GO Enrichment Analysis of Co-expressed Genes with
AT4G15920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0080005: photosystem stoichiometry adjustment | 1.62E-07 |
| 4 | GO:0010190: cytochrome b6f complex assembly | 7.64E-06 |
| 5 | GO:0009657: plastid organization | 2.60E-05 |
| 6 | GO:0031426: polycistronic mRNA processing | 5.18E-05 |
| 7 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 5.18E-05 |
| 8 | GO:0042371: vitamin K biosynthetic process | 5.18E-05 |
| 9 | GO:0071461: cellular response to redox state | 5.18E-05 |
| 10 | GO:0010362: negative regulation of anion channel activity by blue light | 5.18E-05 |
| 11 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 5.18E-05 |
| 12 | GO:0009658: chloroplast organization | 5.66E-05 |
| 13 | GO:0000256: allantoin catabolic process | 1.27E-04 |
| 14 | GO:0016122: xanthophyll metabolic process | 1.27E-04 |
| 15 | GO:0009915: phloem sucrose loading | 1.27E-04 |
| 16 | GO:0010136: ureide catabolic process | 2.17E-04 |
| 17 | GO:0006013: mannose metabolic process | 2.17E-04 |
| 18 | GO:0009791: post-embryonic development | 3.13E-04 |
| 19 | GO:0050482: arachidonic acid secretion | 3.17E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 3.17E-04 |
| 21 | GO:0010239: chloroplast mRNA processing | 3.17E-04 |
| 22 | GO:0006809: nitric oxide biosynthetic process | 3.17E-04 |
| 23 | GO:0006145: purine nucleobase catabolic process | 3.17E-04 |
| 24 | GO:0006021: inositol biosynthetic process | 4.24E-04 |
| 25 | GO:0009902: chloroplast relocation | 4.24E-04 |
| 26 | GO:0010021: amylopectin biosynthetic process | 4.24E-04 |
| 27 | GO:0009765: photosynthesis, light harvesting | 4.24E-04 |
| 28 | GO:0015994: chlorophyll metabolic process | 4.24E-04 |
| 29 | GO:0016123: xanthophyll biosynthetic process | 5.39E-04 |
| 30 | GO:0016120: carotene biosynthetic process | 5.39E-04 |
| 31 | GO:0015995: chlorophyll biosynthetic process | 5.66E-04 |
| 32 | GO:0046855: inositol phosphate dephosphorylation | 6.60E-04 |
| 33 | GO:0010189: vitamin E biosynthetic process | 7.87E-04 |
| 34 | GO:1900056: negative regulation of leaf senescence | 9.18E-04 |
| 35 | GO:0006644: phospholipid metabolic process | 1.06E-03 |
| 36 | GO:0048564: photosystem I assembly | 1.06E-03 |
| 37 | GO:0019430: removal of superoxide radicals | 1.20E-03 |
| 38 | GO:0032544: plastid translation | 1.20E-03 |
| 39 | GO:0071482: cellular response to light stimulus | 1.20E-03 |
| 40 | GO:0006783: heme biosynthetic process | 1.35E-03 |
| 41 | GO:0048507: meristem development | 1.35E-03 |
| 42 | GO:0009638: phototropism | 1.50E-03 |
| 43 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.50E-03 |
| 44 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.50E-03 |
| 45 | GO:0055114: oxidation-reduction process | 1.57E-03 |
| 46 | GO:0045036: protein targeting to chloroplast | 1.67E-03 |
| 47 | GO:0006259: DNA metabolic process | 1.67E-03 |
| 48 | GO:0051555: flavonol biosynthetic process | 1.67E-03 |
| 49 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.67E-03 |
| 50 | GO:0006265: DNA topological change | 1.84E-03 |
| 51 | GO:0006352: DNA-templated transcription, initiation | 1.84E-03 |
| 52 | GO:0006790: sulfur compound metabolic process | 2.01E-03 |
| 53 | GO:0005986: sucrose biosynthetic process | 2.19E-03 |
| 54 | GO:0006829: zinc II ion transport | 2.19E-03 |
