co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010202: response to low fluence red light stimulus	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0017012: protein-phytochromobilin linkage	0.00E+00
4	GO:0042908: xenobiotic transport	0.00E+00
5	GO:0009649: entrainment of circadian clock	6.83E-07
6	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	2.19E-05
7	GO:0043100: pyrimidine nucleobase salvage	5.64E-05
8	GO:0030010: establishment of cell polarity	5.64E-05
9	GO:0010617: circadian regulation of calcium ion oscillation	5.64E-05
10	GO:0009584: detection of visible light	1.49E-04
11	GO:0010148: transpiration	1.49E-04
12	GO:0009963: positive regulation of flavonoid biosynthetic process	1.49E-04
13	GO:0015700: arsenite transport	1.49E-04
14	GO:0009647: skotomorphogenesis	1.49E-04
15	GO:0055069: zinc ion homeostasis	1.49E-04
16	GO:0009687: abscisic acid metabolic process	2.04E-04
17	GO:0006221: pyrimidine nucleotide biosynthetic process	2.04E-04
18	GO:0044205: 'de novo' UMP biosynthetic process	2.04E-04
19	GO:0006878: cellular copper ion homeostasis	2.04E-04
20	GO:0006646: phosphatidylethanolamine biosynthetic process	2.04E-04
21	GO:0046283: anthocyanin-containing compound metabolic process	2.62E-04
22	GO:0003006: developmental process involved in reproduction	3.24E-04
23	GO:0009117: nucleotide metabolic process	3.24E-04
24	GO:0009640: photomorphogenesis	3.49E-04
25	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	3.89E-04
26	GO:0005975: carbohydrate metabolic process	4.31E-04
27	GO:0010374: stomatal complex development	4.56E-04
28	GO:0010161: red light signaling pathway	4.56E-04
29	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	4.56E-04
30	GO:0009585: red, far-red light phototransduction	4.67E-04
31	GO:0009642: response to light intensity	5.25E-04
32	GO:0009880: embryonic pattern specification	5.98E-04
33	GO:0046685: response to arsenic-containing substance	6.71E-04
34	GO:0035556: intracellular signal transduction	7.21E-04
35	GO:0009638: phototropism	7.48E-04
36	GO:0042761: very long-chain fatty acid biosynthetic process	7.48E-04
37	GO:0009641: shade avoidance	8.27E-04
38	GO:0006325: chromatin organization	8.27E-04
39	GO:0055085: transmembrane transport	9.04E-04
40	GO:0006816: calcium ion transport	9.07E-04
41	GO:0052544: defense response by callose deposition in cell wall	9.07E-04
42	GO:0050826: response to freezing	1.07E-03
43	GO:0006094: gluconeogenesis	1.07E-03
44	GO:0006108: malate metabolic process	1.07E-03
45	GO:0006006: glucose metabolic process	1.07E-03
46	GO:2000028: regulation of photoperiodism, flowering	1.07E-03
47	GO:0009266: response to temperature stimulus	1.16E-03
48	GO:0019853: L-ascorbic acid biosynthetic process	1.25E-03
49	GO:0010039: response to iron ion	1.25E-03
50	GO:0042742: defense response to bacterium	1.61E-03
51	GO:0061077: chaperone-mediated protein folding	1.63E-03
52	GO:0031348: negative regulation of defense response	1.73E-03
53	GO:0006012: galactose metabolic process	1.83E-03
54	GO:0009693: ethylene biosynthetic process	1.83E-03
55	GO:0042391: regulation of membrane potential	2.15E-03
56	GO:0006520: cellular amino acid metabolic process	2.26E-03
57	GO:0055072: iron ion homeostasis	2.49E-03
58	GO:0008654: phospholipid biosynthetic process	2.49E-03
59	GO:0045892: negative regulation of transcription, DNA-templated	2.50E-03
60	GO:0009630: gravitropism	2.73E-03
61	GO:1901657: glycosyl compound metabolic process	2.85E-03
62	GO:0010029: regulation of seed germination	3.47E-03
63	GO:0009816: defense response to bacterium, incompatible interaction	3.47E-03
64	GO:0048573: photoperiodism, flowering	3.73E-03
65	GO:0009817: defense response to fungus, incompatible interaction	4.00E-03
66	GO:0018298: protein-chromophore linkage	4.00E-03
67	GO:0006811: ion transport	4.28E-03
