GO Enrichment Analysis of Co-expressed Genes with
AT4G13170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007530: sex determination | 0.00E+00 |
| 2 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 3 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 4 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 5 | GO:0015822: ornithine transport | 0.00E+00 |
| 6 | GO:0006412: translation | 4.11E-144 |
| 7 | GO:0042254: ribosome biogenesis | 3.57E-60 |
| 8 | GO:0000027: ribosomal large subunit assembly | 1.83E-11 |
| 9 | GO:0000028: ribosomal small subunit assembly | 1.38E-08 |
| 10 | GO:0006626: protein targeting to mitochondrion | 1.66E-05 |
| 11 | GO:0009735: response to cytokinin | 2.08E-05 |
| 12 | GO:0009955: adaxial/abaxial pattern specification | 2.31E-05 |
| 13 | GO:1902626: assembly of large subunit precursor of preribosome | 5.94E-05 |
| 14 | GO:0002181: cytoplasmic translation | 5.94E-05 |
| 15 | GO:0000387: spliceosomal snRNP assembly | 1.26E-04 |
| 16 | GO:0006820: anion transport | 2.41E-04 |
| 17 | GO:0009651: response to salt stress | 5.47E-04 |
| 18 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.48E-04 |
| 19 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 6.48E-04 |
| 20 | GO:0006407: rRNA export from nucleus | 6.48E-04 |
| 21 | GO:0006475: internal protein amino acid acetylation | 6.48E-04 |
| 22 | GO:0015801: aromatic amino acid transport | 6.48E-04 |
| 23 | GO:0017198: N-terminal peptidyl-serine acetylation | 6.48E-04 |
| 24 | GO:0000066: mitochondrial ornithine transport | 6.48E-04 |
| 25 | GO:0030490: maturation of SSU-rRNA | 6.48E-04 |
| 26 | GO:2001006: regulation of cellulose biosynthetic process | 6.48E-04 |
| 27 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.48E-04 |
| 28 | GO:0000398: mRNA splicing, via spliceosome | 1.05E-03 |
| 29 | GO:0098656: anion transmembrane transport | 1.37E-03 |
| 30 | GO:0009245: lipid A biosynthetic process | 1.37E-03 |
| 31 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.40E-03 |
| 32 | GO:0045905: positive regulation of translational termination | 1.40E-03 |
| 33 | GO:0071668: plant-type cell wall assembly | 1.40E-03 |
| 34 | GO:0045901: positive regulation of translational elongation | 1.40E-03 |
| 35 | GO:0045041: protein import into mitochondrial intermembrane space | 1.40E-03 |
| 36 | GO:0048569: post-embryonic animal organ development | 1.40E-03 |
| 37 | GO:0043981: histone H4-K5 acetylation | 1.40E-03 |
| 38 | GO:0006452: translational frameshifting | 1.40E-03 |
| 39 | GO:0010198: synergid death | 1.40E-03 |
| 40 | GO:0009793: embryo development ending in seed dormancy | 2.03E-03 |
| 41 | GO:1904278: positive regulation of wax biosynthetic process | 2.30E-03 |
| 42 | GO:0009150: purine ribonucleotide metabolic process | 2.30E-03 |
| 43 | GO:0045793: positive regulation of cell size | 2.30E-03 |
| 44 | GO:0042256: mature ribosome assembly | 2.30E-03 |
| 45 | GO:0010452: histone H3-K36 methylation | 2.30E-03 |
| 46 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 3.35E-03 |
| 47 | GO:0006165: nucleoside diphosphate phosphorylation | 3.35E-03 |
| 48 | GO:0006228: UTP biosynthetic process | 3.35E-03 |
| 49 | GO:0006164: purine nucleotide biosynthetic process | 3.35E-03 |
| 50 | GO:0006168: adenine salvage | 3.35E-03 |
