1.69E-04
11	GO:0070417: cellular response to cold	1.96E-04
12	GO:0009737: response to abscisic acid	2.15E-04
13	GO:0042335: cuticle development	2.19E-04
14	GO:2000070: regulation of response to water deprivation	2.62E-04
15	GO:0009609: response to symbiotic bacterium	2.72E-04
16	GO:0051180: vitamin transport	2.72E-04
17	GO:0030974: thiamine pyrophosphate transport	2.72E-04
18	GO:0009865: pollen tube adhesion	2.72E-04
19	GO:0034620: cellular response to unfolded protein	2.72E-04
20	GO:0080051: cutin transport	2.72E-04
21	GO:0033481: galacturonate biosynthetic process	2.72E-04
22	GO:2000280: regulation of root development	4.62E-04
23	GO:0015908: fatty acid transport	5.99E-04
24	GO:0007130: synaptonemal complex assembly	5.99E-04
25	GO:0006898: receptor-mediated endocytosis	5.99E-04
26	GO:0015893: drug transport	5.99E-04
27	GO:0015786: UDP-glucose transport	5.99E-04
28	GO:1901679: nucleotide transmembrane transport	5.99E-04
29	GO:0015709: thiosulfate transport	5.99E-04
30	GO:0071422: succinate transmembrane transport	5.99E-04
31	GO:0031407: oxylipin metabolic process	5.99E-04
32	GO:0010289: homogalacturonan biosynthetic process	5.99E-04
33	GO:0000038: very long-chain fatty acid metabolic process	6.22E-04
34	GO:0030148: sphingolipid biosynthetic process	6.22E-04
35	GO:0030244: cellulose biosynthetic process	7.33E-04
36	GO:0006811: ion transport	8.29E-04
37	GO:0080121: AMP transport	9.72E-04
38	GO:0051211: anisotropic cell growth	9.72E-04
39	GO:0016045: detection of bacterium	9.72E-04
40	GO:0010359: regulation of anion channel activity	9.72E-04
41	GO:0090630: activation of GTPase activity	9.72E-04
42	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	9.72E-04
43	GO:0015783: GDP-fucose transport	9.72E-04
44	GO:0070588: calcium ion transmembrane transport	1.01E-03
45	GO:0010025: wax biosynthetic process	1.12E-03
46	GO:0009833: plant-type primary cell wall biogenesis	1.12E-03
47	GO:0006839: mitochondrial transport	1.16E-03
48	GO:0007017: microtubule-based process	1.37E-03
49	GO:0015729: oxaloacetate transport	1.39E-03
50	GO:0072334: UDP-galactose transmembrane transport	1.39E-03
51	GO:0010104: regulation of ethylene-activated signaling pathway	1.39E-03
52	GO:0006470: protein dephosphorylation	1.44E-03
53	GO:0031408: oxylipin biosynthetic process	1.50E-03
54	GO:0001944: vasculature development	1.79E-03
55	GO:0006536: glutamate metabolic process	1.86E-03
56	GO:0022622: root system development	1.86E-03
57	GO:0006552: leucine catabolic process	1.86E-03
58	GO:0071585: detoxification of cadmium ion	1.86E-03
59	GO:0015867: ATP transport	1.86E-03
60	GO:0042991: transcription factor import into nucleus	1.86E-03
61	GO:0010222: stem vascular tissue pattern formation	1.86E-03
62	GO:0046345: abscisic acid catabolic process	1.86E-03
63	GO:0042631: cellular response to water deprivation	2.27E-03
64	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	2.37E-03
65	GO:0048359: mucilage metabolic process involved in seed coat development	2.37E-03
66	GO:0071423: malate transmembrane transport	2.37E-03
67	GO:0006873: cellular ion homeostasis	2.37E-03
68	GO:0006665: sphingolipid metabolic process	2.37E-03
69	GO:0045489: pectin biosynthetic process	2.45E-03
70	GO:0048868: pollen tube development	2.45E-03
71	GO:0048232: male gamete generation	2.93E-03
72	GO:0047484: regulation of response to osmotic stress	2.93E-03
73	GO:1900425: negative regulation of defense response to bacterium	2.93E-03
74	GO:0006574: valine catabolic process	2.93E-03
75	GO:0015866: ADP transport	2.93E-03
76	GO:0000302: response to reactive oxygen species	3.02E-03
