co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16515

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071475: cellular hyperosmotic salinity response	0.00E+00
2	GO:1904526: regulation of microtubule binding	0.00E+00
3	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
4	GO:0010412: mannan metabolic process	0.00E+00
5	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
6	GO:0009873: ethylene-activated signaling pathway	1.72E-09
7	GO:2000070: regulation of response to water deprivation	1.58E-05
8	GO:0009631: cold acclimation	2.30E-05
9	GO:0009737: response to abscisic acid	3.25E-05
10	GO:0042335: cuticle development	3.50E-05
11	GO:0042631: cellular response to water deprivation	3.50E-05
12	GO:0010104: regulation of ethylene-activated signaling pathway	5.35E-05
13	GO:0000038: very long-chain fatty acid metabolic process	6.73E-05
14	GO:0009409: response to cold	8.36E-05
15	GO:0010200: response to chitin	9.01E-05
16	GO:0042991: transcription factor import into nucleus	9.42E-05
17	GO:0010025: wax biosynthetic process	1.70E-04
18	GO:0035435: phosphate ion transmembrane transport	2.10E-04
19	GO:0006355: regulation of transcription, DNA-templated	2.51E-04
20	GO:0045926: negative regulation of growth	2.83E-04
21	GO:0006631: fatty acid metabolic process	3.87E-04
22	GO:0009865: pollen tube adhesion	3.97E-04
23	GO:0080051: cutin transport	3.97E-04
24	GO:0009609: response to symbiotic bacterium	3.97E-04
25	GO:1902265: abscisic acid homeostasis	3.97E-04
26	GO:0080167: response to karrikin	4.32E-04
27	GO:0009819: drought recovery	4.58E-04
28	GO:0006351: transcription, DNA-templated	5.01E-04
29	GO:0009809: lignin biosynthetic process	6.99E-04
30	GO:0019760: glucosinolate metabolic process	8.40E-04
31	GO:1901679: nucleotide transmembrane transport	8.60E-04
32	GO:0015786: UDP-glucose transport	8.60E-04
33	GO:0010507: negative regulation of autophagy	8.60E-04
34	GO:0015709: thiosulfate transport	8.60E-04
35	GO:0071422: succinate transmembrane transport	8.60E-04
36	GO:0031407: oxylipin metabolic process	8.60E-04
37	GO:0010289: homogalacturonan biosynthetic process	8.60E-04
38	GO:0048569: post-embryonic animal organ development	8.60E-04
39	GO:0015908: fatty acid transport	8.60E-04
40	GO:0006898: receptor-mediated endocytosis	8.60E-04
41	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.21E-03
42	GO:0009414: response to water deprivation	1.24E-03
43	GO:0018107: peptidyl-threonine phosphorylation	1.37E-03
44	GO:0080121: AMP transport	1.40E-03
45	GO:0016045: detection of bacterium	1.40E-03
46	GO:0009062: fatty acid catabolic process	1.40E-03
47	GO:0010359: regulation of anion channel activity	1.40E-03
48	GO:0010288: response to lead ion	1.40E-03
49	GO:0090630: activation of GTPase activity	1.40E-03
50	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.40E-03
51	GO:0015783: GDP-fucose transport	1.40E-03
52	GO:0071367: cellular response to brassinosteroid stimulus	1.40E-03
53	GO:0006811: ion transport	1.66E-03
54	GO:1901332: negative regulation of lateral root development	2.02E-03
55	GO:0080024: indolebutyric acid metabolic process	2.02E-03
56	GO:0010371: regulation of gibberellin biosynthetic process	2.02E-03
57	GO:1901000: regulation of response to salt stress	2.02E-03
58	GO:0070301: cellular response to hydrogen peroxide	2.02E-03
59	GO:0015729: oxaloacetate transport	2.02E-03
60	GO:0072334: UDP-galactose transmembrane transport	2.02E-03
61	GO:0030100: regulation of endocytosis	2.02E-03
62	GO:0015867: ATP transport	2.71E-03
63	GO:0010222: stem vascular tissue pattern formation	2.71E-03
64	GO:0009687: abscisic acid metabolic process	2.71E-03
65	GO:0046345: abscisic acid catabolic process	2.71E-03
66	GO:0051365: cellular response to potassium ion starvation	2.71E-03
67	GO:0046355: mannan catabolic process	2.71E-03
68	GO:0071585: detoxification of cadmium ion	2.71E-03
69	GO:0006552: leucine catabolic process	2.71E-03
70	GO:0045490: pectin catabolic process	2.75E-03
71	GO:0001944: vasculature development	3.10E-03
72	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.10E-03
73	GO:0071215: cellular response to abscisic acid stimulus	3.10E-03
