GO Enrichment Analysis of Co-expressed Genes with
AT4G11260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.34E-13 |
| 3 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 1.17E-04 |
| 4 | GO:0006882: cellular zinc ion homeostasis | 1.17E-04 |
| 5 | GO:0001676: long-chain fatty acid metabolic process | 1.17E-04 |
| 6 | GO:0010387: COP9 signalosome assembly | 1.61E-04 |
| 7 | GO:0045116: protein neddylation | 2.09E-04 |
| 8 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.59E-04 |
| 9 | GO:0019509: L-methionine salvage from methylthioadenosine | 3.11E-04 |
| 10 | GO:0009612: response to mechanical stimulus | 3.11E-04 |
| 11 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.49E-04 |
| 12 | GO:0000338: protein deneddylation | 3.66E-04 |
| 13 | GO:0010100: negative regulation of photomorphogenesis | 4.82E-04 |
| 14 | GO:0006526: arginine biosynthetic process | 4.82E-04 |
| 15 | GO:0010093: specification of floral organ identity | 4.82E-04 |
| 16 | GO:0046685: response to arsenic-containing substance | 5.42E-04 |
| 17 | GO:0071577: zinc II ion transmembrane transport | 6.04E-04 |
| 18 | GO:0010072: primary shoot apical meristem specification | 7.34E-04 |
| 19 | GO:0016925: protein sumoylation | 8.01E-04 |
| 20 | GO:0071732: cellular response to nitric oxide | 1.01E-03 |
| 21 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.39E-03 |
| 22 | GO:0071369: cellular response to ethylene stimulus | 1.47E-03 |
| 23 | GO:0046686: response to cadmium ion | 1.83E-03 |
| 24 | GO:0010193: response to ozone | 2.09E-03 |
| 25 | GO:0030163: protein catabolic process | 2.28E-03 |
| 26 | GO:0071281: cellular response to iron ion | 2.28E-03 |
| 27 | GO:0016579: protein deubiquitination | 2.57E-03 |
| 28 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.99E-03 |
| 29 | GO:0010043: response to zinc ion | 3.53E-03 |
| 30 | GO:0030001: metal ion transport | 4.11E-03 |
| 31 | GO:0006631: fatty acid metabolic process | 4.23E-03 |
| 32 | GO:0009640: photomorphogenesis | 4.47E-03 |
| 33 | GO:0009926: auxin polar transport | 4.47E-03 |
| 34 | GO:0031347: regulation of defense response | 5.09E-03 |
| 35 | GO:0006486: protein glycosylation | 5.48E-03 |
| 36 | GO:0009585: red, far-red light phototransduction | 5.48E-03 |
| 37 | GO:0009733: response to auxin | 8.68E-03 |
| 38 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.11E-02 |
| 39 | GO:0006508: proteolysis | 2.39E-02 |
| 40 | GO:0006414: translational elongation | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046522: S-methyl-5-thioribose kinase activity | 0.00E+00 |
| 2 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 3 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 4 | GO:0004298: threonine-type endopeptidase activity | 1.38E-17 |
| 5 | GO:0008233: peptidase activity | 2.21E-11 |
| 6 | GO:0019781: NEDD8 activating enzyme activity | 4.35E-05 |
| 7 | GO:0008237: metallopeptidase activity | 9.77E-05 |
| 8 | GO:0008641: small protein activating enzyme activity | 2.09E-04 |
| 9 | GO:0031386: protein tag | 2.09E-04 |
| 10 | GO:0031593: polyubiquitin binding | 2.59E-04 |
| 11 | GO:0036402: proteasome-activating ATPase activity | 2.59E-04 |
| 12 | GO:0102391: decanoate--CoA ligase activity | 3.11E-04 |
| 13 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.66E-04 |
| 14 | GO:0008417: fucosyltransferase activity | 5.42E-04 |
| 15 | GO:0017025: TBP-class protein binding | 1.01E-03 |
| 16 | GO:0004190: aspartic-type endopeptidase activity | 1.01E-03 |
| 17 | GO:0005385: zinc ion transmembrane transporter activity | 1.16E-03 |
| 18 | GO:0043130: ubiquitin binding | 1.16E-03 |
| 19 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.31E-03 |
| 20 | GO:0046873: metal ion transmembrane transporter activity | 1.82E-03 |
| 21 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 2.09E-03 |
| 22 | GO:0003746: translation elongation factor activity | 3.76E-03 |
| 23 | GO:0022857: transmembrane transporter activity | 6.70E-03 |
| 24 | GO:0004252: serine-type endopeptidase activity | 8.79E-03 |
| 25 | GO:0042802: identical protein binding | 1.21E-02 |
| 26 | GO:0046982: protein heterodimerization activity | 1.37E-02 |
| 27 | GO:0004722: protein serine/threonine phosphatase activity | 1.97E-02 |
| 28 | GO:0016887: ATPase activity | 2.92E-02 |
| 29 | GO:0000166: nucleotide binding | 3.22E-02 |
| 30 | GO:0005516: calmodulin binding | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005839: proteasome core complex | 1.38E-17 |
| 2 | GO:0000502: proteasome complex | 3.57E-16 |
| 3 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.93E-11 |
| 4 | GO:0019774: proteasome core complex, beta-subunit complex | 1.67E-05 |
| 5 | GO:0046861: glyoxysomal membrane | 7.77E-05 |
| 6 | GO:0005829: cytosol | 1.32E-04 |
| 7 | GO:0031597: cytosolic proteasome complex | 3.11E-04 |
| 8 | GO:0031595: nuclear proteasome complex | 3.66E-04 |
| 9 | GO:0022626: cytosolic ribosome | 4.17E-04 |
| 10 | GO:0009514: glyoxysome | 4.82E-04 |
| 11 | GO:0008180: COP9 signalosome | 5.42E-04 |
| 12 | GO:0008540: proteasome regulatory particle, base subcomplex | 6.04E-04 |
| 13 | GO:0005634: nucleus | 9.40E-04 |
| 14 | GO:0032580: Golgi cisterna membrane | 2.38E-03 |
| 15 | GO:0005737: cytoplasm | 2.39E-03 |
| 16 | GO:0005819: spindle | 3.99E-03 |
| 17 | GO:0005774: vacuolar membrane | 5.03E-03 |
| 18 | GO:0005802: trans-Golgi network | 6.12E-03 |
| 19 | GO:0005768: endosome | 6.96E-03 |
| 20 | GO:0009524: phragmoplast | 8.47E-03 |
| 21 | GO:0005794: Golgi apparatus | 1.07E-02 |
| 22 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.49E-02 |
| 23 | GO:0005777: peroxisome | 3.55E-02 |
| 24 | GO:0005773: vacuole | 4.12E-02 |