77	GO:0009624: response to nematode	3.08E-03
78	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.33E-03
79	GO:1901001: negative regulation of response to salt stress	3.52E-03
80	GO:0009082: branched-chain amino acid biosynthetic process	3.52E-03
81	GO:0098655: cation transmembrane transport	3.52E-03
82	GO:0010555: response to mannitol	3.52E-03
83	GO:0009414: response to water deprivation	3.73E-03
84	GO:0009611: response to wounding	3.85E-03
85	GO:0071555: cell wall organization	3.91E-03
86	GO:0030497: fatty acid elongation	4.15E-03
87	GO:0008272: sulfate transport	4.15E-03
88	GO:0050829: defense response to Gram-negative bacterium	4.15E-03
89	GO:0030307: positive regulation of cell growth	4.15E-03
90	GO:1902074: response to salt	4.15E-03
91	GO:0032880: regulation of protein localization	4.15E-03
92	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.15E-03
93	GO:0009610: response to symbiotic fungus	4.15E-03
94	GO:0007155: cell adhesion	4.82E-03
95	GO:0009819: drought recovery	4.82E-03
96	GO:0009415: response to water	4.82E-03
97	GO:0009827: plant-type cell wall modification	5.52E-03
98	GO:0009751: response to salicylic acid	5.60E-03
99	GO:0055085: transmembrane transport	5.63E-03
100	GO:0010150: leaf senescence	6.18E-03
101	GO:0098656: anion transmembrane transport	6.25E-03
102	GO:0015780: nucleotide-sugar transport	6.25E-03
103	GO:0048268: clathrin coat assembly	7.03E-03
104	GO:0042761: very long-chain fatty acid biosynthetic process	7.03E-03
105	GO:0016051: carbohydrate biosynthetic process	7.20E-03
106	GO:0051026: chiasma assembly	7.82E-03
107	GO:0055062: phosphate ion homeostasis	7.82E-03
108	GO:0006631: fatty acid metabolic process	8.57E-03
109	GO:0052544: defense response by callose deposition in cell wall	8.66E-03
110	GO:0051707: response to other organism	9.30E-03
111	GO:0016024: CDP-diacylglycerol biosynthetic process	9.52E-03
112	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.52E-03
113	GO:0009644: response to high light intensity	1.01E-02
114	GO:0010588: cotyledon vascular tissue pattern formation	1.04E-02
115	GO:2000012: regulation of auxin polar transport	1.04E-02
116	GO:0018107: peptidyl-threonine phosphorylation	1.04E-02
117	GO:0048467: gynoecium development	1.13E-02
118	GO:0034605: cellular response to heat	1.13E-02
119	GO:0010143: cutin biosynthetic process	1.13E-02
120	GO:0042538: hyperosmotic salinity response	1.17E-02
121	GO:0009225: nucleotide-sugar metabolic process	1.23E-02
122	GO:0006636: unsaturated fatty acid biosynthetic process	1.33E-02
123	GO:0006355: regulation of transcription, DNA-templated	1.34E-02
124	GO:0009416: response to light stimulus	1.37E-02
125	GO:0009695: jasmonic acid biosynthetic process	1.53E-02
126	GO:0048367: shoot system development	1.54E-02
127	GO:0009651: response to salt stress	1.60E-02
128	GO:0009269: response to desiccation	1.64E-02
129	GO:0042545: cell wall modification	1.74E-02
130	GO:0007131: reciprocal meiotic recombination	1.75E-02
131	GO:0080092: regulation of pollen tube growth	1.75E-02
132	GO:0071456: cellular response to hypoxia	1.75E-02
133	GO:0048443: stamen development	1.97E-02
134	GO:0008284: positive regulation of cell proliferation	2.09E-02
135	GO:0000226: microtubule cytoskeleton organization	2.21E-02
136	GO:0000271: polysaccharide biosynthetic process	2.21E-02
137	GO:0010268: brassinosteroid homeostasis	2.33E-02
138	GO:0009960: endosperm development	2.33E-02
139	GO:0009958: positive gravitropism	2.33E-02
140	GO:0006814: sodium ion transport	2.45E-02
141	GO:0010183: pollen tube guidance	2.58E-02
142	GO:0009790: embryo development	2.62E-02