| 55 | GO:0009266: response to temperature stimulus | 2.38E-03 |
| 56 | GO:0006541: glutamine metabolic process | 2.38E-03 |
| 57 | GO:0019853: L-ascorbic acid biosynthetic process | 2.56E-03 |
| 58 | GO:0046854: phosphatidylinositol phosphorylation | 2.56E-03 |
| 59 | GO:0007017: microtubule-based process | 3.16E-03 |
| 60 | GO:0006366: transcription from RNA polymerase II promoter | 3.37E-03 |
| 61 | GO:0016226: iron-sulfur cluster assembly | 3.59E-03 |
| 62 | GO:0035428: hexose transmembrane transport | 3.59E-03 |
| 63 | GO:0010468: regulation of gene expression | 3.79E-03 |
| 64 | GO:0016117: carotenoid biosynthetic process | 4.26E-03 |
| 65 | GO:0010118: stomatal movement | 4.49E-03 |
| 66 | GO:0042335: cuticle development | 4.49E-03 |
| 67 | GO:0006662: glycerol ether metabolic process | 4.72E-03 |
| 68 | GO:0046323: glucose import | 4.72E-03 |
| 69 | GO:0007059: chromosome segregation | 4.96E-03 |
| 70 | GO:0019252: starch biosynthetic process | 5.21E-03 |
| 71 | GO:0010193: response to ozone | 5.46E-03 |
| 72 | GO:0007264: small GTPase mediated signal transduction | 5.71E-03 |
| 73 | GO:0080167: response to karrikin | 6.08E-03 |
| 74 | GO:0071555: cell wall organization | 6.48E-03 |
| 75 | GO:0046777: protein autophosphorylation | 6.50E-03 |
| 76 | GO:0010027: thylakoid membrane organization | 7.04E-03 |
| 77 | GO:0045454: cell redox homeostasis | 7.27E-03 |
| 78 | GO:0009816: defense response to bacterium, incompatible interaction | 7.31E-03 |
| 79 | GO:0042128: nitrate assimilation | 7.59E-03 |
| 80 | GO:0010411: xyloglucan metabolic process | 7.88E-03 |
| 81 | GO:0018298: protein-chromophore linkage | 8.46E-03 |
| 82 | GO:0000160: phosphorelay signal transduction system | 8.76E-03 |
| 83 | GO:0010043: response to zinc ion | 9.36E-03 |
| 84 | GO:0009910: negative regulation of flower development | 9.36E-03 |
| 85 | GO:0009409: response to cold | 9.53E-03 |
| 86 | GO:0009637: response to blue light | 9.99E-03 |
| 87 | GO:0034599: cellular response to oxidative stress | 1.03E-02 |
| 88 | GO:0006631: fatty acid metabolic process | 1.13E-02 |
| 89 | GO:0046686: response to cadmium ion | 1.14E-02 |
| 90 | GO:0010114: response to red light | 1.19E-02 |
| 91 | GO:0042546: cell wall biogenesis | 1.23E-02 |
| 92 | GO:0009644: response to high light intensity | 1.26E-02 |
| 93 | GO:0031347: regulation of defense response | 1.37E-02 |
| 94 | GO:0009735: response to cytokinin | 1.46E-02 |
| 95 | GO:0009809: lignin biosynthetic process | 1.47E-02 |
| 96 | GO:0006364: rRNA processing | 1.47E-02 |
| 97 | GO:0006857: oligopeptide transport | 1.55E-02 |
| 98 | GO:0006417: regulation of translation | 1.58E-02 |
| 99 | GO:0009416: response to light stimulus | 1.60E-02 |
| 100 | GO:0006096: glycolytic process | 1.66E-02 |
| 101 | GO:0042545: cell wall modification | 1.85E-02 |
| 102 | GO:0006396: RNA processing | 1.93E-02 |
| 103 | GO:0007623: circadian rhythm | 2.79E-02 |
| 104 | GO:0045490: pectin catabolic process | 2.79E-02 |
| 105 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.88E-02 |
| 106 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.03E-02 |
| 107 | GO:0006979: response to oxidative stress | 3.26E-02 |
| 108 | GO:0048366: leaf development | 4.28E-02 |
| 109 | GO:0044550: secondary metabolite biosynthetic process | 4.71E-02 |
