Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G15940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
2GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
3GO:0009264: deoxyribonucleotide catabolic process0.00E+00
4GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
5GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
6GO:0035725: sodium ion transmembrane transport0.00E+00
7GO:0010043: response to zinc ion3.37E-05
8GO:1901349: glucosinolate transport4.88E-05
9GO:0033306: phytol metabolic process4.88E-05
10GO:0090449: phloem glucosinolate loading4.88E-05
11GO:0015812: gamma-aminobutyric acid transport4.88E-05
12GO:0006631: fatty acid metabolic process5.11E-05
13GO:2000379: positive regulation of reactive oxygen species metabolic process1.20E-04
14GO:0015786: UDP-glucose transport1.20E-04
15GO:0043132: NAD transport1.20E-04
16GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.20E-04
17GO:0015692: lead ion transport2.06E-04
18GO:0044375: regulation of peroxisome size2.06E-04
19GO:0010351: lithium ion transport2.06E-04
20GO:0015783: GDP-fucose transport2.06E-04
21GO:0072334: UDP-galactose transmembrane transport3.01E-04
22GO:0015858: nucleoside transport3.01E-04
23GO:0046836: glycolipid transport3.01E-04
24GO:0010363: regulation of plant-type hypersensitive response4.04E-04
25GO:1902183: regulation of shoot apical meristem development5.13E-04
26GO:0009697: salicylic acid biosynthetic process5.13E-04
27GO:0098719: sodium ion import across plasma membrane5.13E-04
28GO:0006511: ubiquitin-dependent protein catabolic process6.05E-04
29GO:0006828: manganese ion transport6.29E-04
30GO:0015691: cadmium ion transport6.29E-04
31GO:0009942: longitudinal axis specification7.50E-04
32GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c8.75E-04
33GO:0016559: peroxisome fission1.01E-03
34GO:0006644: phospholipid metabolic process1.01E-03
35GO:0006875: cellular metal ion homeostasis1.01E-03
36GO:0055075: potassium ion homeostasis1.01E-03
37GO:0009636: response to toxic substance1.04E-03
38GO:0015996: chlorophyll catabolic process1.14E-03
39GO:0051603: proteolysis involved in cellular protein catabolic process1.27E-03
40GO:0015780: nucleotide-sugar transport1.28E-03
41GO:0046685: response to arsenic-containing substance1.28E-03
42GO:0019432: triglyceride biosynthetic process1.28E-03
43GO:0048507: meristem development1.28E-03
44GO:0055114: oxidation-reduction process1.28E-03
45GO:0090333: regulation of stomatal closure1.28E-03
46GO:0051453: regulation of intracellular pH1.43E-03
47GO:0009651: response to salt stress1.64E-03
48GO:0002213: defense response to insect1.91E-03
49GO:0009725: response to hormone2.08E-03
50GO:0006807: nitrogen compound metabolic process2.08E-03
51GO:0007031: peroxisome organization2.44E-03
52GO:0019762: glucosinolate catabolic process2.62E-03
53GO:0016226: iron-sulfur cluster assembly3.41E-03
54GO:0010584: pollen exine formation3.82E-03
55GO:0010051: xylem and phloem pattern formation4.26E-03
56GO:0010154: fruit development4.48E-03
57GO:0010305: leaf vascular tissue pattern formation4.48E-03
58GO:0006662: glycerol ether metabolic process4.48E-03
59GO:0006814: sodium ion transport4.71E-03
60GO:0008654: phospholipid biosynthetic process4.94E-03
61GO:0055072: iron ion homeostasis4.94E-03
62GO:0071554: cell wall organization or biogenesis5.18E-03
63GO:0016132: brassinosteroid biosynthetic process5.18E-03