74	GO:0006656: phosphatidylcholine biosynthetic process	3.47E-03
75	GO:0006873: cellular ion homeostasis	3.47E-03
76	GO:0048497: maintenance of floral organ identity	3.47E-03
77	GO:0006461: protein complex assembly	3.47E-03
78	GO:0006665: sphingolipid metabolic process	3.47E-03
79	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	3.47E-03
80	GO:0071423: malate transmembrane transport	3.47E-03
81	GO:0009823: cytokinin catabolic process	3.47E-03
82	GO:0042538: hyperosmotic salinity response	3.65E-03
83	GO:0070417: cellular response to cold	3.65E-03
84	GO:0009651: response to salt stress	3.89E-03
85	GO:0048868: pollen tube development	4.26E-03
86	GO:1900425: negative regulation of defense response to bacterium	4.29E-03
87	GO:0006574: valine catabolic process	4.29E-03
88	GO:0006751: glutathione catabolic process	4.29E-03
89	GO:0015866: ADP transport	4.29E-03
90	GO:0009913: epidermal cell differentiation	4.29E-03
91	GO:0047484: regulation of response to osmotic stress	4.29E-03
92	GO:0010183: pollen tube guidance	4.91E-03
93	GO:0048367: shoot system development	5.16E-03
94	GO:0009082: branched-chain amino acid biosynthetic process	5.17E-03
95	GO:0010016: shoot system morphogenesis	5.17E-03
96	GO:0098655: cation transmembrane transport	5.17E-03
97	GO:0010555: response to mannitol	5.17E-03
98	GO:0080086: stamen filament development	5.17E-03
99	GO:0009955: adaxial/abaxial pattern specification	5.17E-03
100	GO:0071470: cellular response to osmotic stress	5.17E-03
101	GO:0000302: response to reactive oxygen species	5.26E-03
102	GO:0042545: cell wall modification	6.04E-03
103	GO:0050829: defense response to Gram-negative bacterium	6.11E-03
104	GO:0030307: positive regulation of cell growth	6.11E-03
105	GO:1902074: response to salt	6.11E-03
106	GO:0010103: stomatal complex morphogenesis	6.11E-03
107	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.11E-03
108	GO:0030497: fatty acid elongation	6.11E-03
109	GO:0008272: sulfate transport	6.11E-03
110	GO:0009828: plant-type cell wall loosening	6.38E-03
111	GO:0009690: cytokinin metabolic process	7.10E-03
112	GO:0009415: response to water	7.10E-03
113	GO:0009704: de-etiolation	7.10E-03
114	GO:0007155: cell adhesion	7.10E-03
115	GO:0008610: lipid biosynthetic process	7.10E-03
116	GO:0035265: organ growth	7.10E-03
117	GO:0001558: regulation of cell growth	8.15E-03
118	GO:0098656: anion transmembrane transport	9.25E-03
119	GO:0006098: pentose-phosphate shunt	9.25E-03
120	GO:0009611: response to wounding	1.03E-02
121	GO:0009638: phototropism	1.04E-02
122	GO:0048268: clathrin coat assembly	1.04E-02
123	GO:0042761: very long-chain fatty acid biosynthetic process	1.04E-02
124	GO:2000280: regulation of root development	1.04E-02
125	GO:0048767: root hair elongation	1.05E-02
126	GO:0006633: fatty acid biosynthetic process	1.12E-02
127	GO:0009641: shade avoidance	1.16E-02
128	GO:0006949: syncytium formation	1.16E-02
129	GO:0010150: leaf senescence	1.26E-02
130	GO:0052544: defense response by callose deposition in cell wall	1.29E-02
131	GO:0045037: protein import into chloroplast stroma	1.42E-02
132	GO:0005983: starch catabolic process	1.42E-02
133	GO:0016024: CDP-diacylglycerol biosynthetic process	1.42E-02
134	GO:0006839: mitochondrial transport	1.44E-02
135	GO:0009733: response to auxin	1.47E-02
136	GO:0055085: transmembrane transport	1.49E-02
137	GO:0050826: response to freezing	1.55E-02
138	GO:0009725: response to hormone	1.55E-02
139	GO:0010588: cotyledon vascular tissue pattern formation	1.55E-02
140	GO:0009744: response to sucrose	1.64E-02
141	GO:0008283: cell proliferation	1.64E-02
142	GO:0010540: basipetal auxin transport	1.69E-02
143	GO:0010143: cutin biosynthetic process	1.69E-02
144	GO:0010030: positive regulation of seed germination	1.83E-02
145	GO:0070588: calcium ion transmembrane transport	1.83E-02
146	GO:0009833: plant-type primary cell wall biogenesis	1.98E-02
147	GO:0009664: plant-type cell wall organization	2.06E-02
148	GO:0030150: protein import into mitochondrial matrix	2.13E-02
149	GO:0009736: cytokinin-activated signaling pathway	2.21E-02
150	GO:0009734: auxin-activated signaling pathway	2.24E-02