143	GO:0010193: response to ozone	2.71E-02
144	GO:0016132: brassinosteroid biosynthetic process	2.71E-02
145	GO:0010583: response to cyclopentenone	2.84E-02
146	GO:0016125: sterol metabolic process	3.10E-02
147	GO:0009639: response to red or far red light	3.10E-02
148	GO:0007623: circadian rhythm	3.10E-02
149	GO:0006310: DNA recombination	3.10E-02
150	GO:0045490: pectin catabolic process	3.10E-02
151	GO:0050832: defense response to fungus	3.17E-02
152	GO:0010286: heat acclimation	3.24E-02
153	GO:0051607: defense response to virus	3.38E-02
154	GO:0001666: response to hypoxia	3.52E-02
155	GO:0007166: cell surface receptor signaling pathway	3.55E-02
156	GO:0010029: regulation of seed germination	3.66E-02
157	GO:0009816: defense response to bacterium, incompatible interaction	3.66E-02
158	GO:0010468: regulation of gene expression	3.70E-02
159	GO:0006979: response to oxidative stress	3.92E-02
160	GO:0048481: plant ovule development	4.25E-02
161	GO:0009832: plant-type cell wall biogenesis	4.40E-02
162	GO:0006952: defense response	4.43E-02
163	GO:0009834: plant-type secondary cell wall biogenesis	4.55E-02
164	GO:0006351: transcription, DNA-templated	4.65E-02
165	GO:0048527: lateral root development	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
4	GO:0009922: fatty acid elongase activity	7.47E-07
5	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.29E-06
6	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.29E-06
7	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.29E-06
8	GO:0016629: 12-oxophytodienoate reductase activity	3.41E-06
9	GO:0090422: thiamine pyrophosphate transporter activity	2.72E-04
10	GO:0005534: galactose binding	2.72E-04
11	GO:0015245: fatty acid transporter activity	2.72E-04
12	GO:0015117: thiosulfate transmembrane transporter activity	5.99E-04
13	GO:1901677: phosphate transmembrane transporter activity	5.99E-04
14	GO:0001047: core promoter binding	5.99E-04
15	GO:0042389: omega-3 fatty acid desaturase activity	5.99E-04
16	GO:0017040: ceramidase activity	5.99E-04
17	GO:0070330: aromatase activity	9.72E-04
18	GO:0005310: dicarboxylic acid transmembrane transporter activity	9.72E-04
19	GO:0015141: succinate transmembrane transporter activity	9.72E-04
20	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	9.72E-04
21	GO:0005457: GDP-fucose transmembrane transporter activity	9.72E-04
22	GO:0004722: protein serine/threonine phosphatase activity	1.10E-03
23	GO:0005432: calcium:sodium antiporter activity	1.39E-03
24	GO:0015131: oxaloacetate transmembrane transporter activity	1.39E-03
25	GO:0003883: CTP synthase activity	1.39E-03
26	GO:0005460: UDP-glucose transmembrane transporter activity	1.39E-03
27	GO:0052656: L-isoleucine transaminase activity	1.39E-03
28	GO:0052654: L-leucine transaminase activity	1.39E-03
29	GO:0004351: glutamate decarboxylase activity	1.39E-03
30	GO:0052655: L-valine transaminase activity	1.39E-03
31	GO:0004084: branched-chain-amino-acid transaminase activity	1.86E-03
32	GO:0050378: UDP-glucuronate 4-epimerase activity	1.86E-03
33	GO:0005459: UDP-galactose transmembrane transporter activity	2.37E-03
34	GO:0080122: AMP transmembrane transporter activity	2.37E-03
35	GO:0018685: alkane 1-monooxygenase activity	2.37E-03
36	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.37E-03
37	GO:0043565: sequence-specific DNA binding	2.61E-03
38	GO:0010181: FMN binding	2.63E-03
39	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.93E-03
40	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.93E-03
41	GO:0016746: transferase activity, transferring acyl groups	3.20E-03
