co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G14320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070918: production of small RNA involved in gene silencing by RNA	0.00E+00
2	GO:0090239: regulation of histone H4 acetylation	0.00E+00
3	GO:0000740: nuclear membrane fusion	0.00E+00
4	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
5	GO:0046487: glyoxylate metabolic process	0.00E+00
6	GO:1904874: positive regulation of telomerase RNA localization to Cajal body	0.00E+00
7	GO:0007530: sex determination	0.00E+00
8	GO:0006412: translation	3.14E-151
9	GO:0042254: ribosome biogenesis	1.05E-68
10	GO:0000027: ribosomal large subunit assembly	2.58E-11
11	GO:0000028: ribosomal small subunit assembly	1.38E-06
12	GO:0009735: response to cytokinin	5.42E-06
13	GO:0006626: protein targeting to mitochondrion	1.96E-05
14	GO:0009955: adaxial/abaxial pattern specification	2.64E-05
15	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	4.08E-05
16	GO:1902626: assembly of large subunit precursor of preribosome	6.55E-05
17	GO:0002181: cytoplasmic translation	6.55E-05
18	GO:0000387: spliceosomal snRNP assembly	1.42E-04
19	GO:0006820: anion transport	2.70E-04
20	GO:0009793: embryo development ending in seed dormancy	4.62E-04
21	GO:0006407: rRNA export from nucleus	6.85E-04
22	GO:1990258: histone glutamine methylation	6.85E-04
23	GO:0031120: snRNA pseudouridine synthesis	6.85E-04
24	GO:0006475: internal protein amino acid acetylation	6.85E-04
25	GO:0031118: rRNA pseudouridine synthesis	6.85E-04
26	GO:0015801: aromatic amino acid transport	6.85E-04
27	GO:0017198: N-terminal peptidyl-serine acetylation	6.85E-04
28	GO:0030490: maturation of SSU-rRNA	6.85E-04
29	GO:2001006: regulation of cellulose biosynthetic process	6.85E-04
30	GO:0000494: box C/D snoRNA 3'-end processing	6.85E-04
31	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.85E-04
32	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	6.85E-04
33	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	6.85E-04
34	GO:0032365: intracellular lipid transport	6.85E-04
35	GO:0000398: mRNA splicing, via spliceosome	1.22E-03
36	GO:0022900: electron transport chain	1.24E-03
37	GO:0006432: phenylalanyl-tRNA aminoacylation	1.48E-03
38	GO:0045905: positive regulation of translational termination	1.48E-03
39	GO:0071668: plant-type cell wall assembly	1.48E-03
40	GO:0045901: positive regulation of translational elongation	1.48E-03
41	GO:0045041: protein import into mitochondrial intermembrane space	1.48E-03
42	GO:0098656: anion transmembrane transport	1.48E-03
43	GO:0048569: post-embryonic animal organ development	1.48E-03
44	GO:0043981: histone H4-K5 acetylation	1.48E-03
45	GO:0006452: translational frameshifting	1.48E-03
46	GO:0010198: synergid death	1.48E-03
47	GO:0009245: lipid A biosynthetic process	1.48E-03
48	GO:0006414: translational elongation	1.69E-03
49	GO:0010267: production of ta-siRNAs involved in RNA interference	1.75E-03
50	GO:1904278: positive regulation of wax biosynthetic process	2.44E-03
51	GO:0009150: purine ribonucleotide metabolic process	2.44E-03
52	GO:0045793: positive regulation of cell size	2.44E-03
53	GO:0060145: viral gene silencing in virus induced gene silencing	2.44E-03
54	GO:0042256: mature ribosome assembly	2.44E-03