68	GO:0010218: response to far red light	4.28E-03
69	GO:0048527: lateral root development	4.42E-03
70	GO:0010119: regulation of stomatal movement	4.42E-03
71	GO:0009867: jasmonic acid mediated signaling pathway	4.70E-03
72	GO:0006099: tricarboxylic acid cycle	4.85E-03
73	GO:0009926: auxin polar transport	5.60E-03
74	GO:0009636: response to toxic substance	6.07E-03
75	GO:0006855: drug transmembrane transport	6.23E-03
76	GO:0031347: regulation of defense response	6.39E-03
77	GO:0009736: cytokinin-activated signaling pathway	6.88E-03
78	GO:0010224: response to UV-B	7.05E-03
79	GO:0006857: oligopeptide transport	7.21E-03
80	GO:0006096: glycolytic process	7.73E-03
81	GO:0048316: seed development	7.90E-03
82	GO:0009620: response to fungus	8.25E-03
83	GO:0009058: biosynthetic process	1.07E-02
84	GO:0009790: embryo development	1.15E-02
85	GO:0010468: regulation of gene expression	1.46E-02
86	GO:0009617: response to bacterium	1.46E-02
87	GO:0009409: response to cold	1.47E-02
88	GO:0009826: unidimensional cell growth	1.71E-02
89	GO:0009658: chloroplast organization	1.76E-02
90	GO:0006468: protein phosphorylation	2.14E-02
91	GO:0044550: secondary metabolite biosynthetic process	2.18E-02
92	GO:0015979: photosynthesis	2.25E-02
93	GO:0006281: DNA repair	2.71E-02
94	GO:0006629: lipid metabolic process	2.71E-02
95	GO:0009408: response to heat	2.71E-02
96	GO:0048364: root development	2.79E-02
97	GO:0009753: response to jasmonic acid	2.85E-02
98	GO:0008152: metabolic process	2.90E-02
99	GO:0009734: auxin-activated signaling pathway	3.46E-02
100	GO:0009735: response to cytokinin	3.82E-02

Rank	GO Term	Adjusted P value
1	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
2	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
3	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
4	GO:0031517: red light photoreceptor activity	0.00E+00
5	GO:0004151: dihydroorotase activity	0.00E+00
6	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
7	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
8	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
9	GO:0015633: zinc-transporting ATPase activity	0.00E+00
10	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
11	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	2.19E-05
12	GO:0080048: GDP-D-glucose phosphorylase activity	2.19E-05
13	GO:0046480: galactolipid galactosyltransferase activity	2.19E-05
14	GO:0004347: glucose-6-phosphate isomerase activity	2.19E-05
15	GO:0010013: N-1-naphthylphthalamic acid binding	2.19E-05
16	GO:0080079: cellobiose glucosidase activity	2.19E-05
17	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	2.19E-05
18	GO:0004008: copper-exporting ATPase activity	2.19E-05
19	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.19E-05
20	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	2.19E-05
21	GO:0080047: GDP-L-galactose phosphorylase activity	2.19E-05
22	GO:1990841: promoter-specific chromatin binding	2.19E-05
23	GO:0070006: metalloaminopeptidase activity	2.19E-05
24	GO:0071992: phytochelatin transmembrane transporter activity	2.19E-05
25	GO:0004307: ethanolaminephosphotransferase activity	2.19E-05
26	GO:0031516: far-red light photoreceptor activity	2.19E-05
27	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	2.19E-05
28	GO:0009883: red or far-red light photoreceptor activity	5.64E-05
29	GO:0015434: cadmium-transporting ATPase activity	5.64E-05
30	GO:0008551: cadmium-exporting ATPase activity	5.64E-05
31	GO:0030572: phosphatidyltransferase activity	5.64E-05
32	GO:0004142: diacylglycerol cholinephosphotransferase activity	5.64E-05
33	GO:0051980: iron-nicotianamine transmembrane transporter activity	5.64E-05
34	GO:0016463: zinc-exporting ATPase activity	5.64E-05
35	GO:0052692: raffinose alpha-galactosidase activity	9.94E-05