64GO:0071805: potassium ion transmembrane transport6.16E-03
65GO:0016126: sterol biosynthetic process6.67E-03
66GO:0009816: defense response to bacterium, incompatible interaction6.94E-03
67GO:0008219: cell death8.03E-03
68GO:0048767: root hair elongation8.31E-03
69GO:0009910: negative regulation of flower development8.88E-03
70GO:0006810: transport9.58E-03
71GO:0034599: cellular response to oxidative stress9.77E-03
72GO:0006839: mitochondrial transport1.04E-02
73GO:0030001: metal ion transport1.04E-02
74GO:0008283: cell proliferation1.13E-02
75GO:0009926: auxin polar transport1.13E-02
76GO:0000209: protein polyubiquitination1.16E-02
77GO:0008643: carbohydrate transport1.20E-02
78GO:0009965: leaf morphogenesis1.23E-02
79GO:0009908: flower development1.34E-02
80GO:0006857: oligopeptide transport1.47E-02
81GO:0009058: biosynthetic process2.18E-02
82GO:0009790: embryo development2.35E-02
83GO:0007623: circadian rhythm2.65E-02
84GO:0010150: leaf senescence2.65E-02
85GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.87E-02
86GO:0009414: response to water deprivation2.93E-02
87GO:0009617: response to bacterium3.00E-02
88GO:0009826: unidimensional cell growth3.52E-02
89GO:0009409: response to cold4.05E-02
90GO:0048366: leaf development4.06E-02
91GO:0080167: response to karrikin4.21E-02
92GO:0045454: cell redox homeostasis4.78E-02
RankGO TermAdjusted P value
1GO:0048244: phytanoyl-CoA dioxygenase activity0.00E+00
2GO:0070401: NADP+ binding0.00E+00
3GO:0032441: pheophorbide a oxygenase activity0.00E+00
4GO:0044610: FMN transmembrane transporter activity0.00E+00
5GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
6GO:0016229: steroid dehydrogenase activity0.00E+00
7GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
8GO:0004298: threonine-type endopeptidase activity2.67E-06
9GO:0004033: aldo-keto reductase (NADP) activity1.84E-05
10GO:0010013: N-1-naphthylphthalamic acid binding4.88E-05
11GO:0050200: plasmalogen synthase activity4.88E-05
12GO:0015185: gamma-aminobutyric acid transmembrane transporter activity4.88E-05
13GO:0015230: FAD transmembrane transporter activity4.88E-05
14GO:0090448: glucosinolate:proton symporter activity4.88E-05
15GO:0000248: C-5 sterol desaturase activity4.88E-05
16GO:0004047: aminomethyltransferase activity1.20E-04
17GO:0051724: NAD transporter activity1.20E-04
18GO:0015228: coenzyme A transmembrane transporter activity1.20E-04
19GO:0010277: chlorophyllide a oxygenase [overall] activity2.06E-04
20GO:0008253: 5'-nucleotidase activity2.06E-04
21GO:0005457: GDP-fucose transmembrane transporter activity2.06E-04
22GO:0001872: (1->3)-beta-D-glucan binding3.01E-04
23GO:0017089: glycolipid transporter activity3.01E-04
24GO:0008106: alcohol dehydrogenase (NADP+) activity3.01E-04
25GO:0005460: UDP-glucose transmembrane transporter activity3.01E-04
26GO:0051861: glycolipid binding4.04E-04
27GO:0003995: acyl-CoA dehydrogenase activity4.04E-04
28GO:0005459: UDP-galactose transmembrane transporter activity5.13E-04
29GO:0080122: AMP transmembrane transporter activity5.13E-04
30GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity6.29E-04
31GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity6.29E-04
32GO:0015081: sodium ion transmembrane transporter activity6.29E-04
33GO:0008233: peptidase activity7.14E-04
34GO:0015217: ADP transmembrane transporter activity7.50E-04
35GO:0004144: diacylglycerol O-acyltransferase activity7.50E-04