55	GO:0010452: histone H3-K36 methylation	2.44E-03
56	GO:0070919: production of siRNA involved in chromatin silencing by small RNA	2.44E-03
57	GO:0006228: UTP biosynthetic process	3.54E-03
58	GO:0006164: purine nucleotide biosynthetic process	3.54E-03
59	GO:0006168: adenine salvage	3.54E-03
60	GO:0009558: embryo sac cellularization	3.54E-03
61	GO:0032877: positive regulation of DNA endoreduplication	3.54E-03
62	GO:0046836: glycolipid transport	3.54E-03
63	GO:0007004: telomere maintenance via telomerase	3.54E-03
64	GO:0006166: purine ribonucleoside salvage	3.54E-03
65	GO:0070301: cellular response to hydrogen peroxide	3.54E-03
66	GO:0051085: chaperone mediated protein folding requiring cofactor	3.54E-03
67	GO:0006241: CTP biosynthetic process	3.54E-03
68	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.54E-03
69	GO:0006165: nucleoside diphosphate phosphorylation	3.54E-03
70	GO:0009651: response to salt stress	3.75E-03
71	GO:0009165: nucleotide biosynthetic process	4.78E-03
72	GO:0051781: positive regulation of cell division	4.78E-03
73	GO:0042274: ribosomal small subunit biogenesis	4.78E-03
74	GO:0010387: COP9 signalosome assembly	4.78E-03
75	GO:0006183: GTP biosynthetic process	4.78E-03
76	GO:0010363: regulation of plant-type hypersensitive response	4.78E-03
77	GO:0006621: protein retention in ER lumen	4.78E-03
78	GO:0030150: protein import into mitochondrial matrix	4.88E-03
79	GO:0006406: mRNA export from nucleus	4.88E-03
80	GO:0006289: nucleotide-excision repair	4.88E-03
81	GO:0009116: nucleoside metabolic process	4.88E-03
82	GO:0044209: AMP salvage	6.15E-03
83	GO:0031167: rRNA methylation	6.15E-03
84	GO:0051568: histone H3-K4 methylation	7.64E-03
85	GO:0000470: maturation of LSU-rRNA	7.64E-03
86	GO:0043248: proteasome assembly	7.64E-03
87	GO:0045040: protein import into mitochondrial outer membrane	7.64E-03
88	GO:0008283: cell proliferation	7.89E-03
89	GO:0006413: translational initiation	8.77E-03
90	GO:0000413: protein peptidyl-prolyl isomerization	9.08E-03
91	GO:0009965: leaf morphogenesis	9.16E-03
92	GO:0006458: 'de novo' protein folding	9.24E-03
93	GO:0009554: megasporogenesis	9.24E-03
94	GO:1901001: negative regulation of response to salt stress	9.24E-03
95	GO:0000911: cytokinesis by cell plate formation	9.24E-03
96	GO:0042026: protein refolding	9.24E-03
97	GO:0010197: polar nucleus fusion	9.80E-03
98	GO:0006511: ubiquitin-dependent protein catabolic process	1.03E-02
99	GO:0035196: production of miRNAs involved in gene silencing by miRNA	1.10E-02
100	GO:0032880: regulation of protein localization	1.10E-02
101	GO:0000338: protein deneddylation	1.10E-02
102	GO:0010183: pollen tube guidance	1.13E-02
103	GO:0046686: response to cadmium ion	1.14E-02
104	GO:0051603: proteolysis involved in cellular protein catabolic process	1.21E-02
105	GO:0009690: cytokinin metabolic process	1.28E-02
106	GO:0050821: protein stabilization	1.28E-02
107	GO:0001522: pseudouridine synthesis	1.28E-02
108	GO:0010204: defense response signaling pathway, resistance gene-independent	1.47E-02
109	GO:0044030: regulation of DNA methylation	1.47E-02
110	GO:0009808: lignin metabolic process	1.47E-02
111	GO:0001510: RNA methylation	1.47E-02
112	GO:0006189: 'de novo' IMP biosynthetic process	1.67E-02
113	GO:0048589: developmental growth	1.67E-02