36	GO:0032947: protein complex scaffold	9.94E-05
37	GO:0004557: alpha-galactosidase activity	9.94E-05
38	GO:0008020: G-protein coupled photoreceptor activity	9.94E-05
39	GO:0035529: NADH pyrophosphatase activity	1.49E-04
40	GO:0042277: peptide binding	2.04E-04
41	GO:0080046: quercetin 4'-O-glucosyltransferase activity	3.24E-04
42	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	3.24E-04
43	GO:0016615: malate dehydrogenase activity	3.24E-04
44	GO:0030060: L-malate dehydrogenase activity	3.89E-04
45	GO:0005261: cation channel activity	3.89E-04
46	GO:0005085: guanyl-nucleotide exchange factor activity	4.56E-04
47	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	5.25E-04
48	GO:0004034: aldose 1-epimerase activity	5.25E-04
49	GO:0004673: protein histidine kinase activity	8.27E-04
50	GO:0008559: xenobiotic-transporting ATPase activity	9.07E-04
51	GO:0004177: aminopeptidase activity	9.07E-04
52	GO:0008378: galactosyltransferase activity	9.89E-04
53	GO:0015198: oligopeptide transporter activity	9.89E-04
54	GO:0000155: phosphorelay sensor kinase activity	1.07E-03
55	GO:0005388: calcium-transporting ATPase activity	1.07E-03
56	GO:0030552: cAMP binding	1.25E-03
57	GO:0030553: cGMP binding	1.25E-03
58	GO:0042802: identical protein binding	1.38E-03
59	GO:0005528: FK506 binding	1.43E-03
60	GO:0005216: ion channel activity	1.53E-03
61	GO:0005249: voltage-gated potassium channel activity	2.15E-03
62	GO:0030551: cyclic nucleotide binding	2.15E-03
63	GO:0016853: isomerase activity	2.38E-03
64	GO:0004871: signal transducer activity	2.58E-03
65	GO:0004672: protein kinase activity	2.61E-03
66	GO:0008483: transaminase activity	3.09E-03
67	GO:0016597: amino acid binding	3.22E-03
68	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.28E-03
69	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.00E-03
70	GO:0008422: beta-glucosidase activity	5.00E-03
71	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.23E-03
72	GO:0005516: calmodulin binding	8.02E-03
73	GO:0022857: transmembrane transporter activity	8.43E-03
74	GO:0030170: pyridoxal phosphate binding	1.11E-02
75	GO:0004674: protein serine/threonine kinase activity	1.21E-02
76	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.53E-02
77	GO:0016787: hydrolase activity	2.32E-02
78	GO:0042803: protein homodimerization activity	2.41E-02
79	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.46E-02
80	GO:0016887: ATPase activity	3.70E-02
81	GO:0000166: nucleotide binding	4.07E-02
82	GO:0005515: protein binding	4.36E-02
83	GO:0003676: nucleic acid binding	4.45E-02
84	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0016604: nuclear body	1.05E-05
2	GO:0000152: nuclear ubiquitin ligase complex	2.19E-05
3	GO:0009526: plastid envelope	2.04E-04
4	GO:0031463: Cul3-RING ubiquitin ligase complex	3.24E-04
5	GO:0031359: integral component of chloroplast outer membrane	4.56E-04
6	GO:0031090: organelle membrane	6.71E-04
7	GO:0048471: perinuclear region of cytoplasm	9.07E-04
8	GO:0005759: mitochondrial matrix	1.01E-03
9	GO:0005829: cytosol	1.33E-03
10	GO:0009707: chloroplast outer membrane	4.00E-03
11	GO:0000325: plant-type vacuole	4.42E-03
12	GO:0005747: mitochondrial respiratory chain complex I	7.90E-03
13	GO:0016607: nuclear speck	7.90E-03
14	GO:0009706: chloroplast inner membrane	8.79E-03
15	GO:0016020: membrane	1.08E-02
16	GO:0005773: vacuole	1.33E-02
17	GO:0009536: plastid	1.33E-02
18	GO:0016021: integral component of membrane	1.71E-02
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.88E-02
20	GO:0005783: endoplasmic reticulum	1.88E-02
21	GO:0031969: chloroplast membrane	2.05E-02
22	GO:0005886: plasma membrane	2.16E-02
23	GO:0043231: intracellular membrane-bounded organelle	2.90E-02
24	GO:0005887: integral component of plasma membrane	3.37E-02
25	GO:0048046: apoplast	3.94E-02