151	GO:0007017: microtubule-based process	2.29E-02
152	GO:0051302: regulation of cell division	2.29E-02
153	GO:0009269: response to desiccation	2.44E-02
154	GO:0031408: oxylipin biosynthetic process	2.44E-02
155	GO:0080092: regulation of pollen tube growth	2.61E-02
156	GO:0043086: negative regulation of catalytic activity	2.61E-02
157	GO:0048366: leaf development	2.69E-02
158	GO:0071369: cellular response to ethylene stimulus	2.77E-02
159	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.12E-02
160	GO:0009624: response to nematode	3.14E-02
161	GO:0018105: peptidyl-serine phosphorylation	3.24E-02
162	GO:0000226: microtubule cytoskeleton organization	3.29E-02
163	GO:0010268: brassinosteroid homeostasis	3.48E-02
164	GO:0009960: endosperm development	3.48E-02
165	GO:0010154: fruit development	3.48E-02
166	GO:0045892: negative regulation of transcription, DNA-templated	3.66E-02
167	GO:0048825: cotyledon development	3.85E-02
168	GO:0009749: response to glucose	3.85E-02
169	GO:0019252: starch biosynthetic process	3.85E-02
170	GO:0006635: fatty acid beta-oxidation	4.04E-02
171	GO:0016132: brassinosteroid biosynthetic process	4.04E-02
172	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.04E-02
173	GO:0009058: biosynthetic process	4.14E-02
174	GO:0009630: gravitropism	4.23E-02
175	GO:0010583: response to cyclopentenone	4.23E-02
176	GO:0009751: response to salicylic acid	4.57E-02
177	GO:0009790: embryo development	4.58E-02
178	GO:0006310: DNA recombination	4.63E-02
179	GO:0016125: sterol metabolic process	4.63E-02
180	GO:0010252: auxin homeostasis	4.63E-02
181	GO:0009639: response to red or far red light	4.63E-02
182	GO:0048364: root development	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0051060: pullulanase activity	0.00E+00
2	GO:0010303: limit dextrinase activity	0.00E+00
3	GO:0017048: Rho GTPase binding	0.00E+00
4	GO:0052747: sinapyl alcohol dehydrogenase activity	1.58E-05
5	GO:0070330: aromatase activity	2.45E-05
6	GO:0043565: sequence-specific DNA binding	4.33E-05
7	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.34E-05
8	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.04E-04
9	GO:0018685: alkane 1-monooxygenase activity	1.46E-04
10	GO:0009922: fatty acid elongase activity	1.46E-04
11	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.70E-04
12	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.70E-04
13	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.70E-04
14	GO:0015245: fatty acid transporter activity	3.97E-04
15	GO:0008809: carnitine racemase activity	3.97E-04
16	GO:0004105: choline-phosphate cytidylyltransferase activity	3.97E-04
17	GO:0005534: galactose binding	3.97E-04
18	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	3.97E-04
19	GO:0015117: thiosulfate transmembrane transporter activity	8.60E-04
20	GO:1901677: phosphate transmembrane transporter activity	8.60E-04
21	GO:0016629: 12-oxophytodienoate reductase activity	8.60E-04
22	GO:0017022: myosin binding	8.60E-04
23	GO:0017040: ceramidase activity	8.60E-04
24	GO:0003839: gamma-glutamylcyclotransferase activity	8.60E-04
25	GO:0017108: 5'-flap endonuclease activity	1.40E-03
26	GO:0005457: GDP-fucose transmembrane transporter activity	1.40E-03
27	GO:0005310: dicarboxylic acid transmembrane transporter activity	1.40E-03
28	GO:0015141: succinate transmembrane transporter activity	1.40E-03
29	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.40E-03
30	GO:0003883: CTP synthase activity	2.02E-03
31	GO:0005460: UDP-glucose transmembrane transporter activity	2.02E-03
32	GO:0052656: L-isoleucine transaminase activity	2.02E-03
33	GO:0004165: dodecenoyl-CoA delta-isomerase activity	2.02E-03
34	GO:0052654: L-leucine transaminase activity	2.02E-03
35	GO:0052655: L-valine transaminase activity	2.02E-03
36	GO:0015131: oxaloacetate transmembrane transporter activity	2.02E-03
37	GO:0046910: pectinesterase inhibitor activity	2.47E-03
38	GO:0016985: mannan endo-1,4-beta-mannosidase activity	2.71E-03
39	GO:0004084: branched-chain-amino-acid transaminase activity	2.71E-03
40	GO:0080122: AMP transmembrane transporter activity	3.47E-03
41	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.47E-03