114	GO:0009060: aerobic respiration	1.67E-02
115	GO:0010449: root meristem growth	1.88E-02
116	GO:0016441: posttranscriptional gene silencing	2.10E-02
117	GO:0015770: sucrose transport	2.33E-02
118	GO:0048229: gametophyte development	2.33E-02
119	GO:0010015: root morphogenesis	2.33E-02
120	GO:0006913: nucleocytoplasmic transport	2.33E-02
121	GO:0016925: protein sumoylation	2.57E-02
122	GO:0006790: sulfur compound metabolic process	2.57E-02
123	GO:0010102: lateral root morphogenesis	2.81E-02
124	GO:0010628: positive regulation of gene expression	2.81E-02
125	GO:2000028: regulation of photoperiodism, flowering	2.81E-02
126	GO:0006446: regulation of translational initiation	3.07E-02
127	GO:0048467: gynoecium development	3.07E-02
128	GO:0010020: chloroplast fission	3.07E-02
129	GO:0015031: protein transport	3.86E-02
130	GO:0006487: protein N-linked glycosylation	3.87E-02
131	GO:0009644: response to high light intensity	4.08E-02
132	GO:0009409: response to cold	4.37E-02
133	GO:0003333: amino acid transmembrane transport	4.44E-02
134	GO:0051260: protein homooligomerization	4.44E-02
135	GO:0010431: seed maturation	4.44E-02
136	GO:0061077: chaperone-mediated protein folding	4.44E-02
137	GO:0006306: DNA methylation	4.44E-02
138	GO:0008380: RNA splicing	4.48E-02
139	GO:0007005: mitochondrion organization	4.73E-02
140	GO:0016226: iron-sulfur cluster assembly	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0034513: box H/ACA snoRNA binding	0.00E+00
2	GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity	0.00E+00
3	GO:0003735: structural constituent of ribosome	1.05E-192
4	GO:0003729: mRNA binding	1.86E-33
5	GO:0019843: rRNA binding	4.42E-17
6	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.08E-05
7	GO:0015288: porin activity	5.92E-05
8	GO:0004298: threonine-type endopeptidase activity	7.34E-05
9	GO:0008308: voltage-gated anion channel activity	8.21E-05
10	GO:0008097: 5S rRNA binding	1.36E-04
11	GO:0001055: RNA polymerase II activity	1.42E-04
12	GO:0001054: RNA polymerase I activity	2.22E-04
13	GO:0001056: RNA polymerase III activity	2.70E-04
14	GO:0003723: RNA binding	4.56E-04
15	GO:0031177: phosphopantetheine binding	4.84E-04
16	GO:0000035: acyl binding	6.40E-04
17	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	6.85E-04
18	GO:1990190: peptide-glutamate-N-acetyltransferase activity	6.85E-04
19	GO:0005080: protein kinase C binding	6.85E-04
20	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	6.85E-04
21	GO:1990259: histone-glutamine methyltransferase activity	6.85E-04
22	GO:0035614: snRNA stem-loop binding	6.85E-04
23	GO:0000824: inositol tetrakisphosphate 3-kinase activity	6.85E-04
24	GO:1990189: peptide-serine-N-acetyltransferase activity	6.85E-04
25	GO:0047326: inositol tetrakisphosphate 5-kinase activity	6.85E-04
26	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	7.34E-04
27	GO:0030515: snoRNA binding	8.18E-04
28	GO:0043022: ribosome binding	1.01E-03
29	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.01E-03
30	GO:0003746: translation elongation factor activity	1.05E-03
31	GO:0030619: U1 snRNA binding	1.48E-03
32	GO:0015173: aromatic amino acid transmembrane transporter activity	1.48E-03
33	GO:0070034: telomerase RNA binding	1.48E-03
34	GO:0032934: sterol binding	1.48E-03
