co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080183: response to photooxidative stress	1.65E-05
2	GO:0042754: negative regulation of circadian rhythm	1.65E-05
3	GO:1901562: response to paraquat	3.04E-05
4	GO:0007568: aging	4.39E-05
5	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.72E-05
6	GO:0010148: transpiration	4.72E-05
7	GO:0006508: proteolysis	9.17E-05
8	GO:0051603: proteolysis involved in cellular protein catabolic process	9.56E-05
9	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.10E-04
10	GO:0010189: vitamin E biosynthetic process	1.34E-04
11	GO:0050790: regulation of catalytic activity	1.60E-04
12	GO:0006955: immune response	1.60E-04
13	GO:0006102: isocitrate metabolic process	1.86E-04
14	GO:0015996: chlorophyll catabolic process	2.14E-04
15	GO:0048574: long-day photoperiodism, flowering	2.14E-04
16	GO:0010206: photosystem II repair	2.43E-04
17	GO:0010205: photoinhibition	2.72E-04
18	GO:0009723: response to ethylene	4.32E-04
19	GO:0042752: regulation of circadian rhythm	8.70E-04
20	GO:0010027: thylakoid membrane organization	1.20E-03
21	GO:0006099: tricarboxylic acid cycle	1.72E-03
22	GO:0007623: circadian rhythm	4.43E-03
23	GO:0009739: response to gibberellin	4.79E-03
24	GO:0009658: chloroplast organization	5.98E-03
25	GO:0009651: response to salt stress	7.58E-03
26	GO:0032259: methylation	8.84E-03
27	GO:0009751: response to salicylic acid	9.02E-03
28	GO:0009753: response to jasmonic acid	9.57E-03
29	GO:0008152: metabolic process	9.75E-03
30	GO:0045893: positive regulation of transcription, DNA-templated	1.51E-02
31	GO:0009414: response to water deprivation	2.22E-02
32	GO:0006979: response to oxidative stress	2.27E-02
33	GO:0009733: response to auxin	2.45E-02
34	GO:0009409: response to cold	2.80E-02
35	GO:0046686: response to cadmium ion	3.10E-02
36	GO:0007275: multicellular organism development	3.66E-02
37	GO:0009737: response to abscisic acid	3.87E-02
38	GO:0009793: embryo development ending in seed dormancy	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
2	GO:0016783: sulfurtransferase activity	6.06E-06
3	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	6.06E-06
4	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	6.06E-06
5	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.65E-05
6	GO:0004197: cysteine-type endopeptidase activity	1.86E-05
7	GO:0004557: alpha-galactosidase activity	3.04E-05
8	GO:0004792: thiosulfate sulfurtransferase activity	4.72E-05
9	GO:0008234: cysteine-type peptidase activity	1.03E-04
10	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.10E-04
11	GO:0004176: ATP-dependent peptidase activity	6.04E-04
12	GO:0008237: metallopeptidase activity	1.12E-03
13	GO:0008236: serine-type peptidase activity	1.38E-03
14	GO:0004222: metalloendopeptidase activity	1.52E-03
15	GO:0051287: NAD binding	2.25E-03
16	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.22E-03
17	GO:0000287: magnesium ion binding	5.91E-03
18	GO:0016887: ATPase activity	1.24E-02
19	GO:0044212: transcription regulatory region DNA binding	2.25E-02
20	GO:0003824: catalytic activity	2.41E-02
21	GO:0004672: protein kinase activity	2.97E-02
22	GO:0016787: hydrolase activity	3.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005764: lysosome	3.51E-06
2	GO:0005615: extracellular space	2.71E-04
3	GO:0005773: vacuole	1.76E-03
4	GO:0005747: mitochondrial respiratory chain complex I	2.76E-03
5	GO:0005739: mitochondrion	2.80E-03
6	GO:0010287: plastoglobule	3.43E-03
7	GO:0005759: mitochondrial matrix	4.16E-03
8	GO:0005777: peroxisome	1.51E-02
9	GO:0009579: thylakoid	1.55E-02
10	GO:0009534: chloroplast thylakoid	1.56E-02
11	GO:0009505: plant-type cell wall	2.65E-02
12	GO:0005576: extracellular region	3.70E-02
13	GO:0009535: chloroplast thylakoid membrane	4.01E-02
14	GO:0009507: chloroplast	4.51E-02