GO Enrichment Analysis of Co-expressed Genes with
AT4G15900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045740: positive regulation of DNA replication | 0.00E+00 |
| 2 | GO:0048870: cell motility | 0.00E+00 |
| 3 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 4 | GO:0046085: adenosine metabolic process | 0.00E+00 |
| 5 | GO:0007163: establishment or maintenance of cell polarity | 9.09E-05 |
| 6 | GO:0006432: phenylalanyl-tRNA aminoacylation | 9.09E-05 |
| 7 | GO:0046417: chorismate metabolic process | 1.58E-04 |
| 8 | GO:0008333: endosome to lysosome transport | 1.58E-04 |
| 9 | GO:0010090: trichome morphogenesis | 2.41E-04 |
| 10 | GO:0010387: COP9 signalosome assembly | 3.14E-04 |
| 11 | GO:0000380: alternative mRNA splicing, via spliceosome | 4.01E-04 |
| 12 | GO:0030041: actin filament polymerization | 4.01E-04 |
| 13 | GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity | 4.92E-04 |
| 14 | GO:0006014: D-ribose metabolic process | 4.92E-04 |
| 15 | GO:0007050: cell cycle arrest | 6.87E-04 |
| 16 | GO:0000338: protein deneddylation | 6.87E-04 |
| 17 | GO:0000082: G1/S transition of mitotic cell cycle | 6.87E-04 |
| 18 | GO:0006281: DNA repair | 7.36E-04 |
| 19 | GO:0000028: ribosomal small subunit assembly | 7.90E-04 |
| 20 | GO:0045010: actin nucleation | 7.90E-04 |
| 21 | GO:0009585: red, far-red light phototransduction | 8.60E-04 |
| 22 | GO:0010100: negative regulation of photomorphogenesis | 8.97E-04 |
| 23 | GO:0048589: developmental growth | 1.01E-03 |
| 24 | GO:0000902: cell morphogenesis | 1.01E-03 |
| 25 | GO:0098656: anion transmembrane transport | 1.01E-03 |
| 26 | GO:0010267: production of ta-siRNAs involved in RNA interference | 1.12E-03 |
| 27 | GO:0016569: covalent chromatin modification | 1.13E-03 |
| 28 | GO:0010015: root morphogenesis | 1.36E-03 |
| 29 | GO:0009073: aromatic amino acid family biosynthetic process | 1.36E-03 |
| 30 | GO:0000398: mRNA splicing, via spliceosome | 1.38E-03 |
| 31 | GO:0010102: lateral root morphogenesis | 1.62E-03 |
| 32 | GO:0002237: response to molecule of bacterial origin | 1.76E-03 |
| 33 | GO:0000162: tryptophan biosynthetic process | 2.04E-03 |
| 34 | GO:0034976: response to endoplasmic reticulum stress | 2.04E-03 |
| 35 | GO:0042753: positive regulation of circadian rhythm | 2.04E-03 |
| 36 | GO:0006457: protein folding | 2.06E-03 |
| 37 | GO:0006406: mRNA export from nucleus | 2.18E-03 |
| 38 | GO:0010431: seed maturation | 2.48E-03 |
| 39 | GO:0016226: iron-sulfur cluster assembly | 2.64E-03 |
| 40 | GO:0006012: galactose metabolic process | 2.80E-03 |
| 41 | GO:0042147: retrograde transport, endosome to Golgi | 3.13E-03 |
| 42 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.00E-03 |
| 43 | GO:0031047: gene silencing by RNA | 4.19E-03 |
| 44 | GO:0032259: methylation | 5.45E-03 |
| 45 | GO:0048573: photoperiodism, flowering | 5.76E-03 |
| 46 | GO:0010311: lateral root formation | 6.39E-03 |
| 47 | GO:0010043: response to zinc ion | 6.83E-03 |
| 48 | GO:0048527: lateral root development | 6.83E-03 |
| 49 | GO:0000154: rRNA modification | 9.42E-03 |
| 50 | GO:0009965: leaf morphogenesis | 9.42E-03 |
| 51 | GO:0010224: response to UV-B | 1.10E-02 |
| 52 | GO:0048367: shoot system development | 1.23E-02 |
| 53 | GO:0007623: circadian rhythm | 2.02E-02 |
| 54 | GO:0008380: RNA splicing | 2.29E-02 |
| 55 | GO:0015031: protein transport | 2.61E-02 |
| 56 | GO:0009826: unidimensional cell growth | 2.69E-02 |
| 57 | GO:0048366: leaf development | 3.10E-02 |
| 58 | GO:0045454: cell redox homeostasis | 3.66E-02 |
| 59 | GO:0006886: intracellular protein transport | 3.74E-02 |
| 60 | GO:0009408: response to heat | 4.25E-02 |
| 61 | GO:0006397: mRNA processing | 4.38E-02 |
| 62 | GO:0008152: metabolic process | 4.55E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030623: U5 snRNA binding | 3.64E-05 |
