co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G15130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051569: regulation of histone H3-K4 methylation	0.00E+00
2	GO:1903288: positive regulation of potassium ion import	0.00E+00
3	GO:0071475: cellular hyperosmotic salinity response	0.00E+00
4	GO:0090627: plant epidermal cell differentiation	0.00E+00
5	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
6	GO:0080021: response to benzoic acid	0.00E+00
7	GO:0010412: mannan metabolic process	0.00E+00
8	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
9	GO:0090630: activation of GTPase activity	1.50E-05
10	GO:0006351: transcription, DNA-templated	1.78E-04
11	GO:0006355: regulation of transcription, DNA-templated	2.42E-04
12	GO:1902265: abscisic acid homeostasis	3.04E-04
13	GO:0097298: regulation of nucleus size	3.04E-04
14	GO:0009865: pollen tube adhesion	3.04E-04
15	GO:0031338: regulation of vesicle fusion	3.04E-04
16	GO:0009819: drought recovery	3.09E-04
17	GO:0019760: glucosinolate metabolic process	5.13E-04
18	GO:0031407: oxylipin metabolic process	6.66E-04
19	GO:0071712: ER-associated misfolded protein catabolic process	6.66E-04
20	GO:0032527: protein exit from endoplasmic reticulum	6.66E-04
21	GO:0006898: receptor-mediated endocytosis	6.66E-04
22	GO:0015786: UDP-glucose transport	6.66E-04
23	GO:1901679: nucleotide transmembrane transport	6.66E-04
24	GO:0009873: ethylene-activated signaling pathway	7.16E-04
25	GO:0010200: response to chitin	9.65E-04
26	GO:0015783: GDP-fucose transport	1.08E-03
27	GO:0032940: secretion by cell	1.08E-03
28	GO:0080121: AMP transport	1.08E-03
29	GO:0046786: viral replication complex formation and maintenance	1.08E-03
30	GO:0044210: 'de novo' CTP biosynthetic process	1.08E-03
31	GO:0016045: detection of bacterium	1.08E-03
32	GO:0010359: regulation of anion channel activity	1.08E-03
33	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.08E-03
34	GO:0016051: carbohydrate biosynthetic process	1.20E-03
35	GO:0010371: regulation of gibberellin biosynthetic process	1.55E-03
36	GO:1901000: regulation of response to salt stress	1.55E-03
37	GO:0070301: cellular response to hydrogen peroxide	1.55E-03
38	GO:0072334: UDP-galactose transmembrane transport	1.55E-03
39	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.55E-03
40	GO:0030100: regulation of endocytosis	1.55E-03
41	GO:0080024: indolebutyric acid metabolic process	1.55E-03
42	GO:0010321: regulation of vegetative phase change	1.55E-03
43	GO:0009739: response to gibberellin	1.78E-03
44	GO:0006470: protein dephosphorylation	1.84E-03
45	GO:0009687: abscisic acid metabolic process	2.07E-03
46	GO:0046345: abscisic acid catabolic process	2.07E-03
47	GO:0015689: molybdate ion transport	2.07E-03
48	GO:0051365: cellular response to potassium ion starvation	2.07E-03
49	GO:0046355: mannan catabolic process	2.07E-03
50	GO:0022622: root system development	2.07E-03
51	GO:0071585: detoxification of cadmium ion	2.07E-03
52	GO:0015867: ATP transport	2.07E-03
53	GO:0042991: transcription factor import into nucleus	2.07E-03
54	GO:0001944: vasculature development	2.10E-03
55	GO:0032957: inositol trisphosphate metabolic process	2.65E-03
56	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	2.65E-03
57	GO:0009823: cytokinin catabolic process	2.65E-03
58	GO:0009697: salicylic acid biosynthetic process	2.65E-03
59	GO:0006461: protein complex assembly	2.65E-03
60	GO:0042631: cellular response to water deprivation	2.67E-03
61	GO:0045489: pectin biosynthetic process	2.88E-03
62	GO:0015866: ADP transport	3.27E-03
63	GO:0035435: phosphate ion transmembrane transport	3.27E-03
64	GO:0009913: epidermal cell differentiation	3.27E-03
