co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G13750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090070: positive regulation of ribosome biogenesis	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:0006364: rRNA processing	1.77E-09
4	GO:0010501: RNA secondary structure unwinding	5.84E-07
5	GO:0000469: cleavage involved in rRNA processing	1.77E-05
6	GO:0030490: maturation of SSU-rRNA	1.77E-05
7	GO:0043985: histone H4-R3 methylation	1.77E-05
8	GO:0048825: cotyledon development	7.35E-05
9	GO:0045604: regulation of epidermal cell differentiation	8.18E-05
10	GO:0042254: ribosome biogenesis	1.00E-04
11	GO:0006479: protein methylation	1.69E-04
12	GO:0048444: floral organ morphogenesis	3.27E-04
13	GO:0010077: maintenance of inflorescence meristem identity	3.27E-04
14	GO:0045995: regulation of embryonic development	3.84E-04
15	GO:0001522: pseudouridine synthesis	4.43E-04
16	GO:0009553: embryo sac development	4.95E-04
17	GO:2000024: regulation of leaf development	5.68E-04
18	GO:0006349: regulation of gene expression by genetic imprinting	6.32E-04
19	GO:0010582: floral meristem determinacy	8.38E-04
20	GO:0009451: RNA modification	8.79E-04
21	GO:2000012: regulation of auxin polar transport	9.08E-04
22	GO:0010030: positive regulation of seed germination	1.06E-03
23	GO:0009561: megagametogenesis	1.63E-03
24	GO:0006606: protein import into nucleus	1.81E-03
25	GO:0009960: endosperm development	1.90E-03
26	GO:0000910: cytokinesis	2.70E-03
27	GO:0051301: cell division	4.48E-03
28	GO:0006260: DNA replication	5.34E-03
29	GO:0006417: regulation of translation	6.17E-03
30	GO:0009790: embryo development	9.56E-03
31	GO:0007166: cell surface receptor signaling pathway	1.18E-02
32	GO:0007049: cell cycle	1.58E-02
33	GO:0048366: leaf development	1.64E-02
34	GO:0045892: negative regulation of transcription, DNA-templated	1.96E-02
35	GO:0009555: pollen development	3.39E-02

Rank	GO Term	Adjusted P value
1	GO:0004004: ATP-dependent RNA helicase activity	2.24E-08
2	GO:0008026: ATP-dependent helicase activity	4.47E-07
3	GO:0003723: RNA binding	1.19E-06
4	GO:0000166: nucleotide binding	3.85E-05
5	GO:0004519: endonuclease activity	2.56E-04
6	GO:0043022: ribosome binding	4.43E-04
7	GO:0001054: RNA polymerase I activity	7.68E-04
8	GO:0004521: endoribonuclease activity	8.38E-04
9	GO:0003887: DNA-directed DNA polymerase activity	1.13E-03
10	GO:0005096: GTPase activator activity	3.47E-03
11	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.06E-03
12	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.75E-03
13	GO:0005525: GTP binding	6.74E-03
14	GO:0004386: helicase activity	7.79E-03
15	GO:0008168: methyltransferase activity	1.42E-02
16	GO:0005524: ATP binding	1.51E-02
17	GO:0003676: nucleic acid binding	3.43E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0032153: cell division site	0.00E+00
3	GO:0005634: nucleus	1.74E-06
4	GO:0030688: preribosome, small subunit precursor	1.77E-05
5	GO:0005730: nucleolus	3.37E-05
6	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.12E-04
7	GO:0005736: DNA-directed RNA polymerase I complex	5.68E-04
8	GO:0043234: protein complex	1.13E-03
9	GO:0009504: cell plate	2.09E-03
10	GO:0031965: nuclear membrane	2.09E-03
11	GO:0005819: spindle	4.19E-03
12	GO:0005635: nuclear envelope	6.03E-03
13	GO:0009524: phragmoplast	8.90E-03
14	GO:0009506: plasmodesma	3.01E-02