| 51 | GO:0009558: embryo sac cellularization | 3.35E-03 |
| 52 | GO:0032877: positive regulation of DNA endoreduplication | 3.35E-03 |
| 53 | GO:0006166: purine ribonucleoside salvage | 3.35E-03 |
| 54 | GO:0070301: cellular response to hydrogen peroxide | 3.35E-03 |
| 55 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.35E-03 |
| 56 | GO:0006241: CTP biosynthetic process | 3.35E-03 |
| 57 | GO:0046686: response to cadmium ion | 3.78E-03 |
| 58 | GO:0006414: translational elongation | 3.83E-03 |
| 59 | GO:0030150: protein import into mitochondrial matrix | 4.49E-03 |
| 60 | GO:0006406: mRNA export from nucleus | 4.49E-03 |
| 61 | GO:0006289: nucleotide-excision repair | 4.49E-03 |
| 62 | GO:0009116: nucleoside metabolic process | 4.49E-03 |
| 63 | GO:0006621: protein retention in ER lumen | 4.52E-03 |
| 64 | GO:0009165: nucleotide biosynthetic process | 4.52E-03 |
| 65 | GO:1900864: mitochondrial RNA modification | 4.52E-03 |
| 66 | GO:0051781: positive regulation of cell division | 4.52E-03 |
| 67 | GO:0042274: ribosomal small subunit biogenesis | 4.52E-03 |
| 68 | GO:0006183: GTP biosynthetic process | 4.52E-03 |
| 69 | GO:0010363: regulation of plant-type hypersensitive response | 4.52E-03 |
| 70 | GO:0061077: chaperone-mediated protein folding | 5.46E-03 |
| 71 | GO:0044209: AMP salvage | 5.80E-03 |
| 72 | GO:0008283: cell proliferation | 7.09E-03 |
| 73 | GO:0045040: protein import into mitochondrial outer membrane | 7.20E-03 |
| 74 | GO:0051568: histone H3-K4 methylation | 7.20E-03 |
| 75 | GO:0000470: maturation of LSU-rRNA | 7.20E-03 |
| 76 | GO:0043248: proteasome assembly | 7.20E-03 |
| 77 | GO:0006413: translational initiation | 7.72E-03 |
| 78 | GO:0009965: leaf morphogenesis | 8.23E-03 |
| 79 | GO:0000413: protein peptidyl-prolyl isomerization | 8.35E-03 |
| 80 | GO:0006511: ubiquitin-dependent protein catabolic process | 8.59E-03 |
| 81 | GO:0000911: cytokinesis by cell plate formation | 8.71E-03 |
| 82 | GO:0042026: protein refolding | 8.71E-03 |
| 83 | GO:0000054: ribosomal subunit export from nucleus | 8.71E-03 |
| 84 | GO:0006458: 'de novo' protein folding | 8.71E-03 |
| 85 | GO:0009554: megasporogenesis | 8.71E-03 |
| 86 | GO:1901001: negative regulation of response to salt stress | 8.71E-03 |
| 87 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.03E-02 |
| 88 | GO:0032880: regulation of protein localization | 1.03E-02 |
| 89 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.09E-02 |
| 90 | GO:0009690: cytokinin metabolic process | 1.20E-02 |
| 91 | GO:0009231: riboflavin biosynthetic process | 1.20E-02 |
| 92 | GO:0015031: protein transport | 1.37E-02 |
| 93 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.38E-02 |
| 94 | GO:0009808: lignin metabolic process | 1.38E-02 |
| 95 | GO:0022900: electron transport chain | 1.38E-02 |
| 96 | GO:0006189: 'de novo' IMP biosynthetic process | 1.57E-02 |
| 97 | GO:0048589: developmental growth | 1.57E-02 |
| 98 | GO:0009060: aerobic respiration | 1.57E-02 |
| 99 | GO:0009409: response to cold | 1.59E-02 |
| 100 | GO:0010267: production of ta-siRNAs involved in RNA interference | 1.77E-02 |
| 101 | GO:0010449: root meristem growth | 1.77E-02 |
| 102 | GO:0016441: posttranscriptional gene silencing | 1.98E-02 |