65	GO:0047484: regulation of response to osmotic stress	3.27E-03
66	GO:1900425: negative regulation of defense response to bacterium	3.27E-03
67	GO:0010337: regulation of salicylic acid metabolic process	3.27E-03
68	GO:0048825: cotyledon development	3.31E-03
69	GO:0009955: adaxial/abaxial pattern specification	3.93E-03
70	GO:0071470: cellular response to osmotic stress	3.93E-03
71	GO:2000033: regulation of seed dormancy process	3.93E-03
72	GO:0045926: negative regulation of growth	3.93E-03
73	GO:0010016: shoot system morphogenesis	3.93E-03
74	GO:0098655: cation transmembrane transport	3.93E-03
75	GO:0080167: response to karrikin	4.06E-03
76	GO:0010047: fruit dehiscence	4.64E-03
77	GO:0010103: stomatal complex morphogenesis	4.64E-03
78	GO:0032880: regulation of protein localization	4.64E-03
79	GO:0009611: response to wounding	5.13E-03
80	GO:0009911: positive regulation of flower development	5.13E-03
81	GO:0035265: organ growth	5.39E-03
82	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	5.39E-03
83	GO:0009690: cytokinin metabolic process	5.39E-03
84	GO:0009827: plant-type cell wall modification	6.18E-03
85	GO:0006997: nucleus organization	6.18E-03
86	GO:0098656: anion transmembrane transport	7.01E-03
87	GO:0006098: pentose-phosphate shunt	7.01E-03
88	GO:0009751: response to salicylic acid	7.19E-03
89	GO:0042761: very long-chain fatty acid biosynthetic process	7.87E-03
90	GO:0016571: histone methylation	7.87E-03
91	GO:0007346: regulation of mitotic cell cycle	7.87E-03
92	GO:0009641: shade avoidance	8.77E-03
93	GO:0006949: syncytium formation	8.77E-03
94	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	8.78E-03
95	GO:0052544: defense response by callose deposition in cell wall	9.71E-03
96	GO:0008285: negative regulation of cell proliferation	9.71E-03
97	GO:0048765: root hair cell differentiation	9.71E-03
98	GO:0006631: fatty acid metabolic process	1.01E-02
99	GO:0045037: protein import into chloroplast stroma	1.07E-02
100	GO:0008283: cell proliferation	1.10E-02
101	GO:2000012: regulation of auxin polar transport	1.17E-02
102	GO:0050826: response to freezing	1.17E-02
103	GO:0018107: peptidyl-threonine phosphorylation	1.17E-02
104	GO:0042538: hyperosmotic salinity response	1.38E-02
105	GO:0010167: response to nitrate	1.38E-02
106	GO:0010030: positive regulation of seed germination	1.38E-02
107	GO:0070588: calcium ion transmembrane transport	1.38E-02
108	GO:0010025: wax biosynthetic process	1.49E-02
109	GO:0009833: plant-type primary cell wall biogenesis	1.49E-02
110	GO:0009863: salicylic acid mediated signaling pathway	1.60E-02
111	GO:0030150: protein import into mitochondrial matrix	1.60E-02
112	GO:0010187: negative regulation of seed germination	1.60E-02
113	GO:0006289: nucleotide-excision repair	1.60E-02
114	GO:2000377: regulation of reactive oxygen species metabolic process	1.60E-02
115	GO:0006979: response to oxidative stress	1.70E-02
116	GO:0043086: negative regulation of catalytic activity	1.75E-02
117	GO:0016567: protein ubiquitination	1.84E-02
118	GO:0031408: oxylipin biosynthetic process	1.84E-02
119	GO:0051321: meiotic cell cycle	1.84E-02
120	GO:0030154: cell differentiation	1.94E-02
121	GO:0080092: regulation of pollen tube growth	1.96E-02
122	GO:0010227: floral organ abscission	2.09E-02
123	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.09E-02
124	GO:0071215: cellular response to abscisic acid stimulus	2.09E-02
125	GO:0009624: response to nematode	2.11E-02
126	GO:0010584: pollen exine formation	2.22E-02
127	GO:0006284: base-excision repair	2.22E-02
128	GO:0009737: response to abscisic acid	2.32E-02
129	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.35E-02
130	GO:0070417: cellular response to cold	2.35E-02