| 110 | GO:0015979: photosynthesis | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 3 | GO:0022883: zinc efflux transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 5 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 6 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 7 | GO:0016851: magnesium chelatase activity | 1.51E-06 |
| 8 | GO:0008242: omega peptidase activity | 5.18E-05 |
| 9 | GO:0030941: chloroplast targeting sequence binding | 5.18E-05 |
| 10 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 5.18E-05 |
| 11 | GO:0035671: enone reductase activity | 5.18E-05 |
| 12 | GO:0034722: gamma-glutamyl-peptidase activity | 1.27E-04 |
| 13 | GO:0008883: glutamyl-tRNA reductase activity | 1.27E-04 |
| 14 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.27E-04 |
| 15 | GO:0033201: alpha-1,4-glucan synthase activity | 1.27E-04 |
| 16 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.27E-04 |
| 17 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.27E-04 |
| 18 | GO:0050307: sucrose-phosphate phosphatase activity | 2.17E-04 |
| 19 | GO:0004373: glycogen (starch) synthase activity | 2.17E-04 |
| 20 | GO:0032947: protein complex scaffold | 2.17E-04 |
| 21 | GO:0004848: ureidoglycolate hydrolase activity | 2.17E-04 |
| 22 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.17E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 3.17E-04 |
| 24 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.17E-04 |
| 25 | GO:0048027: mRNA 5'-UTR binding | 3.17E-04 |
| 26 | GO:0009011: starch synthase activity | 4.24E-04 |
| 27 | GO:0001053: plastid sigma factor activity | 4.24E-04 |
| 28 | GO:0051861: glycolipid binding | 4.24E-04 |
| 29 | GO:0016987: sigma factor activity | 4.24E-04 |
| 30 | GO:0052793: pectin acetylesterase activity | 4.24E-04 |
| 31 | GO:0008237: metallopeptidase activity | 4.31E-04 |
| 32 | GO:0004623: phospholipase A2 activity | 5.39E-04 |
| 33 | GO:0004784: superoxide dismutase activity | 6.60E-04 |
| 34 | GO:0004559: alpha-mannosidase activity | 7.87E-04 |
| 35 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.87E-04 |
| 36 | GO:0052689: carboxylic ester hydrolase activity | 9.06E-04 |
| 37 | GO:0016621: cinnamoyl-CoA reductase activity | 9.18E-04 |
| 38 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.20E-03 |
| 39 | GO:0000155: phosphorelay sensor kinase activity | 2.19E-03 |
| 40 | GO:0051536: iron-sulfur cluster binding | 2.96E-03 |
| 41 | GO:0001046: core promoter sequence-specific DNA binding | 2.96E-03 |
| 42 | GO:0004176: ATP-dependent peptidase activity | 3.37E-03 |
| 43 | GO:0003727: single-stranded RNA binding | 4.03E-03 |
| 44 | GO:0047134: protein-disulfide reductase activity | 4.26E-03 |
| 45 | GO:0008080: N-acetyltransferase activity | 4.72E-03 |
| 46 | GO:0005355: glucose transmembrane transporter activity | 4.96E-03 |
| 47 | GO:0050662: coenzyme binding | 4.96E-03 |
| 48 | GO:0004791: thioredoxin-disulfide reductase activity | 4.96E-03 |
| 49 | GO:0016853: isomerase activity | 4.96E-03 |
| 50 | GO:0010181: FMN binding | 4.96E-03 |
| 51 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.46E-03 |
| 52 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.97E-03 |
| 53 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.88E-03 |
| 54 | GO:0003924: GTPase activity | 8.97E-03 |
| 55 | GO:0004222: metalloendopeptidase activity | 9.06E-03 |
| 56 | GO:0050897: cobalt ion binding | 9.36E-03 |