35	GO:0004826: phenylalanine-tRNA ligase activity	1.48E-03
36	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.48E-03
37	GO:0008233: peptidase activity	2.20E-03
38	GO:0044183: protein binding involved in protein folding	2.38E-03
39	GO:0070181: small ribosomal subunit rRNA binding	2.44E-03
40	GO:0008649: rRNA methyltransferase activity	2.44E-03
41	GO:0070180: large ribosomal subunit rRNA binding	2.44E-03
42	GO:0005047: signal recognition particle binding	2.44E-03
43	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.46E-03
44	GO:0015266: protein channel activity	3.10E-03
45	GO:0003999: adenine phosphoribosyltransferase activity	3.54E-03
46	GO:0004550: nucleoside diphosphate kinase activity	3.54E-03
47	GO:0047627: adenylylsulfatase activity	3.54E-03
48	GO:0017089: glycolipid transporter activity	3.54E-03
49	GO:0004749: ribose phosphate diphosphokinase activity	3.54E-03
50	GO:0004576: oligosaccharyl transferase activity	4.78E-03
51	GO:0010011: auxin binding	4.78E-03
52	GO:0051861: glycolipid binding	4.78E-03
53	GO:0046923: ER retention sequence binding	4.78E-03
54	GO:0070628: proteasome binding	4.78E-03
55	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.15E-03
56	GO:0005275: amine transmembrane transporter activity	6.15E-03
57	GO:0031386: protein tag	6.15E-03
58	GO:0031593: polyubiquitin binding	7.64E-03
59	GO:0051920: peroxiredoxin activity	9.24E-03
60	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.61E-03
61	GO:0042162: telomeric DNA binding	1.10E-02
62	GO:0004872: receptor activity	1.13E-02
63	GO:0016209: antioxidant activity	1.28E-02
64	GO:0051082: unfolded protein binding	1.81E-02
65	GO:0008515: sucrose transmembrane transporter activity	2.33E-02
66	GO:0008794: arsenate reductase (glutaredoxin) activity	2.33E-02
67	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.33E-02
68	GO:0004129: cytochrome-c oxidase activity	2.33E-02
69	GO:0000049: tRNA binding	2.57E-02
70	GO:0050897: cobalt ion binding	2.67E-02
71	GO:0031072: heat shock protein binding	2.81E-02
72	GO:0003725: double-stranded RNA binding	2.81E-02
73	GO:0051119: sugar transmembrane transporter activity	3.33E-02
74	GO:0051536: iron-sulfur cluster binding	3.87E-02
75	GO:0043130: ubiquitin binding	3.87E-02
76	GO:0003743: translation initiation factor activity	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0072589: box H/ACA scaRNP complex	0.00E+00
2	GO:0043186: P granule	0.00E+00
3	GO:0005675: holo TFIIH complex	0.00E+00
4	GO:0090661: box H/ACA telomerase RNP complex	0.00E+00
5	GO:0097361: CIA complex	0.00E+00
6	GO:0005840: ribosome	1.12E-134
7	GO:0022626: cytosolic ribosome	2.93E-117
8	GO:0022625: cytosolic large ribosomal subunit	5.94E-116
9	GO:0022627: cytosolic small ribosomal subunit	3.38E-81
10	GO:0005737: cytoplasm	4.72E-40
11	GO:0005829: cytosol	2.28E-36
12	GO:0005730: nucleolus	7.10E-36
13	GO:0009506: plasmodesma	5.58E-20
14	GO:0015934: large ribosomal subunit	1.36E-18
15	GO:0005774: vacuolar membrane	1.89E-18
16	GO:0016020: membrane	3.53E-12
17	GO:0015935: small ribosomal subunit	6.60E-11
18	GO:0005773: vacuole	1.16E-09
19	GO:0000419: DNA-directed RNA polymerase V complex	1.66E-06
20	GO:0000502: proteasome complex	8.96E-06
21	GO:0005618: cell wall	9.87E-06
22	GO:0005665: DNA-directed RNA polymerase II, core complex	1.48E-05
