Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G14570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine0.00E+00
3GO:0042817: pyridoxal metabolic process0.00E+00
4GO:0015813: L-glutamate transport0.00E+00
5GO:0009583: detection of light stimulus0.00E+00
6GO:0010343: singlet oxygen-mediated programmed cell death3.58E-09
7GO:0019343: cysteine biosynthetic process via cystathionine5.43E-06
8GO:0072387: flavin adenine dinucleotide metabolic process5.43E-06
9GO:0071266: 'de novo' L-methionine biosynthetic process5.43E-06
10GO:0019346: transsulfuration5.43E-06
11GO:0010617: circadian regulation of calcium ion oscillation1.49E-05
12GO:0099402: plant organ development1.49E-05
13GO:0006739: NADP metabolic process1.49E-05
14GO:1901529: positive regulation of anion channel activity1.49E-05
15GO:0006696: ergosterol biosynthetic process2.75E-05
16GO:1902448: positive regulation of shade avoidance2.75E-05
17GO:0006013: mannose metabolic process2.75E-05
18GO:1901672: positive regulation of systemic acquired resistance2.75E-05
19GO:0008615: pyridoxine biosynthetic process4.27E-05
20GO:1901332: negative regulation of lateral root development4.27E-05
21GO:0015729: oxaloacetate transport4.27E-05
22GO:0046653: tetrahydrofolate metabolic process4.27E-05
23GO:0006734: NADH metabolic process5.99E-05
24GO:1902347: response to strigolactone5.99E-05
25GO:0019676: ammonia assimilation cycle5.99E-05
26GO:0015743: malate transport5.99E-05
27GO:0000304: response to singlet oxygen7.90E-05
28GO:0010117: photoprotection7.90E-05
29GO:0046283: anthocyanin-containing compound metabolic process7.90E-05
30GO:0071423: malate transmembrane transport7.90E-05
31GO:0060918: auxin transport9.99E-05
32GO:0010304: PSII associated light-harvesting complex II catabolic process9.99E-05
33GO:1901371: regulation of leaf morphogenesis9.99E-05
34GO:0010019: chloroplast-nucleus signaling pathway1.22E-04
35GO:0010310: regulation of hydrogen peroxide metabolic process1.22E-04
36GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.22E-04
37GO:0051510: regulation of unidimensional cell growth1.46E-04
38GO:0009396: folic acid-containing compound biosynthetic process1.46E-04
39GO:0044030: regulation of DNA methylation1.96E-04
40GO:1900426: positive regulation of defense response to bacterium2.49E-04
41GO:0009638: phototropism2.49E-04
42GO:0035999: tetrahydrofolate interconversion2.49E-04
43GO:0043085: positive regulation of catalytic activity3.06E-04
44GO:0010075: regulation of meristem growth3.65E-04
45GO:0009785: blue light signaling pathway3.65E-04
46GO:0019253: reductive pentose-phosphate cycle3.96E-04
47GO:2000377: regulation of reactive oxygen species metabolic process4.90E-04
48GO:0006730: one-carbon metabolic process5.89E-04
49GO:0016117: carotenoid biosynthetic process6.93E-04
50GO:0010051: xylem and phloem pattern formation7.29E-04
51GO:0010087: phloem or xylem histogenesis7.29E-04
52GO:0010118: stomatal movement7.29E-04
53GO:0006814: sodium ion transport8.01E-04
54GO:0042752: regulation of circadian rhythm8.01E-04
55GO:0009646: response to absence of light8.01E-04
56GO:0015995: chlorophyll biosynthetic process1.23E-03
57GO:0018298: protein-chromophore linkage1.31E-03
58GO:0010218: response to far red light1.40E-03
59GO:0009637: response to blue light1.53E-03
60GO:0009853: photorespiration1.53E-03
61GO:0006897: endocytosis1.72E-03
62GO:0010114: response to red light1.81E-03
63GO:0009640: photomorphogenesis1.81E-03
64GO:0009644: response to high light intensity1.91E-03
