co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G17080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010336: gibberellic acid homeostasis	0.00E+00
2	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:0071000: response to magnetism	0.00E+00
4	GO:0046460: neutral lipid biosynthetic process	0.00E+00
5	GO:0051776: detection of redox state	0.00E+00
6	GO:0009583: detection of light stimulus	0.00E+00
7	GO:0046294: formaldehyde catabolic process	0.00E+00
8	GO:0010343: singlet oxygen-mediated programmed cell death	1.79E-07
9	GO:0072387: flavin adenine dinucleotide metabolic process	5.48E-05
10	GO:0048438: floral whorl development	5.48E-05
11	GO:0010617: circadian regulation of calcium ion oscillation	1.34E-04
12	GO:0099402: plant organ development	1.34E-04
13	GO:0019441: tryptophan catabolic process to kynurenine	1.34E-04
14	GO:1901529: positive regulation of anion channel activity	1.34E-04
15	GO:0071492: cellular response to UV-A	2.28E-04
16	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.28E-04
17	GO:1902448: positive regulation of shade avoidance	2.28E-04
18	GO:1901672: positive regulation of systemic acquired resistance	2.28E-04
19	GO:1901332: negative regulation of lateral root development	3.33E-04
20	GO:0006624: vacuolar protein processing	3.33E-04
21	GO:1902347: response to strigolactone	4.45E-04
22	GO:0034613: cellular protein localization	4.45E-04
23	GO:0010109: regulation of photosynthesis	4.45E-04
24	GO:0071486: cellular response to high light intensity	4.45E-04
25	GO:0009765: photosynthesis, light harvesting	4.45E-04
26	GO:0051567: histone H3-K9 methylation	4.45E-04
27	GO:0006749: glutathione metabolic process	4.45E-04
28	GO:0000304: response to singlet oxygen	5.66E-04
29	GO:0010117: photoprotection	5.66E-04
30	GO:0046283: anthocyanin-containing compound metabolic process	5.66E-04
31	GO:0060918: auxin transport	6.92E-04
32	GO:0016458: gene silencing	6.92E-04
33	GO:0010304: PSII associated light-harvesting complex II catabolic process	6.92E-04
34	GO:0016070: RNA metabolic process	6.92E-04
35	GO:0031053: primary miRNA processing	6.92E-04
36	GO:1901371: regulation of leaf morphogenesis	6.92E-04
37	GO:0010076: maintenance of floral meristem identity	8.25E-04
38	GO:0010016: shoot system morphogenesis	8.25E-04
39	GO:0010310: regulation of hydrogen peroxide metabolic process	8.25E-04
40	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	8.25E-04
41	GO:0034389: lipid particle organization	8.25E-04
42	GO:0051510: regulation of unidimensional cell growth	9.62E-04
43	GO:0009704: de-etiolation	1.11E-03
44	GO:0045292: mRNA cis splicing, via spliceosome	1.11E-03
45	GO:0010928: regulation of auxin mediated signaling pathway	1.11E-03
46	GO:0015780: nucleotide-sugar transport	1.41E-03
47	GO:0019432: triglyceride biosynthetic process	1.41E-03
48	GO:0051603: proteolysis involved in cellular protein catabolic process	1.47E-03
49	GO:1900426: positive regulation of defense response to bacterium	1.58E-03
50	GO:0009638: phototropism	1.58E-03
51	GO:0010582: floral meristem determinacy	2.11E-03
52	GO:0010075: regulation of meristem growth	2.30E-03
53	GO:0009785: blue light signaling pathway	2.30E-03
54	GO:0009266: response to temperature stimulus	2.49E-03
55	GO:0006071: glycerol metabolic process	2.90E-03
56	GO:0000162: tryptophan biosynthetic process	2.90E-03
57	GO:2000377: regulation of reactive oxygen species metabolic process	3.11E-03
58	GO:0007017: microtubule-based process	3.32E-03
59	GO:0006306: DNA methylation	3.54E-03
60	GO:0009693: ethylene biosynthetic process	4.00E-03
61	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.47E-03
62	GO:0010118: stomatal movement	4.71E-03
63	GO:0009958: positive gravitropism	4.96E-03
64	GO:0006520: cellular amino acid metabolic process	4.96E-03
65	GO:0042752: regulation of circadian rhythm	5.22E-03
66	GO:0009646: response to absence of light	5.22E-03
67	GO:0009851: auxin biosynthetic process	5.48E-03
68	GO:0007264: small GTPase mediated signal transduction	6.00E-03
69	GO:0016579: protein deubiquitination	7.11E-03
70	GO:0042128: nitrate assimilation	7.99E-03
71	GO:0018298: protein-chromophore linkage	8.91E-03
72	GO:0032259: methylation	9.24E-03
73	GO:0016042: lipid catabolic process	9.38E-03
74	GO:0009407: toxin catabolic process	9.54E-03
75	GO:0010218: response to far red light	9.54E-03
76	GO:0009910: negative regulation of flower development	9.86E-03
77	GO:0009637: response to blue light	1.05E-02
78	GO:0010114: response to red light	1.26E-02
79	GO:0009640: photomorphogenesis	1.26E-02
80	GO:0009644: response to high light intensity	1.33E-02
81	GO:0008643: carbohydrate transport	1.33E-02
82	GO:0009636: response to toxic substance	1.37E-02
83	GO:0000165: MAPK cascade	1.44E-02
84	GO:0006857: oligopeptide transport	1.63E-02