131	GO:0008284: positive regulation of cell proliferation	2.35E-02
132	GO:0000226: microtubule cytoskeleton organization	2.48E-02
133	GO:0042335: cuticle development	2.48E-02
134	GO:0010268: brassinosteroid homeostasis	2.62E-02
135	GO:0009960: endosperm development	2.62E-02
136	GO:0009958: positive gravitropism	2.62E-02
137	GO:0006885: regulation of pH	2.62E-02
138	GO:0048868: pollen tube development	2.62E-02
139	GO:0010183: pollen tube guidance	2.90E-02
140	GO:0009749: response to glucose	2.90E-02
141	GO:0016132: brassinosteroid biosynthetic process	3.04E-02
142	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.04E-02
143	GO:0000302: response to reactive oxygen species	3.04E-02
144	GO:0006891: intra-Golgi vesicle-mediated transport	3.04E-02
145	GO:0009753: response to jasmonic acid	3.11E-02
146	GO:1901657: glycosyl compound metabolic process	3.33E-02
147	GO:0016125: sterol metabolic process	3.49E-02
148	GO:0009639: response to red or far red light	3.49E-02
149	GO:0009828: plant-type cell wall loosening	3.49E-02
150	GO:0006310: DNA recombination	3.49E-02
151	GO:0010150: leaf senescence	3.65E-02
152	GO:0045490: pectin catabolic process	3.65E-02
153	GO:0010029: regulation of seed germination	4.11E-02
154	GO:0009627: systemic acquired resistance	4.27E-02
155	GO:0006974: cellular response to DNA damage stimulus	4.27E-02
156	GO:0010468: regulation of gene expression	4.35E-02
157	GO:0016049: cell growth	4.60E-02
158	GO:0009414: response to water deprivation	4.73E-02
159	GO:0048481: plant ovule development	4.77E-02
160	GO:0071555: cell wall organization	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.57E-05
3	GO:0003883: CTP synthase activity	3.35E-05
4	GO:0043565: sequence-specific DNA binding	7.27E-05
5	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	3.04E-04
6	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	3.04E-04
7	GO:0047216: inositol 3-alpha-galactosyltransferase activity	6.66E-04
8	GO:0048531: beta-1,3-galactosyltransferase activity	6.66E-04
9	GO:0016629: 12-oxophytodienoate reductase activity	6.66E-04
10	GO:0017022: myosin binding	6.66E-04
11	GO:0044390: ubiquitin-like protein conjugating enzyme binding	6.66E-04
12	GO:0008083: growth factor activity	1.06E-03
13	GO:0005457: GDP-fucose transmembrane transporter activity	1.08E-03
14	GO:0047325: inositol tetrakisphosphate 1-kinase activity	1.08E-03
15	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	1.08E-03
16	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.08E-03
17	GO:0017108: 5'-flap endonuclease activity	1.08E-03
18	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.55E-03
19	GO:0005460: UDP-glucose transmembrane transporter activity	1.55E-03
20	GO:0016985: mannan endo-1,4-beta-mannosidase activity	2.07E-03
21	GO:0019104: DNA N-glycosylase activity	2.07E-03
22	GO:0015098: molybdate ion transmembrane transporter activity	2.07E-03
23	GO:0000993: RNA polymerase II core binding	2.07E-03
24	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	2.07E-03
25	GO:0010294: abscisic acid glucosyltransferase activity	2.65E-03
26	GO:0005459: UDP-galactose transmembrane transporter activity	2.65E-03
27	GO:0019139: cytokinin dehydrogenase activity	2.65E-03
28	GO:0080122: AMP transmembrane transporter activity	2.65E-03
29	GO:0017137: Rab GTPase binding	2.65E-03
30	GO:0015217: ADP transmembrane transporter activity	3.93E-03
31	GO:0005347: ATP transmembrane transporter activity	3.93E-03
32	GO:0016621: cinnamoyl-CoA reductase activity	4.64E-03
33	GO:0016758: transferase activity, transferring hexosyl groups	4.88E-03
34	GO:0015288: porin activity	5.39E-03
35	GO:0016209: antioxidant activity	5.39E-03
36	GO:0008375: acetylglucosaminyltransferase activity	5.72E-03