| 103 | GO:0006913: nucleocytoplasmic transport | 2.20E-02 |
| 104 | GO:0048229: gametophyte development | 2.20E-02 |
| 105 | GO:0010015: root morphogenesis | 2.20E-02 |
| 106 | GO:0016925: protein sumoylation | 2.42E-02 |
| 107 | GO:0006790: sulfur compound metabolic process | 2.42E-02 |
| 108 | GO:0010102: lateral root morphogenesis | 2.65E-02 |
| 109 | GO:0010628: positive regulation of gene expression | 2.65E-02 |
| 110 | GO:2000028: regulation of photoperiodism, flowering | 2.65E-02 |
| 111 | GO:0010020: chloroplast fission | 2.89E-02 |
| 112 | GO:0006446: regulation of translational initiation | 2.89E-02 |
| 113 | GO:0048467: gynoecium development | 2.89E-02 |
| 114 | GO:0006487: protein N-linked glycosylation | 3.64E-02 |
| 115 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.73E-02 |
| 116 | GO:0009644: response to high light intensity | 3.75E-02 |
| 117 | GO:0008380: RNA splicing | 4.04E-02 |
| 118 | GO:0003333: amino acid transmembrane transport | 4.18E-02 |
| 119 | GO:0016226: iron-sulfur cluster assembly | 4.46E-02 |
| 120 | GO:0007005: mitochondrion organization | 4.46E-02 |
| 121 | GO:0040007: growth | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:0004746: riboflavin synthase activity | 0.00E+00 |
| 3 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 6.41E-182 |
| 5 | GO:0003729: mRNA binding | 5.29E-33 |
| 6 | GO:0019843: rRNA binding | 1.40E-14 |
| 7 | GO:0004298: threonine-type endopeptidase activity | 9.68E-08 |
| 8 | GO:0015288: porin activity | 5.21E-05 |
| 9 | GO:0008308: voltage-gated anion channel activity | 7.23E-05 |
| 10 | GO:0008097: 5S rRNA binding | 1.24E-04 |
| 11 | GO:0001055: RNA polymerase II activity | 1.26E-04 |
| 12 | GO:0003723: RNA binding | 1.29E-04 |
| 13 | GO:0001054: RNA polymerase I activity | 1.98E-04 |
| 14 | GO:0001056: RNA polymerase III activity | 2.41E-04 |
| 15 | GO:0031177: phosphopantetheine binding | 4.46E-04 |
| 16 | GO:0000035: acyl binding | 5.91E-04 |
| 17 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.46E-04 |
| 18 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 6.48E-04 |
| 19 | GO:0005080: protein kinase C binding | 6.48E-04 |
| 20 | GO:0035614: snRNA stem-loop binding | 6.48E-04 |
| 21 | GO:1990189: peptide-serine-N-acetyltransferase activity | 6.48E-04 |
| 22 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 7.55E-04 |
| 23 | GO:0043022: ribosome binding | 9.38E-04 |
| 24 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 9.38E-04 |
| 25 | GO:0000064: L-ornithine transmembrane transporter activity | 1.40E-03 |
| 26 | GO:0004826: phenylalanine-tRNA ligase activity | 1.40E-03 |
| 27 | GO:1990585: hydroxyproline O-arabinosyltransferase activity | 1.40E-03 |
| 28 | GO:0030619: U1 snRNA binding | 1.40E-03 |
| 29 | GO:0015173: aromatic amino acid transmembrane transporter activity | 1.40E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.73E-03 |
| 31 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.16E-03 |
| 32 | GO:0044183: protein binding involved in protein folding | 2.19E-03 |
| 33 | GO:0070181: small ribosomal subunit rRNA binding | 2.30E-03 |
| 34 | GO:0070180: large ribosomal subunit rRNA binding | 2.30E-03 |
| 35 | GO:0005047: signal recognition particle binding | 2.30E-03 |
| 36 | GO:0015266: protein channel activity | 2.86E-03 |