| 2 | GO:0004048: anthranilate phosphoribosyltransferase activity | 3.64E-05 |
| 3 | GO:0004826: phenylalanine-tRNA ligase activity | 9.09E-05 |
| 4 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 9.09E-05 |
| 5 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 9.09E-05 |
| 6 | GO:0004106: chorismate mutase activity | 9.09E-05 |
| 7 | GO:0019172: glyoxalase III activity | 9.09E-05 |
| 8 | GO:0032403: protein complex binding | 1.58E-04 |
| 9 | GO:0008649: rRNA methyltransferase activity | 1.58E-04 |
| 10 | GO:0017070: U6 snRNA binding | 4.01E-04 |
| 11 | GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity | 4.92E-04 |
| 12 | GO:0004747: ribokinase activity | 5.88E-04 |
| 13 | GO:0019887: protein kinase regulator activity | 5.88E-04 |
| 14 | GO:0042162: telomeric DNA binding | 6.87E-04 |
| 15 | GO:0008143: poly(A) binding | 6.87E-04 |
| 16 | GO:0035064: methylated histone binding | 7.90E-04 |
| 17 | GO:0004034: aldose 1-epimerase activity | 7.90E-04 |
| 18 | GO:0000049: tRNA binding | 1.49E-03 |
| 19 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.62E-03 |
| 20 | GO:0031072: heat shock protein binding | 1.62E-03 |
| 21 | GO:0003714: transcription corepressor activity | 2.18E-03 |
| 22 | GO:0008514: organic anion transmembrane transporter activity | 2.96E-03 |
| 23 | GO:0003756: protein disulfide isomerase activity | 2.96E-03 |
| 24 | GO:0008168: methyltransferase activity | 3.01E-03 |
| 25 | GO:0003697: single-stranded DNA binding | 7.28E-03 |
| 26 | GO:0042393: histone binding | 7.97E-03 |
| 27 | GO:0043621: protein self-association | 9.17E-03 |
| 28 | GO:0035091: phosphatidylinositol binding | 9.17E-03 |
| 29 | GO:0000166: nucleotide binding | 1.01E-02 |
| 30 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.23E-02 |
| 31 | GO:0051082: unfolded protein binding | 1.37E-02 |
| 32 | GO:0003723: RNA binding | 1.37E-02 |
| 33 | GO:0004386: helicase activity | 1.46E-02 |
| 34 | GO:0015144: carbohydrate transmembrane transporter activity | 1.83E-02 |
| 35 | GO:0008565: protein transporter activity | 1.83E-02 |
| 36 | GO:0005351: sugar:proton symporter activity | 1.99E-02 |
| 37 | GO:0042802: identical protein binding | 2.40E-02 |
| 38 | GO:0043531: ADP binding | 2.95E-02 |
| 39 | GO:0003729: mRNA binding | 3.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097361: CIA complex | 0.00E+00 |
| 2 | GO:0005697: telomerase holoenzyme complex | 9.09E-05 |
| 3 | GO:0005956: protein kinase CK2 complex | 2.33E-04 |
| 4 | GO:0000445: THO complex part of transcription export complex | 3.14E-04 |
| 5 | GO:0005771: multivesicular body | 4.92E-04 |
| 6 | GO:0030904: retromer complex | 4.92E-04 |
| 7 | GO:0031209: SCAR complex | 4.92E-04 |
| 8 | GO:0005801: cis-Golgi network | 5.88E-04 |
| 9 | GO:0000347: THO complex | 6.87E-04 |
| 10 | GO:0005829: cytosol | 8.40E-04 |
| 11 | GO:0005763: mitochondrial small ribosomal subunit | 1.01E-03 |
| 12 | GO:0008180: COP9 signalosome | 1.01E-03 |
| 13 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.30E-03 |
| 14 | GO:0009508: plastid chromosome | 1.62E-03 |
| 15 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.43E-03 |
| 16 | GO:0071944: cell periphery | 4.37E-03 |
| 17 | GO:0009507: chloroplast | 4.47E-03 |
| 18 | GO:0009295: nucleoid | 4.75E-03 |
| 19 | GO:0005737: cytoplasm | 5.45E-03 |
| 20 | GO:0005730: nucleolus | 7.06E-03 |
| 21 | GO:0031902: late endosome membrane | 8.21E-03 |
| 22 | GO:0005856: cytoskeleton | 9.42E-03 |
| 23 | GO:0005681: spliceosomal complex | 1.20E-02 |
| 24 | GO:0010008: endosome membrane | 1.23E-02 |
| 25 | GO:0016607: nuclear speck | 1.23E-02 |
| 26 | GO:0005834: heterotrimeric G-protein complex | 1.26E-02 |
| 27 | GO:0005654: nucleoplasm | 1.58E-02 |
| 28 | GO:0005774: vacuolar membrane | 1.75E-02 |
| 29 | GO:0031969: chloroplast membrane | 3.22E-02 |
| 30 | GO:0016020: membrane | 3.82E-02 |
| 31 | GO:0043231: intracellular membrane-bounded organelle | 4.55E-02 |