37	GO:0004722: protein serine/threonine phosphatase activity	6.14E-03
38	GO:0046910: pectinesterase inhibitor activity	6.96E-03
39	GO:0000989: transcription factor activity, transcription factor binding	7.01E-03
40	GO:0005096: GTPase activator activity	7.03E-03
41	GO:0015020: glucuronosyltransferase activity	8.77E-03
42	GO:0005543: phospholipid binding	9.71E-03
43	GO:0005262: calcium channel activity	1.17E-02
44	GO:0015114: phosphate ion transmembrane transporter activity	1.17E-02
45	GO:0015266: protein channel activity	1.17E-02
46	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.27E-02
47	GO:0008146: sulfotransferase activity	1.38E-02
48	GO:0017025: TBP-class protein binding	1.38E-02
49	GO:0003677: DNA binding	1.51E-02
50	GO:0043130: ubiquitin binding	1.60E-02
51	GO:0044212: transcription regulatory region DNA binding	1.68E-02
52	GO:0035251: UDP-glucosyltransferase activity	1.84E-02
53	GO:0061630: ubiquitin protein ligase activity	1.86E-02
54	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.93E-02
55	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.93E-02
56	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.96E-02
57	GO:0030570: pectate lyase activity	2.09E-02
58	GO:0016757: transferase activity, transferring glycosyl groups	2.31E-02
59	GO:0005451: monovalent cation:proton antiporter activity	2.48E-02
60	GO:0001085: RNA polymerase II transcription factor binding	2.62E-02
61	GO:0003713: transcription coactivator activity	2.62E-02
62	GO:0015299: solute:proton antiporter activity	2.76E-02
63	GO:0010181: FMN binding	2.76E-02
64	GO:0004842: ubiquitin-protein transferase activity	2.90E-02
65	GO:0004518: nuclease activity	3.19E-02
66	GO:0015385: sodium:proton antiporter activity	3.33E-02
67	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.40E-02
68	GO:0003684: damaged DNA binding	3.49E-02
69	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.64E-02
70	GO:0016597: amino acid binding	3.79E-02
71	GO:0008194: UDP-glycosyltransferase activity	4.08E-02
72	GO:0102483: scopolin beta-glucosidase activity	4.44E-02
73	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0070382: exocytic vesicle	3.04E-04
4	GO:0030133: transport vesicle	6.66E-04
5	GO:0031357: integral component of chloroplast inner membrane	6.66E-04
6	GO:0005652: nuclear lamina	1.08E-03
7	GO:0005622: intracellular	1.25E-03
8	GO:0045177: apical part of cell	1.55E-03
9	GO:0036513: Derlin-1 retrotranslocation complex	1.55E-03
10	GO:0009527: plastid outer membrane	2.07E-03
11	GO:0016593: Cdc73/Paf1 complex	2.07E-03
12	GO:0016607: nuclear speck	3.12E-03
13	GO:0000793: condensed chromosome	3.27E-03
14	GO:0005798: Golgi-associated vesicle	3.27E-03
15	GO:0000794: condensed nuclear chromosome	4.64E-03
16	GO:0034399: nuclear periphery	5.39E-03
17	GO:0031305: integral component of mitochondrial inner membrane	5.39E-03
18	GO:0046930: pore complex	6.18E-03
19	GO:0031012: extracellular matrix	1.17E-02
20	GO:0005938: cell cortex	1.17E-02
21	GO:0005795: Golgi stack	1.38E-02
22	GO:0005769: early endosome	1.49E-02
23	GO:0005875: microtubule associated complex	1.49E-02
24	GO:0005905: clathrin-coated pit	1.84E-02
25	GO:0012505: endomembrane system	2.05E-02
26	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.22E-02
27	GO:0030136: clathrin-coated vesicle	2.35E-02
28	GO:0000139: Golgi membrane	2.80E-02
29	GO:0005634: nucleus	2.86E-02
30	GO:0031965: nuclear membrane	2.90E-02
31	GO:0031225: anchored component of membrane	3.37E-02
32	GO:0005615: extracellular space	4.08E-02
33	GO:0005667: transcription factor complex	4.27E-02
34	GO:0009707: chloroplast outer membrane	4.77E-02
35	GO:0046658: anchored component of plasma membrane	4.81E-02