23	GO:0005750: mitochondrial respiratory chain complex III	2.55E-05
24	GO:0005732: small nucleolar ribonucleoprotein complex	3.58E-05
25	GO:0005853: eukaryotic translation elongation factor 1 complex	6.55E-05
26	GO:0005839: proteasome core complex	7.34E-05
27	GO:0046930: pore complex	8.21E-05
28	GO:0005742: mitochondrial outer membrane translocase complex	8.21E-05
29	GO:0005736: DNA-directed RNA polymerase I complex	1.10E-04
30	GO:0005666: DNA-directed RNA polymerase III complex	1.42E-04
31	GO:0015030: Cajal body	1.42E-04
32	GO:0005886: plasma membrane	1.97E-04
33	GO:0019013: viral nucleocapsid	3.23E-04
34	GO:0009507: chloroplast	6.10E-04
35	GO:0030686: 90S preribosome	6.85E-04
36	GO:0005741: mitochondrial outer membrane	7.54E-04
37	GO:0031415: NatA complex	1.48E-03
38	GO:0005697: telomerase holoenzyme complex	1.48E-03
39	GO:0035145: exon-exon junction complex	1.48E-03
40	GO:0005685: U1 snRNP	1.48E-03
41	GO:0071011: precatalytic spliceosome	1.75E-03
42	GO:0000418: DNA-directed RNA polymerase IV complex	2.05E-03
43	GO:0071013: catalytic step 2 spliceosome	2.38E-03
44	GO:0034719: SMN-Sm protein complex	2.44E-03
45	GO:0000439: core TFIIH complex	2.44E-03
46	GO:0005681: spliceosomal complex	3.18E-03
47	GO:0033180: proton-transporting V-type ATPase, V1 domain	3.54E-03
48	GO:1990726: Lsm1-7-Pat1 complex	3.54E-03
49	GO:0031429: box H/ACA snoRNP complex	3.54E-03
50	GO:0005753: mitochondrial proton-transporting ATP synthase complex	3.93E-03
51	GO:0000445: THO complex part of transcription export complex	4.78E-03
52	GO:0016593: Cdc73/Paf1 complex	4.78E-03
53	GO:0005682: U5 snRNP	4.78E-03
54	GO:0005758: mitochondrial intermembrane space	4.88E-03
55	GO:0070469: respiratory chain	5.39E-03
56	GO:0008250: oligosaccharyltransferase complex	6.15E-03
57	GO:0005687: U4 snRNP	6.15E-03
58	GO:0097526: spliceosomal tri-snRNP complex	6.15E-03
59	GO:0005746: mitochondrial respiratory chain	6.15E-03
60	GO:0031428: box C/D snoRNP complex	7.64E-03
61	GO:0005762: mitochondrial large ribosomal subunit	9.24E-03
62	GO:0005801: cis-Golgi network	9.24E-03
63	GO:0005689: U12-type spliceosomal complex	9.24E-03
64	GO:0016272: prefoldin complex	9.24E-03
65	GO:0000347: THO complex	1.10E-02
66	GO:0071004: U2-type prespliceosome	1.28E-02
67	GO:0045273: respiratory chain complex II	1.28E-02
68	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	1.28E-02
69	GO:0005688: U6 snRNP	1.28E-02
70	GO:0019773: proteasome core complex, alpha-subunit complex	1.47E-02
71	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.47E-02
72	GO:0005747: mitochondrial respiratory chain complex I	1.49E-02
73	GO:0009536: plastid	1.53E-02
74	GO:0008180: COP9 signalosome	1.67E-02
75	GO:0005686: U2 snRNP	2.10E-02
76	GO:0005740: mitochondrial envelope	2.10E-02
77	GO:0005654: nucleoplasm	2.33E-02
78	GO:0048471: perinuclear region of cytoplasm	2.33E-02
79	GO:0005852: eukaryotic translation initiation factor 3 complex	2.33E-02
80	GO:0008541: proteasome regulatory particle, lid subcomplex	2.33E-02
81	GO:0031307: integral component of mitochondrial outer membrane	2.57E-02
82	GO:0032040: small-subunit processome	2.57E-02
83	GO:0009508: plastid chromosome	2.81E-02
84	GO:0005769: early endosome	3.60E-02
85	GO:0045271: respiratory chain complex I	4.15E-02
86	GO:0005622: intracellular	4.42E-02