42	GO:0005347: ATP transmembrane transporter activity	3.52E-03
43	GO:0015217: ADP transmembrane transporter activity	3.52E-03
44	GO:0005200: structural constituent of cytoskeleton	3.88E-03
45	GO:0015140: malate transmembrane transporter activity	4.15E-03
46	GO:0015491: cation:cation antiporter activity	4.82E-03
47	GO:0016209: antioxidant activity	4.82E-03
48	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.40E-03
49	GO:0008308: voltage-gated anion channel activity	5.52E-03
50	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.52E-03
51	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.65E-03
52	GO:0015297: antiporter activity	5.83E-03
53	GO:0015020: glucuronosyltransferase activity	7.82E-03
54	GO:0005545: 1-phosphatidylinositol binding	7.82E-03
55	GO:0015116: sulfate transmembrane transporter activity	9.52E-03
56	GO:0015114: phosphate ion transmembrane transporter activity	1.04E-02
57	GO:0005388: calcium-transporting ATPase activity	1.04E-02
58	GO:0005262: calcium channel activity	1.04E-02
59	GO:0008083: growth factor activity	1.13E-02
60	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.13E-02
61	GO:0017025: TBP-class protein binding	1.23E-02
62	GO:0044212: transcription regulatory region DNA binding	1.27E-02
63	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.38E-02
64	GO:0045330: aspartyl esterase activity	1.39E-02
65	GO:0016301: kinase activity	1.45E-02
66	GO:0004707: MAP kinase activity	1.64E-02
67	GO:0030599: pectinesterase activity	1.69E-02
68	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.75E-02
69	GO:0016760: cellulose synthase (UDP-forming) activity	1.86E-02
70	GO:0008514: organic anion transmembrane transporter activity	1.97E-02
71	GO:0018024: histone-lysine N-methyltransferase activity	2.09E-02
72	GO:0030276: clathrin binding	2.33E-02
73	GO:0005516: calmodulin binding	2.51E-02
74	GO:0016791: phosphatase activity	3.10E-02
75	GO:0016759: cellulose synthase activity	3.10E-02
76	GO:0016413: O-acetyltransferase activity	3.38E-02
77	GO:0004674: protein serine/threonine kinase activity	3.50E-02
78	GO:0008375: acetylglucosaminyltransferase activity	3.80E-02
79	GO:0046872: metal ion binding	3.86E-02
80	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.93E-02
81	GO:0003677: DNA binding	4.16E-02
82	GO:0005096: GTPase activator activity	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	5.03E-05
2	GO:0016021: integral component of membrane	1.70E-04
3	GO:0070382: exocytic vesicle	2.72E-04
4	GO:0045298: tubulin complex	3.90E-04
5	GO:0031357: integral component of chloroplast inner membrane	5.99E-04
6	GO:0042170: plastid membrane	5.99E-04
7	GO:0009897: external side of plasma membrane	9.72E-04
8	GO:0045177: apical part of cell	1.39E-03
9	GO:0031225: anchored component of membrane	2.34E-03
10	GO:0000793: condensed chromosome	2.93E-03
11	GO:0005768: endosome	3.18E-03
12	GO:0005886: plasma membrane	3.25E-03
13	GO:0005618: cell wall	3.46E-03
14	GO:0016020: membrane	3.66E-03
15	GO:0000794: condensed nuclear chromosome	4.15E-03
16	GO:0005743: mitochondrial inner membrane	5.13E-03
17	GO:0009505: plant-type cell wall	6.10E-03
18	GO:0016604: nuclear body	7.03E-03
19	GO:0005802: trans-Golgi network	8.44E-03
20	GO:0005794: Golgi apparatus	8.47E-03
21	GO:0005938: cell cortex	1.04E-02
22	GO:0005905: clathrin-coated pit	1.64E-02
23	GO:0030136: clathrin-coated vesicle	2.09E-02
24	GO:0000790: nuclear chromatin	2.09E-02
25	GO:0005694: chromosome	2.84E-02
26	GO:0032580: Golgi cisterna membrane	3.10E-02
27	GO:0009506: plasmodesma	3.19E-02
28	GO:0005615: extracellular space	3.47E-02