| 57 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 9.36E-03 |
| 58 | GO:0050661: NADP binding | 1.09E-02 |
| 59 | GO:0043621: protein self-association | 1.26E-02 |
| 60 | GO:0015293: symporter activity | 1.30E-02 |
| 61 | GO:0005198: structural molecule activity | 1.30E-02 |
| 62 | GO:0016887: ATPase activity | 1.39E-02 |
| 63 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.47E-02 |
| 64 | GO:0016298: lipase activity | 1.51E-02 |
| 65 | GO:0045330: aspartyl esterase activity | 1.58E-02 |
| 66 | GO:0003777: microtubule motor activity | 1.58E-02 |
| 67 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.77E-02 |
| 68 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.77E-02 |
| 69 | GO:0030599: pectinesterase activity | 1.81E-02 |
| 70 | GO:0015035: protein disulfide oxidoreductase activity | 1.93E-02 |
| 71 | GO:0019843: rRNA binding | 2.22E-02 |
| 72 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.26E-02 |
| 73 | GO:0005507: copper ion binding | 2.28E-02 |
| 74 | GO:0015144: carbohydrate transmembrane transporter activity | 2.52E-02 |
| 75 | GO:0005525: GTP binding | 2.63E-02 |
| 76 | GO:0046910: pectinesterase inhibitor activity | 2.66E-02 |
| 77 | GO:0005351: sugar:proton symporter activity | 2.75E-02 |
| 78 | GO:0008194: UDP-glycosyltransferase activity | 3.03E-02 |
| 79 | GO:0016757: transferase activity, transferring glycosyl groups | 3.05E-02 |
| 80 | GO:0005506: iron ion binding | 3.18E-02 |
| 81 | GO:0042802: identical protein binding | 3.31E-02 |
| 82 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 83 | GO:0016788: hydrolase activity, acting on ester bonds | 3.86E-02 |
| 84 | GO:0050660: flavin adenine dinucleotide binding | 4.23E-02 |
| 85 | GO:0061630: ubiquitin protein ligase activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.93E-10 |
| 2 | GO:0031969: chloroplast membrane | 8.43E-05 |
| 3 | GO:0045254: pyruvate dehydrogenase complex | 1.27E-04 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.85E-04 |
| 5 | GO:0010007: magnesium chelatase complex | 2.17E-04 |
| 6 | GO:0005759: mitochondrial matrix | 3.11E-04 |
| 7 | GO:0030286: dynein complex | 4.24E-04 |
| 8 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 4.24E-04 |
| 9 | GO:0009534: chloroplast thylakoid | 5.69E-04 |
| 10 | GO:0031359: integral component of chloroplast outer membrane | 9.18E-04 |
| 11 | GO:0009501: amyloplast | 1.06E-03 |
| 12 | GO:0042644: chloroplast nucleoid | 1.35E-03 |
| 13 | GO:0010287: plastoglobule | 2.20E-03 |
| 14 | GO:0005875: microtubule associated complex | 2.76E-03 |
| 15 | GO:0043234: protein complex | 2.76E-03 |
| 16 | GO:0009941: chloroplast envelope | 3.39E-03 |
| 17 | GO:0005739: mitochondrion | 5.67E-03 |
| 18 | GO:0009570: chloroplast stroma | 6.07E-03 |
| 19 | GO:0010319: stromule | 6.49E-03 |
| 20 | GO:0009295: nucleoid | 6.49E-03 |
| 21 | GO:0009707: chloroplast outer membrane | 8.46E-03 |
| 22 | GO:0009505: plant-type cell wall | 8.64E-03 |
| 23 | GO:0048046: apoplast | 8.71E-03 |
| 24 | GO:0005618: cell wall | 9.92E-03 |
| 25 | GO:0031977: thylakoid lumen | 1.13E-02 |
| 26 | GO:0005747: mitochondrial respiratory chain complex I | 1.70E-02 |
| 27 | GO:0009706: chloroplast inner membrane | 1.89E-02 |
| 28 | GO:0009705: plant-type vacuole membrane | 2.79E-02 |
| 29 | GO:0005774: vacuolar membrane | 3.11E-02 |