| 37 | GO:0003999: adenine phosphoribosyltransferase activity | 3.35E-03 |
| 38 | GO:0004550: nucleoside diphosphate kinase activity | 3.35E-03 |
| 39 | GO:0047627: adenylylsulfatase activity | 3.35E-03 |
| 40 | GO:0004749: ribose phosphate diphosphokinase activity | 3.35E-03 |
| 41 | GO:0070628: proteasome binding | 4.52E-03 |
| 42 | GO:0004576: oligosaccharyl transferase activity | 4.52E-03 |
| 43 | GO:0010011: auxin binding | 4.52E-03 |
| 44 | GO:0046923: ER retention sequence binding | 4.52E-03 |
| 45 | GO:0003746: translation elongation factor activity | 5.11E-03 |
| 46 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.80E-03 |
| 47 | GO:0005275: amine transmembrane transporter activity | 5.80E-03 |
| 48 | GO:0031386: protein tag | 5.80E-03 |
| 49 | GO:0008233: peptidase activity | 6.61E-03 |
| 50 | GO:0031593: polyubiquitin binding | 7.20E-03 |
| 51 | GO:0051920: peroxiredoxin activity | 8.71E-03 |
| 52 | GO:0008143: poly(A) binding | 1.03E-02 |
| 53 | GO:0042162: telomeric DNA binding | 1.03E-02 |
| 54 | GO:0004872: receptor activity | 1.04E-02 |
| 55 | GO:0016209: antioxidant activity | 1.20E-02 |
| 56 | GO:0035064: methylated histone binding | 1.20E-02 |
| 57 | GO:0051082: unfolded protein binding | 1.63E-02 |
| 58 | GO:0004129: cytochrome-c oxidase activity | 2.20E-02 |
| 59 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.20E-02 |
| 60 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 2.20E-02 |
| 61 | GO:0000049: tRNA binding | 2.42E-02 |
| 62 | GO:0050897: cobalt ion binding | 2.46E-02 |
| 63 | GO:0031072: heat shock protein binding | 2.65E-02 |
| 64 | GO:0003697: single-stranded DNA binding | 2.69E-02 |
| 65 | GO:0004175: endopeptidase activity | 2.89E-02 |
| 66 | GO:0051536: iron-sulfur cluster binding | 3.64E-02 |
| 67 | GO:0043130: ubiquitin binding | 3.64E-02 |
| 68 | GO:0005528: FK506 binding | 3.64E-02 |
| 69 | GO:0003743: translation initiation factor activity | 3.94E-02 |
| 70 | GO:0004540: ribonuclease activity | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097361: CIA complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 3.25E-129 |
| 5 | GO:0022626: cytosolic ribosome | 5.47E-113 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 1.26E-108 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 4.99E-74 |
| 8 | GO:0005829: cytosol | 4.41E-37 |
| 9 | GO:0005737: cytoplasm | 2.28E-35 |
| 10 | GO:0005730: nucleolus | 4.57E-33 |
| 11 | GO:0009506: plasmodesma | 5.93E-20 |
| 12 | GO:0005774: vacuolar membrane | 5.03E-19 |
| 13 | GO:0015934: large ribosomal subunit | 3.43E-17 |
| 14 | GO:0005773: vacuole | 8.93E-11 |
| 15 | GO:0016020: membrane | 3.18E-09 |
| 16 | GO:0000502: proteasome complex | 3.17E-08 |
| 17 | GO:0015935: small ribosomal subunit | 9.68E-08 |
| 18 | GO:0005839: proteasome core complex | 9.68E-08 |
| 19 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.24E-05 |
| 20 | GO:0005618: cell wall | 1.97E-05 |
| 21 | GO:0005750: mitochondrial respiratory chain complex III | 2.16E-05 |
| 22 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.79E-05 |
| 23 | GO:0000419: DNA-directed RNA polymerase V complex | 3.45E-05 |
| 24 | GO:0005853: eukaryotic translation elongation factor 1 complex | 5.94E-05 |
| 25 | GO:0005742: mitochondrial outer membrane translocase complex | 7.23E-05 |