85	GO:0006417: regulation of translation	1.67E-02
86	GO:0009611: response to wounding	1.76E-02
87	GO:0048367: shoot system development	1.79E-02
88	GO:0009742: brassinosteroid mediated signaling pathway	2.08E-02
89	GO:0000398: mRNA splicing, via spliceosome	2.21E-02
90	GO:0009058: biosynthetic process	2.43E-02
91	GO:0007623: circadian rhythm	2.94E-02
92	GO:0010150: leaf senescence	2.94E-02
93	GO:0006508: proteolysis	2.94E-02
94	GO:0006470: protein dephosphorylation	3.24E-02
95	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	3.80E-02
96	GO:0009658: chloroplast organization	4.01E-02
97	GO:0009723: response to ethylene	4.45E-02
98	GO:0048366: leaf development	4.51E-02
99	GO:0080167: response to karrikin	4.68E-02
100	GO:0046777: protein autophosphorylation	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
2	GO:0008170: N-methyltransferase activity	0.00E+00
3	GO:0033947: mannosylglycoprotein endo-beta-mannosidase activity	0.00E+00
4	GO:0009008: DNA-methyltransferase activity	0.00E+00
5	GO:0004848: ureidoglycolate hydrolase activity	6.89E-07
6	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	5.48E-05
7	GO:0033984: indole-3-glycerol-phosphate lyase activity	5.48E-05
8	GO:0004061: arylformamidase activity	1.34E-04
9	GO:0000900: translation repressor activity, nucleic acid binding	2.28E-04
10	GO:0019003: GDP binding	2.28E-04
11	GO:0000339: RNA cap binding	3.33E-04
12	GO:0009882: blue light photoreceptor activity	3.33E-04
13	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.45E-04
14	GO:0004834: tryptophan synthase activity	4.45E-04
15	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	6.92E-04
16	GO:0004144: diacylglycerol O-acyltransferase activity	8.25E-04
17	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	8.25E-04
18	GO:0008143: poly(A) binding	9.62E-04
19	GO:0005338: nucleotide-sugar transmembrane transporter activity	9.62E-04
20	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.11E-03
21	GO:0071949: FAD binding	1.41E-03
22	GO:0001055: RNA polymerase II activity	1.58E-03
23	GO:0004864: protein phosphatase inhibitor activity	1.75E-03
24	GO:0022857: transmembrane transporter activity	1.89E-03
25	GO:0001054: RNA polymerase I activity	1.93E-03
26	GO:0004860: protein kinase inhibitor activity	1.93E-03
27	GO:0001056: RNA polymerase III activity	2.11E-03
28	GO:0031072: heat shock protein binding	2.30E-03
29	GO:0004175: endopeptidase activity	2.49E-03
30	GO:0004176: ATP-dependent peptidase activity	3.54E-03
31	GO:0008168: methyltransferase activity	5.08E-03
32	GO:0016788: hydrolase activity, acting on ester bonds	5.38E-03
33	GO:0004872: receptor activity	5.48E-03
34	GO:0004843: thiol-dependent ubiquitin-specific protease activity	5.74E-03
35	GO:0004197: cysteine-type endopeptidase activity	6.00E-03
36	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.27E-03
37	GO:0008483: transaminase activity	6.83E-03
38	GO:0008237: metallopeptidase activity	6.83E-03
39	GO:0052689: carboxylic ester hydrolase activity	7.22E-03
40	GO:0016168: chlorophyll binding	7.69E-03
41	GO:0004806: triglyceride lipase activity	8.29E-03
42	GO:0004222: metalloendopeptidase activity	9.54E-03
43	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.12E-02
44	GO:0004364: glutathione transferase activity	1.22E-02
45	GO:0004185: serine-type carboxypeptidase activity	1.26E-02
46	GO:0051287: NAD binding	1.44E-02
47	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.55E-02
48	GO:0003777: microtubule motor activity	1.67E-02
49	GO:0051082: unfolded protein binding	1.99E-02
50	GO:0005515: protein binding	2.19E-02
51	GO:0030170: pyridoxal phosphate binding	2.52E-02
52	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.57E-02
53	GO:0015297: antiporter activity	2.85E-02
54	GO:0042802: identical protein binding	3.49E-02
55	GO:0046982: protein heterodimerization activity	3.96E-02
56	GO:0046983: protein dimerization activity	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0030427: site of polarized growth	0.00E+00
3	GO:0005845: mRNA cap binding complex	5.48E-05
4	GO:0005846: nuclear cap binding complex	1.34E-04
5	GO:0016605: PML body	2.28E-04
6	GO:0000323: lytic vacuole	3.33E-04
7	GO:0030286: dynein complex	4.45E-04
8	GO:0005811: lipid particle	1.26E-03
9	GO:0016604: nuclear body	1.58E-03
10	GO:0005875: microtubule associated complex	2.90E-03
11	GO:0000419: DNA-directed RNA polymerase V complex	2.90E-03
12	GO:0042651: thylakoid membrane	3.32E-03
13	GO:0009523: photosystem II	5.48E-03
14	GO:0019005: SCF ubiquitin ligase complex	8.91E-03
15	GO:0005819: spindle	1.12E-02
16	GO:0005737: cytoplasm	1.88E-02
17	GO:0009535: chloroplast thylakoid membrane	1.98E-02
18	GO:0005654: nucleoplasm	2.29E-02
19	GO:0009507: chloroplast	3.01E-02
20	GO:0005615: extracellular space	3.19E-02