36GO:0005347: ATP transmembrane transporter activity7.50E-04
37GO:0005338: nucleotide-sugar transmembrane transporter activity8.75E-04
38GO:0015103: inorganic anion transmembrane transporter activity8.75E-04
39GO:0003824: catalytic activity1.26E-03
40GO:0005384: manganese ion transmembrane transporter activity1.43E-03
41GO:0015386: potassium:proton antiporter activity1.75E-03
42GO:0004177: aminopeptidase activity1.75E-03
43GO:0031418: L-ascorbic acid binding2.81E-03
44GO:0051536: iron-sulfur cluster binding2.81E-03
45GO:0042802: identical protein binding3.75E-03
46GO:0008514: organic anion transmembrane transporter activity3.82E-03
47GO:0047134: protein-disulfide reductase activity4.04E-03
48GO:0046873: metal ion transmembrane transporter activity4.48E-03
49GO:0004791: thioredoxin-disulfide reductase activity4.71E-03
50GO:0015385: sodium:proton antiporter activity5.66E-03
51GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.66E-03
52GO:0016413: O-acetyltransferase activity6.42E-03
53GO:0102483: scopolin beta-glucosidase activity7.48E-03
54GO:0004806: triglyceride lipase activity7.48E-03
55GO:0030247: polysaccharide binding7.48E-03
56GO:0008422: beta-glucosidase activity1.01E-02
57GO:0051537: 2 iron, 2 sulfur cluster binding1.20E-02
58GO:0005198: structural molecule activity1.23E-02
59GO:0016298: lipase activity1.43E-02
60GO:0031625: ubiquitin protein ligase binding1.50E-02
61GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.61E-02
62GO:0022857: transmembrane transporter activity1.72E-02
63GO:0016740: transferase activity1.81E-02
64GO:0015035: protein disulfide oxidoreductase activity1.83E-02
65GO:0016746: transferase activity, transferring acyl groups1.83E-02
66GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.95E-02
67GO:0005507: copper ion binding2.11E-02
68GO:0030170: pyridoxal phosphate binding2.27E-02
69GO:0015297: antiporter activity2.56E-02
70GO:0005351: sugar:proton symporter activity2.60E-02
71GO:0005215: transporter activity3.32E-02
72GO:0046982: protein heterodimerization activity3.56E-02
73GO:0016491: oxidoreductase activity3.94E-02
74GO:0050660: flavin adenine dinucleotide binding4.01E-02
75GO:0061630: ubiquitin protein ligase activity4.36E-02
RankGO TermAdjusted P value
1GO:0005839: proteasome core complex2.67E-06
2GO:0005777: peroxisome4.19E-06
3GO:0005779: integral component of peroxisomal membrane2.37E-05
4GO:0000502: proteasome complex9.08E-05
5GO:0046861: glyoxysomal membrane2.06E-04
6GO:0005774: vacuolar membrane4.00E-04
7GO:0005778: peroxisomal membrane4.00E-04
8GO:0009514: glyoxysome1.14E-03
9GO:0019773: proteasome core complex, alpha-subunit complex1.14E-03
10GO:0010287: plastoglobule2.04E-03
11GO:0005758: mitochondrial intermembrane space2.81E-03
12GO:0070469: respiratory chain3.01E-03
13GO:0000325: plant-type vacuole8.88E-03
14GO:0000786: nucleosome9.17E-03
15GO:0005789: endoplasmic reticulum membrane1.01E-02
16GO:0031977: thylakoid lumen1.07E-02
17GO:0005829: cytosol1.71E-02
18GO:0009706: chloroplast inner membrane1.79E-02
19GO:0009534: chloroplast thylakoid1.79E-02
20GO:0005759: mitochondrial matrix2.47E-02
21GO:0046658: anchored component of plasma membrane3.23E-02
22GO:0009536: plastid3.68E-02
23GO:0000139: Golgi membrane4.05E-02
24GO:0005737: cytoplasm4.20E-02
25GO:0005773: vacuole4.79E-02
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Gene type



Gene DE type