42	GO:0010294: abscisic acid glucosyltransferase activity	3.47E-03
43	GO:0005459: UDP-galactose transmembrane transporter activity	3.47E-03
44	GO:0019139: cytokinin dehydrogenase activity	3.47E-03
45	GO:0044212: transcription regulatory region DNA binding	4.00E-03
46	GO:0004556: alpha-amylase activity	4.29E-03
47	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	4.29E-03
48	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	4.29E-03
49	GO:0045330: aspartyl esterase activity	4.56E-03
50	GO:0005347: ATP transmembrane transporter activity	5.17E-03
51	GO:0015217: ADP transmembrane transporter activity	5.17E-03
52	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.59E-03
53	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.59E-03
54	GO:0030599: pectinesterase activity	5.81E-03
55	GO:0016621: cinnamoyl-CoA reductase activity	6.11E-03
56	GO:0015140: malate transmembrane transporter activity	6.11E-03
57	GO:0016746: transferase activity, transferring acyl groups	6.51E-03
58	GO:0015288: porin activity	7.10E-03
59	GO:0016209: antioxidant activity	7.10E-03
60	GO:0008308: voltage-gated anion channel activity	8.15E-03
61	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.46E-03
62	GO:0003677: DNA binding	9.61E-03
63	GO:0009672: auxin:proton symporter activity	1.04E-02
64	GO:0005096: GTPase activator activity	1.05E-02
65	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.15E-02
66	GO:0005545: 1-phosphatidylinositol binding	1.16E-02
67	GO:0015020: glucuronosyltransferase activity	1.16E-02
68	GO:0015116: sulfate transmembrane transporter activity	1.42E-02
69	GO:0005262: calcium channel activity	1.55E-02
70	GO:0015114: phosphate ion transmembrane transporter activity	1.55E-02
71	GO:0010329: auxin efflux transmembrane transporter activity	1.55E-02
72	GO:0015266: protein channel activity	1.55E-02
73	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.69E-02
74	GO:0008083: growth factor activity	1.69E-02
75	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.71E-02
76	GO:0017025: TBP-class protein binding	1.83E-02
77	GO:0008146: sulfotransferase activity	1.83E-02
78	GO:0043130: ubiquitin binding	2.13E-02
79	GO:0035251: UDP-glucosyltransferase activity	2.44E-02
80	GO:0030570: pectate lyase activity	2.77E-02
81	GO:0016874: ligase activity	2.96E-02
82	GO:0003713: transcription coactivator activity	3.48E-02
83	GO:0030276: clathrin binding	3.48E-02
84	GO:0010181: FMN binding	3.66E-02
85	GO:0004872: receptor activity	3.85E-02
86	GO:0004518: nuclease activity	4.23E-02
87	GO:0016791: phosphatase activity	4.63E-02
88	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.69E-02
89	GO:0005200: structural constituent of cytoskeleton	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	7.04E-06
4	GO:0070382: exocytic vesicle	3.97E-04
5	GO:0030133: transport vesicle	8.60E-04
6	GO:0046658: anchored component of plasma membrane	9.50E-04
7	GO:0009897: external side of plasma membrane	1.40E-03
8	GO:0045177: apical part of cell	2.02E-03
9	GO:0031225: anchored component of membrane	2.26E-03
10	GO:0005618: cell wall	2.53E-03
11	GO:0009527: plastid outer membrane	2.71E-03
12	GO:0005622: intracellular	3.01E-03
13	GO:0005798: Golgi-associated vesicle	4.29E-03
14	GO:0000793: condensed chromosome	4.29E-03
15	GO:0000794: condensed nuclear chromosome	6.11E-03
16	GO:0009505: plant-type cell wall	6.53E-03
17	GO:0031305: integral component of mitochondrial inner membrane	7.10E-03
18	GO:0046930: pore complex	8.15E-03
19	GO:0045298: tubulin complex	9.25E-03
20	GO:0016604: nuclear body	1.04E-02
21	GO:0005938: cell cortex	1.55E-02
22	GO:0031012: extracellular matrix	1.55E-02
23	GO:0016021: integral component of membrane	1.71E-02
24	GO:0005875: microtubule associated complex	1.98E-02
25	GO:0005769: early endosome	1.98E-02
26	GO:0016020: membrane	2.19E-02
27	GO:0005905: clathrin-coated pit	2.44E-02
28	GO:0005886: plasma membrane	2.72E-02
29	GO:0005768: endosome	2.76E-02
30	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.94E-02
31	GO:0030136: clathrin-coated vesicle	3.12E-02
32	GO:0005743: mitochondrial inner membrane	4.25E-02
33	GO:0071944: cell periphery	4.43E-02