65GO:0009965: leaf morphogenesis1.96E-03
66GO:0006096: glycolytic process2.48E-03
67GO:0009624: response to nematode2.80E-03
68GO:0007623: circadian rhythm4.06E-03
69GO:0006508: proteolysis6.09E-03
70GO:0046777: protein autophosphorylation6.66E-03
71GO:0009408: response to heat8.33E-03
72GO:0009416: response to light stimulus1.25E-02
73GO:0055114: oxidation-reduction process1.37E-02
74GO:0009414: response to water deprivation2.02E-02
75GO:0009733: response to auxin2.24E-02
76GO:0046686: response to cadmium ion2.83E-02
77GO:0007275: multicellular organism development3.34E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0046905: phytoene synthase activity0.00E+00
3GO:0052857: NADPHX epimerase activity5.43E-06
4GO:0004123: cystathionine gamma-lyase activity5.43E-06
5GO:0046906: tetrapyrrole binding5.43E-06
6GO:0004733: pyridoxamine-phosphate oxidase activity5.43E-06
7GO:0004121: cystathionine beta-lyase activity5.43E-06
8GO:0051996: squalene synthase activity5.43E-06
9GO:0052856: NADHX epimerase activity5.43E-06
10GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.49E-05
11GO:0004618: phosphoglycerate kinase activity1.49E-05
12GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity1.49E-05
13GO:0004477: methenyltetrahydrofolate cyclohydrolase activity1.49E-05
14GO:0015367: oxoglutarate:malate antiporter activity1.49E-05
15GO:0003962: cystathionine gamma-synthase activity2.75E-05
16GO:0004180: carboxypeptidase activity2.75E-05
17GO:0004848: ureidoglycolate hydrolase activity2.75E-05
18GO:0015131: oxaloacetate transmembrane transporter activity4.27E-05
19GO:0009882: blue light photoreceptor activity4.27E-05
20GO:0005313: L-glutamate transmembrane transporter activity5.99E-05
21GO:0004559: alpha-mannosidase activity1.22E-04
22GO:0019899: enzyme binding1.46E-04
23GO:0015140: malate transmembrane transporter activity1.46E-04
24GO:0071949: FAD binding2.22E-04
25GO:0004176: ATP-dependent peptidase activity5.55E-04
26GO:0010181: FMN binding8.01E-04
27GO:0008237: metallopeptidase activity1.03E-03
28GO:0008236: serine-type peptidase activity1.27E-03
29GO:0005096: GTPase activator activity1.36E-03
30GO:0004222: metalloendopeptidase activity1.40E-03
31GO:0035091: phosphatidylinositol binding1.91E-03
32GO:0030170: pyridoxal phosphate binding3.50E-03
33GO:0046872: metal ion binding3.63E-03
34GO:0042802: identical protein binding4.79E-03
35GO:0042803: protein homodimerization activity7.44E-03
36GO:0016887: ATPase activity1.13E-02
37GO:0030246: carbohydrate binding1.54E-02
38GO:0003824: catalytic activity2.20E-02
39GO:0004672: protein kinase activity2.71E-02
40GO:0005524: ATP binding4.83E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.90E-07
2GO:0016605: PML body2.75E-05
3GO:0030140: trans-Golgi network transport vesicle9.99E-05
4GO:0009706: chloroplast inner membrane1.18E-04
5GO:0009536: plastid2.34E-04
6GO:0016604: nuclear body2.49E-04
7GO:0031969: chloroplast membrane4.06E-04
8GO:0042651: thylakoid membrane5.23E-04
9GO:0009941: chloroplast envelope1.28E-03
10GO:0005829: cytosol1.64E-03
11GO:0010287: plastoglobule3.15E-03
12GO:0005743: mitochondrial inner membrane7.92E-03
13GO:0005773: vacuole1.05E-02
14GO:0009570: chloroplast stroma1.30E-02
15GO:0009579: thylakoid1.42E-02
16GO:0009534: chloroplast thylakoid1.43E-02
17GO:0009505: plant-type cell wall2.42E-02
18GO:0009535: chloroplast thylakoid membrane3.66E-02
19GO:0005774: vacuolar membrane5.00E-02
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Gene type



Gene DE type