| 26 | GO:0046930: pore complex | 7.23E-05 |
| 27 | GO:0019773: proteasome core complex, alpha-subunit complex | 7.23E-05 |
| 28 | GO:0009507: chloroplast | 9.09E-05 |
| 29 | GO:0005736: DNA-directed RNA polymerase I complex | 9.72E-05 |
| 30 | GO:0005666: DNA-directed RNA polymerase III complex | 1.26E-04 |
| 31 | GO:0019013: viral nucleocapsid | 2.89E-04 |
| 32 | GO:0030686: 90S preribosome | 6.48E-04 |
| 33 | GO:0005741: mitochondrial outer membrane | 6.79E-04 |
| 34 | GO:0005886: plasma membrane | 7.52E-04 |
| 35 | GO:0005685: U1 snRNP | 1.37E-03 |
| 36 | GO:0035145: exon-exon junction complex | 1.40E-03 |
| 37 | GO:0005697: telomerase holoenzyme complex | 1.40E-03 |
| 38 | GO:0031415: NatA complex | 1.40E-03 |
| 39 | GO:0071011: precatalytic spliceosome | 1.62E-03 |
| 40 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.89E-03 |
| 41 | GO:0071013: catalytic step 2 spliceosome | 2.19E-03 |
| 42 | GO:0048471: perinuclear region of cytoplasm | 2.19E-03 |
| 43 | GO:0034719: SMN-Sm protein complex | 2.30E-03 |
| 44 | GO:0000439: core TFIIH complex | 2.30E-03 |
| 45 | GO:0005681: spliceosomal complex | 2.80E-03 |
| 46 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 3.35E-03 |
| 47 | GO:1990726: Lsm1-7-Pat1 complex | 3.35E-03 |
| 48 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 3.62E-03 |
| 49 | GO:0005758: mitochondrial intermembrane space | 4.49E-03 |
| 50 | GO:0005682: U5 snRNP | 4.52E-03 |
| 51 | GO:0000445: THO complex part of transcription export complex | 4.52E-03 |
| 52 | GO:0016593: Cdc73/Paf1 complex | 4.52E-03 |
| 53 | GO:0070469: respiratory chain | 4.96E-03 |
| 54 | GO:0008250: oligosaccharyltransferase complex | 5.80E-03 |
| 55 | GO:0005687: U4 snRNP | 5.80E-03 |
| 56 | GO:0097526: spliceosomal tri-snRNP complex | 5.80E-03 |
| 57 | GO:0005746: mitochondrial respiratory chain | 5.80E-03 |
| 58 | GO:0005762: mitochondrial large ribosomal subunit | 8.71E-03 |
| 59 | GO:0005801: cis-Golgi network | 8.71E-03 |
| 60 | GO:0005689: U12-type spliceosomal complex | 8.71E-03 |
| 61 | GO:0016272: prefoldin complex | 8.71E-03 |
| 62 | GO:0000347: THO complex | 1.03E-02 |
| 63 | GO:0071004: U2-type prespliceosome | 1.20E-02 |
| 64 | GO:0045273: respiratory chain complex II | 1.20E-02 |
| 65 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 1.20E-02 |
| 66 | GO:0005688: U6 snRNP | 1.20E-02 |
| 67 | GO:0005747: mitochondrial respiratory chain complex I | 1.34E-02 |
| 68 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.38E-02 |
| 69 | GO:0005763: mitochondrial small ribosomal subunit | 1.57E-02 |
| 70 | GO:0005788: endoplasmic reticulum lumen | 1.72E-02 |
| 71 | GO:0015030: Cajal body | 1.77E-02 |
| 72 | GO:0005686: U2 snRNP | 1.98E-02 |
| 73 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.20E-02 |
| 74 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.20E-02 |
| 75 | GO:0031307: integral component of mitochondrial outer membrane | 2.42E-02 |
| 76 | GO:0009508: plastid chromosome | 2.65E-02 |
| 77 | GO:0005759: mitochondrial matrix | 2.89E-02 |
| 78 | GO:0005769: early endosome | 3.39E-02 |
| 79 | GO:0005743: mitochondrial inner membrane | 3.67E-02 |
| 80 | GO:0045271: respiratory chain complex I | 3.91E-02 |
| 81 | GO:0005739: mitochondrion | 3.93E-02 |