co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043609: regulation of carbon utilization	1.91E-06
2	GO:0006430: lysyl-tRNA aminoacylation	1.91E-06
3	GO:0080009: mRNA methylation	5.40E-06
4	GO:0031538: negative regulation of anthocyanin metabolic process	5.40E-06
5	GO:0043967: histone H4 acetylation	1.62E-05
6	GO:0071329: cellular response to sucrose stimulus	1.62E-05
7	GO:0043248: proteasome assembly	3.99E-05
8	GO:0006413: translational initiation	4.92E-05
9	GO:0043966: histone H3 acetylation	4.94E-05
10	GO:0006368: transcription elongation from RNA polymerase II promoter	5.95E-05
11	GO:0010928: regulation of auxin mediated signaling pathway	7.04E-05
12	GO:0035265: organ growth	7.04E-05
13	GO:2000024: regulation of leaf development	9.36E-05
14	GO:0006352: DNA-templated transcription, initiation	1.32E-04
15	GO:0008284: positive regulation of cell proliferation	3.15E-04
16	GO:0010501: RNA secondary structure unwinding	3.32E-04
17	GO:0030163: protein catabolic process	4.37E-04
18	GO:0008283: cell proliferation	8.33E-04
19	GO:0009640: photomorphogenesis	8.33E-04
20	GO:0046686: response to cadmium ion	9.27E-04
21	GO:0010468: regulation of gene expression	2.04E-03
22	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.41E-03
23	GO:0009734: auxin-activated signaling pathway	4.60E-03
24	GO:0009908: flower development	5.03E-03
25	GO:0009738: abscisic acid-activated signaling pathway	5.27E-03
26	GO:0006511: ubiquitin-dependent protein catabolic process	6.67E-03
27	GO:0006979: response to oxidative stress	8.86E-03
28	GO:0007275: multicellular organism development	1.42E-02
29	GO:0009737: response to abscisic acid	1.50E-02
30	GO:0009793: embryo development ending in seed dormancy	1.59E-02
31	GO:0006508: proteolysis	1.95E-02
32	GO:0009651: response to salt stress	2.08E-02
33	GO:0006412: translation	2.85E-02

Rank	GO Term	Adjusted P value
1	GO:0004824: lysine-tRNA ligase activity	1.91E-06
2	GO:0030371: translation repressor activity	1.91E-06
3	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.91E-06
4	GO:0000993: RNA polymerase II core binding	2.32E-05
5	GO:0003743: translation initiation factor activity	6.38E-05
6	GO:0004402: histone acetyltransferase activity	3.32E-04
7	GO:0008375: acetylglucosaminyltransferase activity	5.49E-04
8	GO:0004004: ATP-dependent RNA helicase activity	5.68E-04
9	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.88E-04
10	GO:0008236: serine-type peptidase activity	5.88E-04
11	GO:0003729: mRNA binding	8.89E-04
12	GO:0005198: structural molecule activity	8.97E-04
13	GO:0008026: ATP-dependent helicase activity	1.31E-03
14	GO:0004386: helicase activity	1.34E-03
15	GO:0005515: protein binding	2.45E-03
16	GO:0000166: nucleotide binding	5.40E-03
17	GO:0003824: catalytic activity	9.40E-03
18	GO:0016787: hydrolase activity	1.51E-02
19	GO:0016757: transferase activity, transferring glycosyl groups	2.10E-02
20	GO:0003723: RNA binding	3.81E-02
21	GO:0005524: ATP binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0036396: MIS complex	0.00E+00
2	GO:0008023: transcription elongation factor complex	1.91E-06
3	GO:0033588: Elongator holoenzyme complex	1.62E-05
4	GO:0031597: cytosolic proteasome complex	4.94E-05
5	GO:0000123: histone acetyltransferase complex	5.95E-05
6	GO:0008180: COP9 signalosome	9.36E-05
7	GO:0005829: cytosol	1.11E-04
8	GO:0005852: eukaryotic translation initiation factor 3 complex	1.32E-04
9	GO:0008541: proteasome regulatory particle, lid subcomplex	1.32E-04
10	GO:0009506: plasmodesma	9.13E-04
11	GO:0000502: proteasome complex	1.01E-03
12	GO:0016607: nuclear speck	1.14E-03
13	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.58E-03
14	GO:0005737: cytoplasm	3.16E-03
15	GO:0005774: vacuolar membrane	2.13E-02
16	GO:0005886: plasma membrane	4.36E-02